CN188340

Overview
NameCN188340
Unique NameCN188340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.312e-77
Identity = 150/230 (65.22%), Postives = 170/230 (73.91%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DKSQV+++VLVGGSTRIPKVQ+L+ DFFNGKE  KSINPDE           IL+G+ + K QD           GIETAGGVMT LIPRNTTIPTKK +IFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+VSA +K  G   +ITITNDKGRLS+EEIERMV                    N LE+YAY+++ T
Sbjct:  321 DAKLDKSQVNEIVLVGGSTRIPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSEKITITNDKGRLSQEEIERMVSEAEKYKEEDEKEAKRIAAKNGLESYAYSLKQT 550          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 288.5 bits (737), Expect = 2.312e-77
Identity = 147/229 (64.19%), Postives = 173/229 (75.55%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                   N+LE+YA+NM++
Sbjct:  323 DAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKS 551          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 288.5 bits (737), Expect = 2.312e-77
Identity = 147/229 (64.19%), Postives = 173/229 (75.55%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ETAGGVMT LI RN+TIPTK+ Q F+TYSDNQPGVLIQVYEGERA T+DNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                   N+LE+YA+NM++
Sbjct:  323 DAKMDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKS 551          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HS71L_PIG (Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 288.115 bits (736), Expect = 3.019e-77
Identity = 146/229 (63.76%), Postives = 174/229 (75.98%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK+++HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE           IL G+ +EKVQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA T+DNNLLG+F+LTGIPPAPRGVPQI V FDIDANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMV                    N+LE+YA+NM++
Sbjct:  325 DAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKS 553          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HS71L_BOVIN (Heat shock 70 kDa protein 1-like OS=Bos taurus GN=HSPA1L PE=3 SV=1)

HSP 1 Score: 287.73 bits (735), Expect = 3.943e-77
Identity = 146/229 (63.76%), Postives = 174/229 (75.98%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK+++HD+VLVGGSTRIPKVQ+LLQD+FNG++L KSINPDE           IL G+ +EKVQD           G+ETAGGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA T+DNNLLG+F+LTGIPPAPRGVPQI V FDIDANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMV                    N+LE+YA+NM++
Sbjct:  325 DAKMDKAKIHDIVLVGGSTRIPKVQRLLQDYFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSEKVQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTRDNNLLGRFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKS 553          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_CHICK (Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV=1)

HSP 1 Score: 286.574 bits (732), Expect = 8.784e-77
Identity = 147/230 (63.91%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+VSA DK+ G +N+ITITNDKGRLSK++I+RMVQ                   NSLE+Y YNM+ T
Sbjct:  326 DAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVTPLSLGIETAGGVMTALIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGRLSKDDIDRMVQEAEKYKAEDEANRDRVGAKNSLESYTYNMKQT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 285.419 bits (729), Expect = 1.957e-76
Identity = 148/230 (64.35%), Postives = 168/230 (73.04%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D K+DKSQV ++VLVGGSTRIPK+Q+L+ DFFNGKE  KSINPDE           IL+G+ + K QD           GIETAGGVMT LIPRNTTIPTKK +IFSTYSDNQPGVLIQVYEGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+VSA +K  G   +ITITNDKGRLSKEEI+RMV                    N LE+YAY+++ T
Sbjct:  323 DGKLDKSQVAEIVLVGGSTRIPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTGDTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSQKITITNDKGRLSKEEIDRMVAEAEKYKEEDEKEAARIAAKNGLESYAYSLKQT 552          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 284.648 bits (727), Expect = 3.338e-76
Identity = 147/231 (63.64%), Postives = 170/231 (73.59%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+KIDKSQVH++VLVGGSTRIP++Q+L+ D+FNGKE  KSINPDE           ILSG+ + K   +           GIETAGG+MT LIPRNTTIPTKK ++FST+SDNQPGVLIQVYEGER RTKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGI++VSA +K  G  NQITITNDKGRLSKEEIERM+                    N LE+YAY++RNT
Sbjct:  321 DAKIDKSQVHEIVLVGGSTRIPRIQKLISDYFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTSEILLLDVAPLSLGIETAGGMMTKLIPRNTTIPTKKSEVFSTFSDNQPGVLIQVYEGERQRTKDNNLLGKFELTGIPPAPRGVPQIEVTFDVDANGIMNVSALEKGTGKTNQITITNDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNT 551          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_SCHPO (Probable heat shock protein ssa2 OS=Schizosaccharomyces pombe GN=ssa2 PE=1 SV=3)

HSP 1 Score: 284.263 bits (726), Expect = 4.360e-76
Identity = 146/230 (63.48%), Postives = 170/230 (73.91%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            DSK+DK+ V+++VLVGGSTRIP+VQ+L+ DFFNGKE CKSINPDE           +L+G+ +EK QD           GIETAGGVMT LI RNTTIPTKK +IFSTYSDNQPGVLIQV+EGERARTKD NLLGKFEL+GIPPAPRGVPQI V FD+DANGIL+VSA +K  G   +ITITNDKGRLSKEEI+RMV                    N LE+YAY++RN+
Sbjct:  321 DSKVDKASVNEIVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLLLDVAPLSMGIETAGGVMTPLIKRNTTIPTKKSEIFSTYSDNQPGVLIQVFEGERARTKDCNLLGKFELSGIPPAPRGVPQIEVTFDVDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDRMVAEAEKYKAEDEAESGRIQAKNHLESYAYSLRNS 550          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP71_CANAL (Heat shock protein SSA1 OS=Candida albicans GN=SSA1 PE=1 SV=2)

HSP 1 Score: 284.263 bits (726), Expect = 4.360e-76
Identity = 145/230 (63.04%), Postives = 170/230 (73.91%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+KIDKSQV ++VLVGGSTRIPK+Q+L+ DFFNGKEL KSINPDE           IL+G+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+VSA +K  G   +ITITNDKGRLSKEEI++MV                    N LE+YAY+++NT
Sbjct:  322 DAKIDKSQVEEIVLVGGSTRIPKIQKLVSDFFNGKELNKSINPDEAVAYGAAVQAAILTGDTSSKTQDILLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIDKMVSEAEKFKEEDEKEAARVQAKNQLESYAYSLKNT 551          
The following BLAST results are available for this feature:
BLAST of CN188340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_PICAN2.312e-7765.22Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HS71B_MOUSE2.312e-7764.19Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE2.312e-7764.19Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HS71L_PIG3.019e-7763.76Heat shock 70 kDa protein 1-like OS=Sus scrofa GN=... [more]
HS71L_BOVIN3.943e-7763.76Heat shock 70 kDa protein 1-like OS=Bos taurus GN=... [more]
HSP70_CHICK8.784e-7763.91Heat shock 70 kDa protein OS=Gallus gallus PE=3 SV... [more]
HSP71_PICAN1.957e-7664.35Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HSP70_NEUCR3.338e-7663.64Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
HSP72_SCHPO4.360e-7663.48Probable heat shock protein ssa2 OS=Schizosaccharo... [more]
HSP71_CANAL4.360e-7663.04Heat shock protein SSA1 OS=Candida albicans GN=SSA... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188340 ID=CN188340; Name=CN188340; organism=Citrus sinensis; type=EST; length=698bp
GCGTGCGACTCAAAAATTGATAAGAGCCAGGTTCATGATGTTGTTCTTGT
TGGTGGGTCAACAAGAATTCCAAAAGTTCAACAATTGTTGCAAGACTTCT
TTAACGGGAAGGAACTGTGCAAGAGCATAAACCCTGATGAGGCTGTTGCT
TATGGAGCTGCTGTGCAGGCTGCTATTTTGAGCGGTGAAGGGAATGAGAA
GGTTCAAGATTTGCTGCTGCTTGATGTTACACCTCTCAGCCTCGGTATTG
AGACTGCTGGCGGTGTAATGACAACCTTGATTCCAAGGAACACGACAATT
CCTACAAAGAAAGAGCAAATTTTCTCAACTTATTCAGACAATCAGCCTGG
TGTGTTGATTCAGGTGTATGAAGGTGAAAGAGCTAGAACAAAAGATAACA
ATCTGCTTGGGAAATTCGAGCTCACGGGCATTCCTCCGGCACCAAGAGGT
GTTCCTCAGATCAATGTGTGCTTTGACATTGATGCTAATGGTATATTGCA
TGTCTCCGCAGAAGATAAGACTGCTGGAGTGAAGAACCAGATTACAATCA
CCAACGATAAGGGAAGATTGAGCAAGGAGGAAATTGAGAGAATGGTGCAA
GAGGCAGAGAAGTACAAGGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGA
GGCCAAGAACTCATTGGAGAATTATGCTTATAACATGAGGAACACTGT
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