CN188355

Overview
NameCN188355
Unique NameCN188355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3979 contig Csv1_Contig3979:151..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_XENLA (Pyruvate kinase muscle isozyme OS=Xenopus laevis GN=pkm PE=2 SV=1)

HSP 1 Score: 124.02 bits (310), Expect = 9.426e-28
Identity = 85/261 (32.57%), Postives = 140/261 (53.64%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTK------KLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSV+++   +K+GM++AR +FS G  EYH  T++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K VK G  I++   L +        L V E+  +     I+N   L GS   ++     + LP +S KD + +  +GV+  +D +  S+ R A DV + RE L + G     +I +KIEN EG+  FDEIL+A+DGI+++
Sbjct:   41 TGIICTIGPASRSVEMLKEMIKSGMNIARLNFSHGTHEYHAGTIKNVREATESLASNPIHYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATMRITLDDAFQENCDENVLWVDYKNLTKVVKPGSKIYVDDGLIS--------LLVKEIGPDFCVTEIENGGML-GSKKGVNLPGAAVDLPAVSSKDIQDL-QFGVEQDVDMVFASFIRKAADVHEVREVLGEKG--KNIKIISKIENHEGVRRFDEILEASDGIMVA 289          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_BACLI (Pyruvate kinase OS=Bacillus licheniformis GN=pyk PE=3 SV=1)

HSP 1 Score: 123.635 bits (309), Expect = 1.231e-27
Identity = 78/252 (30.95%), Postives = 138/252 (54.76%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGN--DVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S SV+ ++  ++AGM+VAR +FS G+ E H   ++N++ A     K   ++LDT GPE++       +I L A   ++++ D     T   + + +DGL   V  G TI +   L        V LEV+++  +  ++   + N+ TL      ++   + + LP +++KD   I  +G++  +DF++ S+ R   DV + RE L +  + +  QI  KIEN EG+ + D IL+ +DG++++
Sbjct:    4 TKIVCTIGPASESVEKLTQLMEAGMNVARLNFSHGDFEEHGARIKNIREAAGKLGKDIGILLDTKGPEIRTHTMENGSIELAAGSQLIVSMD-EVIGTPDKISVTYDGLIHDVSVGSTILLDDGL--------VGLEVTDINKDKREIVTKVMNSGTLKNKK-GVNVPGVSVNLPGITEKDANDI-VFGIEQGVDFIAASFVRRPSDVLEIRELLEE-HNAADIQIIPKIENQEGVDNIDAILEVSDGLMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_CHICK (Pyruvate kinase muscle isozyme OS=Gallus gallus GN=PKM2 PE=2 SV=2)

HSP 1 Score: 123.25 bits (308), Expect = 1.608e-27
Identity = 83/261 (31.80%), Postives = 138/261 (52.87%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSVD +   +K+GM+VAR +FS G  EYH+ T++N++ A ++      T +  A+ LDT GPE++   +       + LK   ++ +T D    +     VL +++  L K +  G  I++   L +        L V E KG D          + GS   ++     + LP +S+KD + +  +GV+  +D +  S+ R A DV   R+ L + G     +I +KIEN EG+  FDEI++A+DGI+++
Sbjct:   44 TGIICTIGPASRSVDKLKEMIKSGMNVARLNFSHGTHEYHEGTIKNVREATESFASDPITYRPVAIALDTKGPEIRTGLIKGSGTAEVELKKGAALKVTLDNAFMENCDENVLWVDYKNLIKVIDVGSKIYVDDGLIS--------LLVKE-KGKDFVMTEVENGGMLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQNVDMVFASFIRKAADVHAVRKVLGEKG--KHIKIISKIENHEGVRRFDEIMEASDGIMVA 292          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYM_RABIT (Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuniculus GN=PKM2 PE=1 SV=4)

HSP 1 Score: 122.479 bits (306), Expect = 2.742e-27
Identity = 81/261 (31.03%), Postives = 139/261 (53.26%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT------TKKLCAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLTPDCG--QEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GP SRSV+ +   +K+GM+VAR +FS G  EYH ET++N++ A ++        +  AV LDT GPE++   +       + LK   ++ +T D    ++    +L +++  + K V  G  +++   L +        L+V + KG D            GS   ++     + LP +S+KD + +  +GV+  +D +  S+ R A DV + R+ L + G     +I +KIEN EG+  FDEIL+A+DGI+++
Sbjct:   45 TGIICTIGPASRSVETLKEMIKSGMNVARMNFSHGTHEYHAETIKNVRTATESFASDPILYRPVAVALDTKGPEIRTGLIKGSGTAEVELKKGATLKITLDNAYMEKCDENILWLDYKNICKVVDVGSKVYVDDGLIS--------LQVKQ-KGPDFLVTEVENGGFLGSKKGVNLPGAAVDLPAVSEKDIQDL-KFGVEQDVDMVFASFIRKAADVHEVRKILGEKG--KNIKIISKIENHEGVRRFDEILEASDGIMVA 293          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_DROME (Pyruvate kinase OS=Drosophila melanogaster GN=PyK PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27
Identity = 80/262 (30.53%), Postives = 149/262 (56.87%), Query Frame = 1
Query:   43 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKL-----CAVMLDTVGPELQ---VVNKSEKAISLKADGSVVLT--PDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            ++ IV T+GP S SV+++   +  GM++AR +FS G+ EYH  T+ N++ AVK  + KL      A+ LDT GPE++   +       I LK    + LT   +  ++ + +++ ++++ +   VK G+ +F+   L +        L V EV  + +TC ++N  +L GS   ++   + + LP +S+KDK  +  +GV+ ++D +  S+ R+A  + + R+ L + G     +I +KIEN +G+ + DEI++A DGI+++
Sbjct:   47 LSGIVCTIGPASSSVEMLEKMMATGMNIARMNFSHGSHEYHAATVANVRQAVKNYSAKLGYEHPVAIALDTKGPEIRTGLIGGSGTAEIELKKGEKIKLTTNKEFLEKGSLEIVYVDYENIVNVVKPGNRVFVDDGLIS--------LIVREVGKDSLTCEVENGGSL-GSRKGVNLPGVPVDLPAVSEKDKSDL-LFGVEQEVDMIFASFIRNAAALTEIRKVLGEKG--KNIKIISKIENQQGMHNLDEIIEAGDGIMVA 296          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_BACSU (Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 SV=2)

HSP 1 Score: 122.094 bits (305), Expect = 3.582e-27
Identity = 75/252 (29.76%), Postives = 139/252 (55.16%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKG--NDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S+++++  +++GM+VAR +FS G+ E H   ++N++ A K   K   ++LDT GPE++        I L+    ++++ D     T+  + + ++GL   V++G TI +   L        + LEV +V     ++   + N  TL      ++   + + LP +++KD   I  +G++  +DF++ S+ R + DV + RE L +  +    QI  KIEN EG+ + D IL+ +DG++++
Sbjct:    4 TKIVCTIGPASESIEMLTKLMESGMNVARLNFSHGDFEEHGARIKNIREASKKLGKNVGILLDTKGPEIRTHTMENGGIELETGKELIISMD-EVVGTTDKISVTYEGLVHDVEQGSTILLDDGL--------IGLEVLDVDAAKREIKTKVLNNGTLKNKK-GVNVPGVSVNLPGITEKDARDI-VFGIEQGVDFIAPSFIRRSTDVLEIRELLEE-HNAQDIQIIPKIENQEGVDNIDAILEVSDGLMVA 243          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_NEUCR (Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27
Identity = 81/254 (31.89%), Postives = 135/254 (53.15%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKT-TKKLCAVMLDTVGPELQVVN-KSEKAISLKADGSVVLTPD--CGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GPK+ SV+ I+    AG++V R +FS G+ EYHQ  ++N + A K    +  A+ LDT GPE++  N K+++ I + A   + +T D     E T + + +++  + K +  G  I++   +           EV E+  +    V         S   ++     + LP LS+KDK  +  +GV+NK+D +  S+ R  +D++  RE L +  D  Q QI AKIEN +GL +F EIL   DG++++
Sbjct:   34 TSIICTIGPKTNSVEAINKLRDAGLNVVRMNFSHGSYEYHQSVIDNARQAEKVHPGRPIAIALDTKGPEIRTGNTKNDEDIPISAGTILNITTDEKYKDECTIEHMYVDYVNITKVIAPGRIIYVDDGVLA--------FEVLEIVDDKTIKVKARNNGYISSRKGVNLPNTDVDLPALSEKDKADL-RFGVKNKVDMVFASFIRRGQDIKDIREVLGE--DGKQIQIIAKIENRQGLNNFAEILAETDGVMVA 276          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_LACDE (Pyruvate kinase OS=Lactobacillus delbrueckii subsp. bulgaricus GN=pyk PE=1 SV=3)

HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27
Identity = 73/250 (29.20%), Postives = 134/250 (53.60%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP S  ++ I+   +AG +V RF+FS GN E H   +  ++   K T KL  + LDT G E++  ++     ++     + ++ D  +     ++ + + GL      G T+ I            + ++  + +  ++ C  +NT  + GS   ++A  + I+LP +++KD + I  +G+++ I+F+  S+ R A+DV   R  L +  + S  +IF KIE+ EG+ + DEILQ +DG++++
Sbjct:    4 TKIVSTLGPASDDIETITKLAEAGANVFRFNFSHGNHEEHLARMNMVREVEKKTGKLLGIALDTKGAEIRTTDQEGGKFTINTGDEIRVSMDATKAGNKDMIHVTYPGLFDDTHVGGTVLI------DDGAVGLTIKAKDEEKRELVCEAQNTGVI-GSKKGVNAPGVEIRLPGITEKDTDDI-RFGLKHGINFIFASFVRKAQDVLDIRA-LCEEANASYVKIFPKIESQEGIDNIDEILQVSDGLMVA 244          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_EMENI (Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=3 SV=2)

HSP 1 Score: 121.709 bits (304), Expect = 4.678e-27
Identity = 84/255 (32.94%), Postives = 143/255 (56.08%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVK-TTKKLCAVMLDTVGPELQVVNK-SEKAISLKADGSVVLTPDCGQEATS---QVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            T I+ T+GPK+ SV+ I+   +AG++V R +FS G+ EYHQ  +++ + A K    +  A+ LDT GPE++  N   +K I +KA   + ++ D  Q AT+   Q + +++  + K +  G  I++   + +        LEV + K   V C+  N   ++ S   ++     + LP LS+KD   +  +GV+NK+D +  S+ R   D+R  RE L + G   + QI AKIEN +G+ +FDEIL+  DG++++
Sbjct:   35 TSIICTIGPKTNSVEKINALRRAGLNVVRMNFSHGSYEYHQSVIDHAREAEKQQAGRPVAIALDTKGPEIRTGNTVGDKDIPIKAGHEMNISTD-EQYATASDDQNMYVDYKNITKVISAGKLIYVDDGILSFEV-----LEVVDDKTLRVRCL--NNGNIS-SRKGVNLPGTDVDLPALSEKDISDL-KFGVKNKVDMVFASFIRRGSDIRHIREVLGEEG--REIQIIAKIENQQGVNNFDEILEETDGVMVA 277          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_STAHJ (Pyruvate kinase OS=Staphylococcus haemolyticus (strain JCSC1435) GN=pyk PE=3 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 1.042e-26
Identity = 79/253 (31.23%), Postives = 138/253 (54.55%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEV---KGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV T+GP S S +++   +KAGM+VAR +FS G+ E H+  ++ ++       K   ++LDT GPE++  +  +  I L+  G  V+      E T +   + ++ L   V+ G  I +   L        V L+V ++   KG +V C I NT  L      ++   +++ LP ++DKD + I  +G++  +D+++ S+ R   DV   RE L +  + + T IF KIEN EG+ + +EIL+ +DG++++
Sbjct:    4 TKIVCTIGPASESEEMLEKLMKAGMNVARLNFSHGSHEEHKARIDTIRKVADRLGKTIGILLDTKGPEIRTHDMKDGLIMLE-KGKEVIVSMSQVEGTPEKFSVTYEDLINDVQVGSYILLDDGL--------VELQVKDIDKTKG-EVKCDILNTGELKNKK-GVNLPGVKVNLPGITDKDADDI-LFGIKEDVDYIAASFVRRPSDVLDIREILERENNHNIT-IFPKIENQEGIDNIEEILEVSDGLMVA 243          
The following BLAST results are available for this feature:
BLAST of CN188355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYK_XENLA9.426e-2832.57Pyruvate kinase muscle isozyme OS=Xenopus laevis G... [more]
KPYK_BACLI1.231e-2730.95Pyruvate kinase OS=Bacillus licheniformis GN=pyk P... [more]
KPYK_CHICK1.608e-2731.80Pyruvate kinase muscle isozyme OS=Gallus gallus GN... [more]
KPYM_RABIT2.742e-2731.03Pyruvate kinase isozymes M1/M2 OS=Oryctolagus cuni... [more]
KPYK_DROME3.582e-2730.53Pyruvate kinase OS=Drosophila melanogaster GN=PyK ... [more]
KPYK_BACSU3.582e-2729.76Pyruvate kinase OS=Bacillus subtilis GN=pyk PE=1 S... [more]
KPYK_NEUCR4.678e-2731.89Pyruvate kinase OS=Neurospora crassa GN=pyk-1 PE=3... [more]
KPYK_LACDE4.678e-2729.20Pyruvate kinase OS=Lactobacillus delbrueckii subsp... [more]
KPYK_EMENI4.678e-2732.94Pyruvate kinase OS=Emericella nidulans GN=pkiA PE=... [more]
KPYK_STAHJ1.042e-2631.23Pyruvate kinase OS=Staphylococcus haemolyticus (st... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005O10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188355 ID=CN188355; Name=CN188355; organism=Citrus sinensis; type=EST; length=796bp
GAGGCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAA
AATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATCCG
GTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGT
AATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAA
GACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAAT
TGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGT
TCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTT
GCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCA
TTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGG
CTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAA
TACTGCAACATTGGCTGGTTCACTTTTCACTTTACATGCCTCTCAAATTC
GTATTCAACTGCCAACTCTTTCTGATAAAGATAAGGAGGTCATTAGTTCT
TGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGTCCTATACGCGACA
TGCAGAAGACGTGCGCCAAGCTCGCGAGTATCTCTCCAAGTTGGGTGACC
TCAGTCAAACTCAAATTTTTGCAAAGATTGAGAATATAGAGGGTTTGACC
CATTTTGATGAGATCCTTCAAGCAGCAGATGGTATTATTCTTTCCC
back to top