CX300691

Overview
NameCX300691
Unique NameCX300691
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length392
Libraries
Library NameType
PhyRootSw1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of CX300691 vs. ExPASy Swiss-Prot
Match: RAB2B_MOUSE (Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 1.041e-12
Identity = 36/66 (54.55%), Postives = 44/66 (66.67%), Query Frame = 2 
Query:    2 ELRDHADSNIVIMLVGNKSDLRHLRAVSTEEASQFAEKHGLSFIETSALESTNVEEAFQQILTEIY 199
            + R H+ SN+VIML+GNKSDL   R V  EE   FA +HGL F+ETSA  + NVEEA+     EIY
Sbjct:  103 DARQHSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIY 168
The following BLAST results are available for this feature:
BLAST of CX300691 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 61
Match NameE-valueIdentityDescription
RAB2B_MOUSE1.041e-1254.55Ras-related protein Rab-2B OS=Mus musculus GN=Rab2... [more]

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Properties
Property NameValue
Genbank descriptionC08001B11SK PhyRootSw1 Citrus sinensis cDNA clone C08001B11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CX300691 ID=CX300691; Name=CX300691; organism=Citrus sinensis; type=EST; length=392bp
TGAACTCCGAGATCACGCTGACAGCAATATTGTTATTATGCTTGTTGGTA
ATAAGAGCGATCTCAGACATTTACGAGCTGTTTCTACTGAGGAAGCTTCT
CAATTCGCTGAAAAGCACGGACTTTCATTTATTGAAACTTCTGCTCTCGA
ATCTACTAATGTAGAGGAAGCTTTCCAACAAATCTTAACTGAAATTTATA
ACATTGTTGGAACTGGTACTGGACGAACTGGTGGTGGTGCTGAACCAAAG
AAAGAGGAAATTGGTGGCGGAGGAGCAAAACTCGTTTTGGACGCAGGGGG
CCAAAATCCTGGTGGTGCAAATGAAGGAAAGAAGGGCGGATGCTGTGGAT
AAAACTATCCTCAGTATTTATTTTTAATTATTTGGCCATTTT
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