CN188355

Overview
NameCN188355
Unique NameCN188355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3979 contig Csv1_Contig3979:151..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAAC (Pyruvate kinase OS=Staphylococcus aureus (strain COL) GN=pyk PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++KD E I  +G++  +DF++ S+ R   DV + RE L +    +   +F KIEN EG+ +  EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGIDNIAEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAAB (Pyruvate kinase OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=pyk PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++KD E I  +G++  +DF++ S+ R   DV + RE L +    +   +F KIEN EG+ +  EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGIDNIAEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAA8 (Pyruvate kinase OS=Staphylococcus aureus (strain NCTC 8325) GN=pyk PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++KD E I  +G++  +DF++ S+ R   DV + RE L +    +   +F KIEN EG+ +  EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGIDNIAEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAA3 (Pyruvate kinase OS=Staphylococcus aureus (strain USA300) GN=pyk PE=3 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.899e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV--KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S ++I   + AGM+VAR +FS G+ E H+  ++ ++   K   K+ A++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V+ G  I +   L        + L+V ++     +V C I N+  L      ++   +R+ LP +++KD E I  +G++  +DF++ S+ R   DV + RE L +    +   +F KIEN EG+ +  EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMIEKLINAGMNVARLNFSHGSHEEHKGRIDTIRKVAKRLDKIVAILLDTKGPEIRTHNMKDGIIELERGNEVIVSMN-EVEGTPEKFSVTYENLINDVQVGSYILLDDGL--------IELQVKDIDHAKKEVKCDILNSGELKNKK-GVNLPGVRVSLPGITEKDAEDI-RFGIKENVDFIAASFVRRPSDVLEIREILEE--QKANISVFPKIENQEGIDNIAEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_ASPNG (Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 SV=1)

HSP 1 Score: 125.561 bits (314), Expect = 3.240e-28
Identity = 85/255 (33.33%), Postives = 143/255 (56.08%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+GT+GPK+ SV+ I+    AG++V R +FS G+ +YHQ  ++N + A KT   +  A+ LDT GPE++  N   +K I +K    + +T D  Q AT+   + + +++  + K +  G  I++   + +        LEV + K   V C+  N   ++ S   ++     + LP LS+KD   +  +GV+NK+D +  S+ R   D+R  RE L + G   + QI AKIEN +G+ +FDEIL+  DG++++
Sbjct:   35 TSIIGTIGPKTNSVEKINSLRTAGLNVVRMNFSHGSYQYHQSVIDNAREAAKTQVGRPLAIALDTKGPEIRTGNTPDDKDIPIKQGHELNITTD-EQYATASDDKNMYLDYKNITKVISPGKLIYVDDGILSFEV-----LEVVDDKTIRVRCL--NNGNIS-SRKGVNLPGTDVDLPALSEKDIADL-KFGVRNKVDMVFASFIRRGSDIRHIREVLGEEG--KEIQIIAKIENQQGVNNFDEILEETDGVMVA 277          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYM_MOUSE (Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=Pkm2 PE=1 SV=4)

HSP 1 Score: 125.176 bits (313), Expect = 4.231e-28
Identity = 82/261 (31.42%), Postives = 145/261 (55.56%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSV+++   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V E   + +   ++N  +L GS   ++     + LP +S+KD + +  +GV+  +D +  S+ R A DV + R+ L + G     +I +KIEN EG+  FDEIL+A+DGI+++
Sbjct:   45 TGIICTIGPASRSVEMLKEMIKSGMNVARLNFSHGTHEYHAETIKNVREATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKEKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEASDGIMVA 293          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAES (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 12228) GN=pyk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.526e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L      ++   +++ LP ++DKD + I  +G++  +DF++ S+ R   DV   R+ L +  + ++  IF KIEN EG+ + +EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILEE--EKAEITIFPKIENQEGIDNIEEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAEQ (Pyruvate kinase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=pyk PE=3 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 5.526e-28
Identity = 77/252 (30.56%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S +++   + AGM+VAR +FS G+ E H+  ++ ++   K   K   ++LDT GPE++  N  +  I L+    V+++ +   E T +   + ++ L   V  G  I +   L        V L+V E+  +  +V C I NT  L      ++   +++ LP ++DKD + I  +G++  +DF++ S+ R   DV   R+ L +  + ++  IF KIEN EG+ + +EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMLEKLMNAGMNVARLNFSHGSHEEHKARIDTIRKVAKRLNKTIGLLLDTKGPEIRTHNMKDGLIVLEKGKEVIVSMN-EVEGTPEKFSVTYENLINDVNIGSYILLDDGL--------VELQVKEINKDKGEVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-RFGIKENVDFIAASFVRRPSDVLDIRQILEE--EKAEITIFPKIENQEGIDNIEEILEVSDGLMVA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYM_HUMAN (Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=PKM2 PE=1 SV=4)

HSP 1 Score: 124.405 bits (311), Expect = 7.217e-28
Identity = 81/261 (31.03%), Postives = 144/261 (55.17%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     + LP +S+KD + +  +GV+  +D +  S+ R A DV + R+ L + G     +I +KIEN EG+  FDEIL+A+DGI+++
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLVTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEASDGIMVA 293          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYM_PONAB (Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2 PE=2 SV=3)

HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28
Identity = 81/261 (31.03%), Postives = 144/261 (55.17%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V+ G  I++   L +        L+V +   + +   ++N  +L GS   ++     + LP +S+KD + +  +GV+  +D +  S+ R A DV + R+ L + G     +I +KIEN EG+  FDEIL+A+DGI+++
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARLNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVEVGSKIYVDDGLIS--------LQVKQKGADFLLTEVENGGSL-GSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKASDVHEVRKVLGEKG--KNIKIISKIENHEGVRRFDEILEASDGIMVA 293          
The following BLAST results are available for this feature:
BLAST of CN188355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_STAAC1.899e-2830.56Pyruvate kinase OS=Staphylococcus aureus (strain C... [more]
KPYK_STAAB1.899e-2830.56Pyruvate kinase OS=Staphylococcus aureus (strain b... [more]
KPYK_STAA81.899e-2830.56Pyruvate kinase OS=Staphylococcus aureus (strain N... [more]
KPYK_STAA31.899e-2830.56Pyruvate kinase OS=Staphylococcus aureus (strain U... [more]
KPYK_ASPNG3.240e-2833.33Pyruvate kinase OS=Aspergillus niger GN=pkiA PE=3 ... [more]
KPYM_MOUSE4.231e-2831.42Pyruvate kinase isozymes M1/M2 OS=Mus musculus GN=... [more]
KPYK_STAES5.526e-2830.56Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYK_STAEQ5.526e-2830.56Pyruvate kinase OS=Staphylococcus epidermidis (str... [more]
KPYM_HUMAN7.217e-2831.03Pyruvate kinase isozymes M1/M2 OS=Homo sapiens GN=... [more]
KPYM_PONAB9.426e-2831.03Pyruvate kinase isozyme M1 OS=Pongo abelii GN=PKM2... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188355 ID=CN188355; Name=CN188355; organism=Citrus sinensis; type=EST; length=796bp
GAGGCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAA
AATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATCCG
GTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGT
AATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAA
GACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAAT
TGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGT
TCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTT
GCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCA
TTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGG
CTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAA
TACTGCAACATTGGCTGGTTCACTTTTCACTTTACATGCCTCTCAAATTC
GTATTCAACTGCCAACTCTTTCTGATAAAGATAAGGAGGTCATTAGTTCT
TGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGTCCTATACGCGACA
TGCAGAAGACGTGCGCCAAGCTCGCGAGTATCTCTCCAAGTTGGGTGACC
TCAGTCAAACTCAAATTTTTGCAAAGATTGAGAATATAGAGGGTTTGACC
CATTTTGATGAGATCCTTCAAGCAGCAGATGGTATTATTCTTTCCC
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