CN188340

Overview
NameCN188340
Unique NameCN188340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_CAPHI (Heat shock-related 70 kDa protein 2 OS=Capra hircus GN=HSPA2 PE=3 SV=1)

HSP 1 Score: 281.182 bits (718), Expect = 3.691e-75
Identity = 143/230 (62.17%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+V+A DK+ G +N+ITITNDKGRLSK++I+RMVQ                   N++E+Y YN++ T
Sbjct:  326 DAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 281.182 bits (718), Expect = 3.691e-75
Identity = 143/230 (62.17%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DK Q+ ++VLVGGSTRIPK+Q+LLQDFFNGKEL KSINPDE           IL G+ +E VQD           GIETAGGVMT LI RNTTIPTK+ Q F+TYSDNQ  VL+QVYEGERA TKDNNLLGKF+LTGIPPAPRGVPQI V FDIDANGIL+V+A DK+ G +N+ITITNDKGRLSK++I+RMVQ                   N++E+Y YN++ T
Sbjct:  326 DAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIGDKSENVQDLLLLDVTPLSLGIETAGGVMTPLIKRNTTIPTKQTQTFTTYSDNQSSVLVQVYEGERAMTKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 280.796 bits (717), Expect = 4.820e-75
Identity = 143/230 (62.17%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DK+Q+HDVVLVGGSTRIP+VQ+LLQDFFNGKEL KSINPDE           +L G+  EKV+D           G+ETAGGVMTTLI RN TIPTK+ Q F+TYSDNQPGV IQVYEGERA TKDNNLLG+FEL+GIPPAPRGVPQI V FDIDANGIL V+A D++ G  N+ITITNDKGRLSKEE+ERMV+                   NSLE + ++++ +
Sbjct:  325 DAKLDKAQIHDVVLVGGSTRIPRVQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAVLMGDKCEKVRDLLLLDVAPLSLGLETAGGVMTTLIQRNATIPTKQTQTFTTYSDNQPGVFIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILSVTATDRSTGKANKITITNDKGRLSKEEVERMVREAEQYKAEDEAQRDRVAAKNSLETHVFHVKGS 554          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP71_CERAE (Heat shock 70 kDa protein 1 OS=Cercopithecus aethiops GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 280.411 bits (716), Expect = 6.295e-75
Identity = 146/229 (63.76%), Postives = 171/229 (74.67%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK+Q+HD+VLVGGSTRIPKVQ+LLQDFFNG++L KSINPDE           IL G+ +E VQD           G+ET GGVMT LI RN+TIPTK+ QIF+TYSDNQPGVLIQVYEGERA TKDNNLLG+FEL+GIPPAP GVPQI V F+IDANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                   N+LE+YA NM++
Sbjct:  321 DAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETPGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAP-GVPQIEVTFEIDANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRERVSAKNALESYALNMKS 548          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 279.641 bits (714), Expect = 1.074e-74
Identity = 144/230 (62.61%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+KIDKS+V ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           ILSG+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+VSA +K  G   +ITITNDKGRLSKEEIE+MV                    N LE+YAY+++NT
Sbjct:  321 DAKIDKSKVDEIVLVGGSTRIPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSGDTSSKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSALEKGTGKTQKITITNDKGRLSKEEIEKMVSEAEKFKEEDEKEASRVQAKNQLESYAYSLKNT 550          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 279.256 bits (713), Expect = 1.402e-74
Identity = 141/230 (61.30%), Postives = 169/230 (73.48%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            DSK+DKSQ+ ++VLVGGSTRIPK+Q+L+ DFFNGKE  +SINPDE           IL+G+ + K QD           GIETAGG+MT LIPRN+TIPTKK + FSTY+DNQPGVLIQV+EGER RTKDNNLLGKFEL+GIPPAPRGVPQI+V FDIDANGIL+VSA +K  G  N+ITITNDKGRLSK++I+RMV                    N LE+YA+ ++NT
Sbjct:  321 DSKLDKSQIDEIVLVGGSTRIPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSTKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDVTFDIDANGILNVSALEKGTGKSNKITITNDKGRLSKDDIDRMVSEAEKYRADDEREAERVQAKNQLESYAFTLKNT 550          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 1.832e-74
Identity = 145/230 (63.04%), Postives = 167/230 (72.61%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+ K++VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           IL+G+ +EKVQD           GIETAGGVMT LI RNTTIP KK + FSTY+DNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAP  VPQI V FD+ A+GIL+VSA DK+    N+ITITNDKGRLSKEEIERMV                    N LE+YAYN+RNT
Sbjct:  326 DAKMAKNEVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILAGDQSEKVQDLLLLDVAPLSLGIETAGGVMTPLIKRNTTIPAKKSETFSTYADNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPPRVPQIEVSFDVGADGILNVSAVDKSTNRSNKITITNDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP71_YEAST (Heat shock protein SSA1 OS=Saccharomyces cerevisiae GN=SSA1 PE=1 SV=4)

HSP 1 Score: 278.485 bits (711), Expect = 2.392e-74
Identity = 142/230 (61.74%), Postives = 170/230 (73.91%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DKSQV ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD           GIETAGGVMT LIPRN+TIPTKK +IFSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FD+D+NGIL+VSA +K  G  N+ITITNDKGRLSKE+IE+MV                    N LE+ AY+++NT
Sbjct:  320 DAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEIFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNT 549          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP72_YEAST (Heat shock protein SSA2 OS=Saccharomyces cerevisiae GN=SSA2 PE=1 SV=3)

HSP 1 Score: 278.1 bits (710), Expect = 3.124e-74
Identity = 141/230 (61.30%), Postives = 170/230 (73.91%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DKSQV ++VLVGGSTRIPKVQ+L+ D+FNGKE  +SINPDE           IL+G+ + K QD           GIETAGGVMT LIPRN+TIPTKK ++FSTY+DNQPGVLIQV+EGERA+TKDNNLLGKFEL+GIPPAPRGVPQI V FD+D+NGIL+VSA +K  G  N+ITITNDKGRLSKE+IE+MV                    N LE+ AY+++NT
Sbjct:  320 DAKLDKSQVDEIVLVGGSTRIPKVQKLVTDYFNGKEPNRSINPDEAVAYGAAVQAAILTGDESSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDVDSNGILNVSAVEKGTGKSNKITITNDKGRLSKEDIEKMVAEAEKFKEEDEKESQRIASKNQLESIAYSLKNT 549          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP74_YEAST (Heat shock protein SSA4 OS=Saccharomyces cerevisiae GN=SSA4 PE=1 SV=3)

HSP 1 Score: 277.33 bits (708), Expect = 5.329e-74
Identity = 140/230 (60.87%), Postives = 168/230 (73.04%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            DSK+DKSQ+ ++VLVGGSTRIPKVQ+L+ DFFNGKE  +SINPDE           IL+G+ +   QD           GIETAGG+MT LIPRN+TIPTKK ++FSTY+DNQPGVLIQV+EGER RTKDNNLLGKFEL+GIPPAPRGVPQI V FDIDANGIL+VSA +K  G  N+ITITNDKGRLSKE+I++MV                    N LE+YA+ ++N+
Sbjct:  321 DSKLDKSQIDEIVLVGGSTRIPKVQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTGDQSSTTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSEVFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKSNKITITNDKGRLSKEDIDKMVAEAEKFKAEDEQEAQRVQAKNQLESYAFTLKNS 550          
The following BLAST results are available for this feature:
BLAST of CN188340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_CAPHI3.691e-7562.17Heat shock-related 70 kDa protein 2 OS=Capra hircu... [more]
HSP72_BOVIN3.691e-7562.17Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP76_SAGOE4.820e-7562.17Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP71_CERAE6.295e-7563.76Heat shock 70 kDa protein 1 OS=Cercopithecus aethi... [more]
HSP72_CANAL1.074e-7462.61Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP73_YEAST1.402e-7461.30Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP70_BLAEM1.832e-7463.04Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP71_YEAST2.392e-7461.74Heat shock protein SSA1 OS=Saccharomyces cerevisia... [more]
HSP72_YEAST3.124e-7461.30Heat shock protein SSA2 OS=Saccharomyces cerevisia... [more]
HSP74_YEAST5.329e-7460.87Heat shock protein SSA4 OS=Saccharomyces cerevisia... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188340 ID=CN188340; Name=CN188340; organism=Citrus sinensis; type=EST; length=698bp
GCGTGCGACTCAAAAATTGATAAGAGCCAGGTTCATGATGTTGTTCTTGT
TGGTGGGTCAACAAGAATTCCAAAAGTTCAACAATTGTTGCAAGACTTCT
TTAACGGGAAGGAACTGTGCAAGAGCATAAACCCTGATGAGGCTGTTGCT
TATGGAGCTGCTGTGCAGGCTGCTATTTTGAGCGGTGAAGGGAATGAGAA
GGTTCAAGATTTGCTGCTGCTTGATGTTACACCTCTCAGCCTCGGTATTG
AGACTGCTGGCGGTGTAATGACAACCTTGATTCCAAGGAACACGACAATT
CCTACAAAGAAAGAGCAAATTTTCTCAACTTATTCAGACAATCAGCCTGG
TGTGTTGATTCAGGTGTATGAAGGTGAAAGAGCTAGAACAAAAGATAACA
ATCTGCTTGGGAAATTCGAGCTCACGGGCATTCCTCCGGCACCAAGAGGT
GTTCCTCAGATCAATGTGTGCTTTGACATTGATGCTAATGGTATATTGCA
TGTCTCCGCAGAAGATAAGACTGCTGGAGTGAAGAACCAGATTACAATCA
CCAACGATAAGGGAAGATTGAGCAAGGAGGAAATTGAGAGAATGGTGCAA
GAGGCAGAGAAGTACAAGGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGA
GGCCAAGAACTCATTGGAGAATTATGCTTATAACATGAGGAACACTGT
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