CN188355

Overview
NameCN188355
Unique NameCN188355
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length796
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig3979 contig Csv1_Contig3979:151..946. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYG_TOBAC (Pyruvate kinase isozyme G, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.689e-19
Identity = 71/254 (27.95%), Postives = 128/254 (50.39%), Query Frame = 1
Query:   37 PAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKA-AVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            P  TKIV T+GP + S ++I    +AGM+VAR + S G+   HQ T++ +K    +   K+ A+MLDT GPE+ +     K I LK       +   G  +T   + +N+D     V+ GD + +   + +        L V     + V C + +   L  S   L+       LP++++KD + I  +GV N++DF ++S+ + A+ V + ++YL      +   +  KIE+ + + +   I+ A+DG +++
Sbjct:   90 PRKTKIVCTIGPSTSSREMIWKLAEAGMNVARLNMSHGDHASHQRTIDLVKEYNAQFEDKVIAIMLDTKGPEV-ISGDVPKPILLKEGQEFNFSIKRG-VSTEDTVSVNYDDFINDVEAGDILLVDGGMMS--------LAVKSKTSDIVKCEVIDGGELK-SRRHLNVRGKSATLPSITEKDWDDI-KFGVNNQVDFYAVSFVKDAKVVHELKDYLKSCN--ADIHVIVKIESADSIPNLHSIISASDGAMVA 329          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_CHLPN (Pyruvate kinase OS=Chlamydia pneumoniae GN=pyk PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.045e-18
Identity = 73/254 (28.74%), Postives = 129/254 (50.79%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIG----QYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKI+ T+GP + S ++++  L AGM+VAR +FS G+ E H + +  LK   +  +   A+MLDT GPE+++ N  +     +     +++ D    A   V  +   G+   V +G  + I       +   SE  S+ LE                + L  S  +L    + + LP +++KD   +  +GV+  +D ++ S+ R+ ED+   R+ L+ LG+  +  I AKIEN  G+ +F +I + ADGI+++
Sbjct:    5 TKIICTIGPATNSPEMLAKLLDAGMNVARLNFSHGSHETHGQAIGFLKELREQKRVPLAIMLDTKGPEIRLGNIPQPISVSQGQKLRLVSSDIDGSAEGGV-SLYPKGIFPFVPEGADVLIDDGYIHAVVVSSEADSLELEFM-------------NSGLLKSHKSLSIRGVDVALPFMTEKDIADL-KFGVEQNMDVVAASFVRYGEDIETMRKCLADLGN-PKMPIIAKIENRLGVENFSKIAKLADGIMIA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_CHLTR (Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE=3 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18
Identity = 76/267 (28.46%), Postives = 123/267 (46.07%), Query Frame = 1
Query:   40 AMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV--------------VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFD-GLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            A TKI+ T+GP + + +++   L AGM+VAR +FS G  E H  T+  LK   +  +   A+MLDT GPE+++              +    K I    +  V L P C      +  P+  D G  ++V       + +  F  S          E+K N                 +L    I + LP +++KD   +  +GV+ ++D ++ S+ R  ED+   R+ L   G  +   I AKIEN  G+ +F EI +AADGI+++
Sbjct:    3 ARTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREKRQVPLAIMLDTKGPEIRLGQVESPIKVQPGDRLTLVSKEILGSKESGVTLYPSCVFPYVRERAPVLIDDGYIQAVVVNAQEHMVEIEFQNS---------GEIKSNK----------------SLSIKDIDVALPFMTEKDIADLK-FGVEQELDLIAASFVRCNEDIDSMRKVLESFGRPNMP-IIAKIENHLGVQNFQEIARAADGIMIA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_CHLMU (Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.039e-18
Identity = 75/267 (28.09%), Postives = 124/267 (46.44%), Query Frame = 1
Query:   40 AMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQV--------------VNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFD-GLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            A TKI+ T+GP + + +++   L AGM+VAR +FS G  E H  T+  LK   +  +   A+MLDT GPE+++              +  + K I    +  V L P C      +  P+  D G  ++V       + +  F  S          E+K N                 +L    I + LP +++KD   +  +GV+ ++D ++ S+ R  ED+   R+ L   G  +   I AKIEN  G+ +F EI +A+DGI+++
Sbjct:    3 ARTKIICTIGPATNTPEMLEKLLDAGMNVARLNFSHGTHESHGRTIAILKELREKRQVPLAIMLDTKGPEIRLGQVESPIKVKPGDRLTLTSKEILGSKEAGVTLYPSCVFPFVRERAPVLIDDGYIQAVVVNAQEHLIEIEFQNS---------GEIKSNK----------------SLSIKDIDVALPFMTEKDITDLK-FGVEQELDLIAASFVRCNEDIDSMRKVLENFGRPNMP-IIAKIENHLGVQNFQEIAKASDGIMIA 242          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_MYCIT (Pyruvate kinase OS=Mycobacterium intracellulare GN=pyk PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 8.843e-18
Identity = 64/249 (25.70%), Postives = 121/249 (48.59%), Query Frame = 1
Query:   49 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            KIV TLGP + S ++I   ++AGM VAR +FS G+   H+   E ++ A   T +   V+ D  GP+++ + +     +  ADG  V       E +   +   +  LA+    GD + +        +   V L V  ++G+DV C +     ++ +   +    + +  P LS+KD E + ++ +   +D ++LS+ R   DV    E + ++G   +  + AK+E  E + + + I+ A D I+++
Sbjct:    6 KIVCTLGPATNSDELILALVEAGMDVARLNFSHGDYADHKAAYERVRVASDATGRAVGVLADLQGPKIR-LGRFATGPTYWADGETVRITVADCEGSHDRVSTTYKKLAEDAAVGDRVLV--------DDGKVCLVVDGIEGDDVICTVVEGGPVSNNK-GISLPGMNVSAPALSEKDIEDL-TFALDLGVDLVALSFVRSPADVELVHEVMDRVG--RRVPVIAKLEKPEAVDNLETIVLAFDAIMVA 241          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_MYCTU (Pyruvate kinase OS=Mycobacterium tuberculosis GN=pyk PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.508e-17
Identity = 62/249 (24.90%), Postives = 122/249 (49.00%), Query Frame = 1
Query:   49 KIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            KIV TLGP ++  D++   ++AGM VAR +FS G+ + H+   E ++ A   T +   V+ D  GP+++ + +     +  A+G  V       E +   +   +  LA+    GD + +        +   V L V  V+G+DV C +     ++ +   +    + +  P LS+KD E + ++ +   +D ++LS+ R   DV    E + ++G   +  + AK+E  E + + + I+ A D ++++
Sbjct:    6 KIVCTLGPATQRDDLVRALVEAGMDVARMNFSHGDYDDHKVAYERVRVASDATGRAVGVLADLQGPKIR-LGRFASGATHWAEGETVRITVGACEGSHDRVSTTYKRLAQDAVAGDRVLV--------DDGKVALVVDAVEGDDVVCTVVEGGPVSDNK-GISLPGMNVTAPALSEKDIEDL-TFALNLGVDMVALSFVRSPADVELVHEVMDRIG--RRVPVIAKLEKPEAIDNLEAIVLAFDAVMVA 241          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_CORGL (Pyruvate kinase OS=Corynebacterium glutamicum GN=pyk PE=1 SV=1)

HSP 1 Score: 89.7373 bits (221), Expect = 1.970e-17
Identity = 65/250 (26.00%), Postives = 123/250 (49.20%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP   S D I   ++ GM VAR +FS G+   H++  + ++ A + T +   ++ D  GP++++   ++ A   +   ++ +T D   E T   +   +  LAK  K GD + +        +   V L    V+GNDV C +     ++ +   +    + I +P LS+KD   +  + ++  +DF++LS+ R   D     + + + G   +  + AK+E  E +T  + I+ A D ++++
Sbjct:    5 TKIVCTLGPAVASADGILRLVEDGMDVARLNFSHGDHPDHEQNYKWVREAAEKTGRAVGILADLQGPKIRLGRFTDGATVWENGETIRITVD-DVEGTHDRVSTTYKNLAKDAKPGDRLLV--------DDGKVGLVCVSVEGNDVICEVVEGGPVSNNK-GVSLPGMDISVPALSEKDIRDL-RFALKLGVDFIALSFVRSPADAELVHKIMDEEG--RRVPVIAKLEKPEAVTSLEPIVLAFDAVMVA 241          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_BORBU (Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=3 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.573e-17
Identity = 67/251 (26.69%), Postives = 127/251 (50.60%), Query Frame = 1
Query:   43 MTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            +TKIV T+       + I     AG++V R + +    + H++T++ +    K + K+ A+M+DT GPE++  N     I    D  ++ T    +    Q    N+DG  K V +G  + I        +   + + V     + + C IKN   +     +++   I ++L ++++KDK  I      N +DF++ S+ RH++DV+  +E L+  G+    +I +KIEN EG+ + +EI +A+ GI+++
Sbjct:    5 LTKIVATISDLRCEPEHIKDLHDAGVNVIRLNTAH---QSHEDTIKVIDNVRKISNKI-ALMIDTKGPEVRTANIENPIIVKTGDKVIISTSPINEPNNFQT---NYDGFVKEVPQGSKVLI--------DDGELEMTVVAKLPDRLICEIKNDGQIKNKK-SINTPGISLKLQSVTEKDKGFIELAAKYN-VDFIAHSFVRHSKDVQDVQEILTASGN-PDVKIISKIENQEGIDNIEEIAKASYGIMVA 237          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK_COREF (Pyruvate kinase OS=Corynebacterium efficiens GN=pyk PE=3 SV=2)

HSP 1 Score: 88.5817 bits (218), Expect = 4.388e-17
Identity = 66/250 (26.40%), Postives = 121/250 (48.40%), Query Frame = 1
Query:   46 TKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLKADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            TKIV TLGP   S D I   ++ GM VAR +FS G+   H++  + ++ A   T +   ++ D  GP++++    E +   +   +V +T D   E T   +   +  LAK  + GD + +        +   V L    V+GNDV C +     ++ +   +    + I +P LS+KD + +  + ++  +DF++LS+ R   DV      + + G   +  + AK+E  E +   + I+ A D I+++
Sbjct:    5 TKIVCTLGPAVASADGILRLVQDGMDVARLNFSHGDHPDHEQNYKWVREATDKTGRAVGILADLQGPKIRLGRFKEGSTVWETGETVRITVD-DVEGTHDRVSTTYKNLAKDARPGDRLLV--------DDGKVGLVCVSVEGNDVICEVTEGGPVSNNK-GVSLPGMDISVPALSEKDIKDL-RFALKLGVDFIALSFVRSPADVELVHAIMDEEG--RRVPVIAKLEKPEAVAALESIVLAFDAIMVA 241          
BLAST of CN188355 vs. ExPASy Swiss-Prot
Match: KPYK2_SYNY3 (Pyruvate kinase 2 OS=Synechocystis sp. (strain PCC 6803) GN=pyk2 PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 9.777e-17
Identity = 60/259 (23.17%), Postives = 127/259 (49.03%), Query Frame = 1
Query:   22 KASFFPAMTKIVGTLGPKSRSVDVISGCLKAGMSVARFDFSWGNTEYHQETLENLKAAVKTTKKLCAVMLDTVGPELQVVNKSEKAISLK-ADGSVVLTPDCGQEATSQVLPINFDGLAKSVKKGDTIFIGQYLFTGSETTSVWLEVSEVKGNDVTCVIKNTATLAGSLFTLHASQIRIQLPTLSDKDKEVISSWGVQNKIDFLSLSYTRHAEDVRQAREYLSKLGDLSQTQIFAKIENIEGLTHFDEILQAADGIILS 795
            + S  P  TKIV T+GP ++S +V+   ++AG +  R +FS G+  YHQ+++  ++       +   ++ D  GP+++V      A S++  +G          E T  +  I+++ LA  V  G  I +            + +E  +    D+ C +    TL+ +   ++   + + +  ++DKDKE +  +G+   +D+++LS+ R+ +D+ + +  ++  G      + AKIE  E +     +L+  DG++++
Sbjct:    2 QTSPLPRRTKIVATIGPATQSKEVLRQLIQAGATTFRLNFSHGDHAYHQQSIRLIRQIAFELNQPVGILQDLQGPKIRVGKFLNDAGSVQLKNGDPYTLTSRPVECTETISSISYEYLADEVPSGARILL------DDGKLEMLVEEVDTVARDLHCRVIVGGTLSSNK-GVNFPGVCLSVKAMTDKDKEDL-MFGLDQGVDWVALSFVRNPQDIDEIKGLIAAAG--KSVPVIAKIEKHEAIKDMQAVLEKCDGVMVA 250          
The following BLAST results are available for this feature:
BLAST of CN188355 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 93
Match NameE-valueIdentityDescription
KPYG_TOBAC4.689e-1927.95Pyruvate kinase isozyme G, chloroplastic OS=Nicoti... [more]
KPYK_CHLPN1.045e-1828.74Pyruvate kinase OS=Chlamydia pneumoniae GN=pyk PE=... [more]
KPYK_CHLTR3.039e-1828.46Pyruvate kinase OS=Chlamydia trachomatis GN=pyk PE... [more]
KPYK_CHLMU3.039e-1828.09Pyruvate kinase OS=Chlamydia muridarum GN=pyk PE=3... [more]
KPYK_MYCIT8.843e-1825.70Pyruvate kinase OS=Mycobacterium intracellulare GN... [more]
KPYK_MYCTU1.508e-1724.90Pyruvate kinase OS=Mycobacterium tuberculosis GN=p... [more]
KPYK_CORGL1.970e-1726.00Pyruvate kinase OS=Corynebacterium glutamicum GN=p... [more]
KPYK_BORBU2.573e-1726.69Pyruvate kinase OS=Borrelia burgdorferi GN=pyk PE=... [more]
KPYK_COREF4.388e-1726.40Pyruvate kinase OS=Corynebacterium efficiens GN=py... [more]
KPYK2_SYNY39.777e-1723.17Pyruvate kinase 2 OS=Synechocystis sp. (strain PCC... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005O10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005O10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188355 ID=CN188355; Name=CN188355; organism=Citrus sinensis; type=EST; length=796bp
GAGGCAATCCTGGAGCCATCCAAAGCCAGTTTCTTCCCGGCAATGACCAA
AATTGTTGGAACGCTTGGTCCTAAATCTCGATCTGTTGATGTTATATCCG
GTTGCCTCAAAGCTGGAATGTCTGTGGCTAGATTCGATTTCTCGTGGGGT
AATACTGAATACCACCAAGAGACCTTGGAGAATCTCAAGGCGGCAGTTAA
GACTACTAAGAAGCTTTGTGCTGTTATGTTGGACACAGTGGGTCCCGAAT
TGCAGGTTGTTAATAAGAGTGAGAAGGCAATTTCACTTAAGGCAGATGGT
TCTGTTGTTCTCACACCTGACTGTGGACAAGAAGCCACTTCTCAAGTTTT
GCCCATCAATTTCGATGGACTTGCTAAGTCAGTGAAGAAAGGAGACACCA
TTTTTATCGGTCAATACTTGTTCACTGGAAGTGAGACTACTTCTGTGTGG
CTGGAGGTTTCTGAAGTGAAAGGAAATGATGTAACTTGTGTGATAAAGAA
TACTGCAACATTGGCTGGTTCACTTTTCACTTTACATGCCTCTCAAATTC
GTATTCAACTGCCAACTCTTTCTGATAAAGATAAGGAGGTCATTAGTTCT
TGGGGAGTTCAAAACAAAATTGACTTCCTCTCATTGTCCTATACGCGACA
TGCAGAAGACGTGCGCCAAGCTCGCGAGTATCTCTCCAAGTTGGGTGACC
TCAGTCAAACTCAAATTTTTGCAAAGATTGAGAATATAGAGGGTTTGACC
CATTTTGATGAGATCCTTCAAGCAGCAGATGGTATTATTCTTTCCC
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