CK939755
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP18_ARATH (Expansin-A18 OS=Arabidopsis thaliana GN=EXPA18 PE=2 SV=1) HSP 1 Score: 228.409 bits (581), Expect = 3.136e-59 Identity = 117/243 (48.15%), Postives = 152/243 (62.55%), Query Frame = 1 Query: 55 CVGFLSLVS----SVQGYGG--WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYNVAPPNWSFGQTY 732 C+ LS+++ S+ Y G W A ATFY YGN+Y GYG T ALSTALFN G +CG CFQ+ C + P C GS +VTATN CPP GGWC+PP HFDL++P F IA ++AGI+PV YRRV CK+ GGIRF G+ Y+ LV + NVGG GD+ +++KGSRT W MS NWG ++Q+ S L GQSLSF +T+ + ++ +YN AP +WS G+TY Sbjct: 9 CLVILSMMAMIGTSMATYAGTPWRTASATFYGDDTGSATMGGACGYGNMYDSGYGVATTALSTALFNEGYACGQCFQLKCVSSPN-CYYGSPATVVTATNICPPNYGQASNNGGWCNPPRVHFDLTKPAFMKIANWKAGIIPVSYRRVACKKIGGIRFKFEGNGYWLLVYVMNVGGPGDIKTMAVKGSRTGWINMSHNWGASYQAFSSLYGQSLSFRLTSYTTRQTIYAYNAAPASWSAGKTY 250
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP21_ARATH (Expansin-A21 OS=Arabidopsis thaliana GN=EXPA21 PE=2 SV=3) HSP 1 Score: 226.098 bits (575), Expect = 1.556e-58 Identity = 119/242 (49.17%), Postives = 152/242 (62.81%), Query Frame = 1 Query: 34 MALW-VILCVGFLSLVSSVQGYGG----WINAHATFYXXXXXXXXXXXXXX-YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGG-WCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738 MA W + + + V++ G G W +A A +Y YG+L GYG TAALSTALFN+G SCGAC++IMC+ +PQ CL GSI +TAT+ CPPG WC PN HFDLS P+F IAQ +A +VPV YRRV C + GG++F + G+ +L NVGGAGD+ AVS KGS+T W MSR WGQNW +N L GQS+S VTTS+G + +V P +W FGQT+ G Sbjct: 17 MATWFMFISYSHGANVAAAPGTNGLDTAWYDARAAYYGDIHGGGTELEGACGYGDLNKHGYGLATAALSTALFNSGASCGACYEIMCSPNPQGCLSGSIKITATDLCPPGSAWCYLPNKHFDLSLPMFIKIAQVKAKMVPVRYRRVPCAKTGGVKFEVKGNPNILTILPYNVGGAGDIIAVSAKGSKTAWVVMSRYWGQNWTTNVNLTGQSVSLRVTTSDGITKDFTDVMPASWGFGQTFDG 258
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP10_ORYSJ (Expansin-A10 OS=Oryza sativa subsp. japonica GN=EXPA10 PE=2 SV=2) HSP 1 Score: 224.172 bits (570), Expect = 5.914e-58 Identity = 108/221 (48.87%), Postives = 143/221 (64.71%), Query Frame = 1 Query: 103 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRG-SIIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738 W +A A++Y +G+L GYG T LSTALF G +CG C+++ C +D ++CL G SI+VTATNFC P GG C+PPNHHF L F+ IA ++AG++P+ YRRV C R+GG+RF + G S+F VLI+NVGGAGDV +V IKG+ + W M RNWGQ W NS GQ LSF +T+S+G ++ +YNV P W FG+TYTG Sbjct: 33 WRSAKASYYAADPEDAIGGACG-FGDLGKHGYGMATVGLSTALFERGAACGGCYEVKCVDDLKYCLPGTSIVVTATNFCAPNFGLPADAGGVCNPPNHHFLLPIQSFEKIALWKAGVMPIQYRRVNCLRDGGVRFAVAGRSFFLTVLISNVGGAGDVRSVKIKGTESGWLSMGRNWGQIWHINSDFRGQPLSFELTSSDGKTLTNYNVVPKEWDFGKTYTG 252
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP20_ORYSJ (Expansin-A20 OS=Oryza sativa subsp. japonica GN=EXPA20 PE=2 SV=1) HSP 1 Score: 220.32 bits (560), Expect = 8.540e-57 Identity = 105/214 (49.07%), Postives = 141/214 (65.89%), Query Frame = 1 Query: 103 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMC--ANDPQWCLRG-SIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYT 735 W+ ATFY YGNLY Q YG N AALST LFN+G SCG C+ I+C P WC G +I VT TN+ GGWC+ +FD+SQP +++I Y AGIVP++Y++V+C R GG+RF ING +YF LVL+TN+ G+G + ++S+KGS T W M+RNWG NWQ + L GQ+LSF VT++ G ++V + P WSFGQT++ Sbjct: 23 WLPGTATFYGGADGSGTMGGACGYGNLYDQRYGINNAALSTPLFNDGASCGQCYLIICDYGKAPDWCKLGKAITVTGTNY---GGWCNATRPYFDMSQPAWENIGIYSAGIVPILYQQVKCWRYGGVRFIINGFNYFELVLVTNMAGSGSIVSMSVKGSCTGWIQMTRNWGANWQCLAGLAGQALSFNVTSTGGQTIVFDDAVPAGWSFGQTFS 233
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP16_ORYSJ (Expansin-A16 OS=Oryza sativa subsp. japonica GN=EXPA16 PE=2 SV=1) HSP 1 Score: 217.624 bits (553), Expect = 5.536e-56 Identity = 105/199 (52.76%), Postives = 133/199 (66.83%), Query Frame = 1 Query: 172 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738 YG+L YG TA +S ALF G +CG C+++ C N WCLRGS ++VTAT+FC P GGWC+ P HF++S+ F +A+ +A IVPV +RRV C R GG+RFTI G + F VLITNV G+V AV +KGSRT W PM RNWGQNWQ ++ L GQ LSF VT G +VV+Y+VAPP+W F QT+ G Sbjct: 57 YGDLDIFRYGRYTAGVSGALFGRGSACGGCYEVRCVNHVLWCLRGSPTVVVTATDFCAPNLGLSDDYGGWCNFPKEHFEMSEAAFLRVAKAKADIVPVQFRRVSCDRAGGMRFTITGGASFLQVLITNVAADGEVAAVKVKGSRTGWIPMGRNWGQNWQCDADLRGQPLSFEVTGGRGRTVVAYSVAPPDWMFAQTFEG 255
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP20_ARATH (Expansin-A20 OS=Arabidopsis thaliana GN=EXPA20 PE=2 SV=1) HSP 1 Score: 215.312 bits (547), Expect = 2.747e-55 Identity = 102/199 (51.26%), Postives = 132/199 (66.33%), Query Frame = 1 Query: 172 YGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTYTG 738 YG+L + +A LS LFN G SCGAC ++ C N +WCL+GS ++VTAT+FCPP GGWC+ P H +LS F IA+ RA ++P+ YRRV+C R GG+RF+++G S+F VLI+NVG G+V V +KG T W PM+RNWGQNW S+ L GQSLSF VT G ++ SY+VAPP W FG TY G Sbjct: 53 YGDLRQSSFAGYSAGLSGKLFNRGSSCGACLEVRCVNHIRWCLQGSPSVVVTATDFCPPNSGLSSDYGGWCNFPKEHLELSHAAFTGIAETRAEMIPIQYRRVKCGRRGGLRFSLSGSSHFFQVLISNVGLDGEVVGVKVKGHTTAWIPMARNWGQNWHSSLDLIGQSLSFEVTLKGGKTIASYDVAPPYWRFGMTYQG 251
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 214.157 bits (544), Expect = 6.120e-55 Identity = 109/224 (48.66%), Postives = 138/224 (61.61%), Query Frame = 1 Query: 103 WINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP----------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK-GSRTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTT-SNGHSVVSYNVAPPNWSFGQTY 732 W AHATFY YGNLY+ GYGT+TAALST LF +G CG C+Q+ C C RGS I VTATN CPP GGWC+PP HFDLS+P F +A +RAGIVPV+YRRV C R GG+RF + G+ Y+ L + NV GAGDV + +K G W MS NWG ++Q+ + L GQ+LSF VT+ + G ++++ V P +W FG TY Sbjct: 37 WTPAHATFYGDETASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTAS-CYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMADWRAGIVPVMYRRVPCARAGGLRFALQGNPYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFKVTSYTTGQTILAAGVTPASWCFGLTY 259
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP26_ORYSJ (Expansin-A26 OS=Oryza sativa subsp. japonica GN=EXPA26 PE=2 SV=1) HSP 1 Score: 176.792 bits (447), Expect = 1.083e-43 Identity = 90/217 (41.47%), Postives = 131/217 (60.37%), Query Frame = 1 Query: 97 GGWINAHATFYXXXXXXXXXXXXXXYGNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPN----HHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIKGS-RTRWQPMSRNWGQNWQSNSYLNGQSLSFVVTTSNGHSVVSYNVAPPNWSFGQTY 732 G W++ HATFY G + GYG TAA+S ALF+NG CGAC+++ + +++VTATN PP P N HFDL+ P F IA+ + G+VPV YR+V C R GGI++TI G+ +N+V++ NVGGAGDV +++KG+ R +W P+ R+WGQ W++ + L G+SL+F V T + S+ VAP +W++ TY Sbjct: 80 GPWVDGHATFYGGRDASGTTEGGAC-GYKDADGYGAMTAAVSPALFDNGAGCGACYELKGDSGK------TVVVTATNQAPP-----PVNGMKGEHFDLTMPAFLSIAEEKLGVVPVSYRKVACVRQGGIKYTITGNPSYNMVMVKNVGGAGDVVKLTVKGTKRVKWTPLQRSWGQLWKTEANLTGESLTFRVMTGDHRKATSWRVAPRDWTYDNTY 284
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXP17_ORYSJ (Expansin-A17 OS=Oryza sativa subsp. japonica GN=EXPA17 PE=2 SV=2) HSP 1 Score: 162.925 bits (411), Expect = 1.618e-39 Identity = 85/196 (43.37%), Postives = 116/196 (59.18%), Query Frame = 1 Query: 196 YGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGS--IIVTATNFCPP--------GGWCDPPNHHFDLSQPVFQHIAQYRAGIVPVIYRRVRCKRNGGIRFTINGHSYFNLVLITNVGGAGDVHAVSIK--GSRTRWQPMSRNWGQNWQSNSYL-NGQSLSFVVTT--SNGHSVVSYNVAPPNWSFGQTYTG 738 Y T TAALST LF +G CG C+++ C P WC GS +++T TN CPP GGWC+PP HHFD++ P F +AQ AGIVPV YRRV C+R GG+RF + G+ Y+ L+ + NVGGAGDV ++S+K G W + NWG +Q + L N L+ +TT + +++ + P W G Y G Sbjct: 85 YSTKTAALSTPLFADGNGCGQCYELRCVKSP-WCNPGSPSVVITGTNLCPPNWYLPNDDGGWCNPPRHHFDMAPPSFLKLAQRVAGIVPVQYRRVPCQRTGGVRFCLQGNHYWLLLYVMNVGGAGDVSSLSVKTSGGGGAWIQAAHNWGITYQVFAALDNSDGLTVKLTTYSTPQQTIIVSDAISPWWITGLCYQG 279
BLAST of CK939755 vs. ExPASy Swiss-Prot
Match: EXB14_ORYSJ (Putative expansin-B14 OS=Oryza sativa subsp. japonica GN=EXPB14 PE=3 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 6.830e-22 Identity = 77/257 (29.96%), Postives = 117/257 (45.53%), Query Frame = 1 Query: 34 MALWVILCVGFLSLVSSVQGY---GGWINAHATFYXXXXXXXXXXXXXXY-GNLYSQGYGTNTAALSTALFNNGLSCGACFQIMCANDPQWCLRGSIIVTATNFCPPGGWCDPPNHHFDLSQPVFQHIAQ-------YRAGIVPVIYRRVRCKRNG---GIRFTINGHSYFNLVLITNVGGAGDVHAVSI-----KGSRTRWQPMSRNWGQNWQSNSYLNGQS-----LSFVVTTSNGHSVVSYNVAPPNWSFGQTY 732 +A + C S V+SV + GW AT+Y Y G++ + + AA S +++ +G CG+C+Q+ C+ +P C + V T+ C PGG C HFDLS F +A+ AG +PV Y RV CK G R + Y+ VL+ + G GD+ AV + G W M ++WG W+ NS G + +S +T+ +G ++V+ NV P W G TY Sbjct: 12 VAFVALACCVLRSSVASVDHHRKLSGWSIGGATWYGPANGSGTDGGACGYQGDVGQPPFNSMIAAGSPSIYESGKGCGSCYQVKCSGNPS-CSGKPVTVVLTDLC-PGGACLEEPVHFDLSGTAFGAMAKPGQDDQLRNAGKLPVQYARVPCKWQGVDIAFRVDAGSNQYYLAVLVEDEDGDGDLSAVDLMQSGGSGGGGSWAAMQQSWGAVWKYNS---GPAPLQAPMSIRLTSGSGRTLVASNVIPAGWQPGGTY 263 The following BLAST results are available for this feature:
BLAST of CK939755 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 89
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939755 ID=CK939755; Name=CK939755; organism=Citrus sinensis; type=EST; length=738bpback to top |