CN188340

Overview
NameCN188340
Unique NameCN188340
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length698
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_CLAHE (Heat shock 70 kDa protein OS=Cladosporium herbarum GN=HSP70 PE=1 SV=1)

HSP 1 Score: 270.011 bits (689), Expect = 8.508e-72
Identity = 142/231 (61.47%), Postives = 165/231 (71.43%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D KIDKS VH++VL GGSTRIPKVQ+L+ DFFNGKE CKSINPDE           ILSG+ + K  ++           GIETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGERARTKD NL+GKFEL+GI PAPRGVPQI V FD+DANGI++VSA +K  G  N+I ITNDKGRLSKEEIERM+                    N LE+YAY+++NT
Sbjct:  321 DDKIDKSSVHEIVLGGGSTRIPKVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILSGDTSSKSTKEILLLDVAPLSLGIETAGGVMTALIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDINLMGKFELSGIRPAPRGVPQIEVTFDLDANGIMNVSALEKGTGKTNKIVITNDKGRLSKEEIERMLADAEKYKEEDEAEAGRIQAKNGLESYAYSLKNT 551          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP74_TRYBB (Heat shock 70 kDa protein 4 OS=Trypanosoma brucei brucei PE=2 SV=2)

HSP 1 Score: 269.24 bits (687), Expect = 1.451e-71
Identity = 145/230 (63.04%), Postives = 164/230 (71.30%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+DK  VHDVVLVGGSTRIPKV QL+ DFF GKEL KSINPDE  X        IL+G  +++ +            GIETAGGVMT LI RNTTIPTKK QIFSTYSDNQPGV IQV+EGER  TKD +LLG F+L+GIPPAPRGVPQI V FD+DANGIL VSAE+K  G +NQI ITNDKGRLSK +IERMV              XX    N LENYA++M+NT
Sbjct:  326 DAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFGGKELNKSINPDEAVXYGAAVQAFILTGGKSKQTEGLLLLDVAPLTLGIETAGGVMTALIKRNTTIPTKKSQIFSTYSDNQPGVHIQVFEGERTMTKDCHLLGTFDLSGIPPAPRGVPQIEVTFDLDANGILSVSAEEKGTGKRNQIVITNDKGRLSKADIERMVSDAAKYEAEDKAHVXXIDAKNGLENYAFSMKNT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 3.233e-71
Identity = 139/231 (60.17%), Postives = 165/231 (71.43%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSG-EGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+K+ KSQVH+VVLVGGSTRIPKVQQLL DFFNGKE  KSINPDE           ILSG + ++K+QD           G+ETAGGVMTTLI RNTT+PTKK Q FSTY+DNQPGVLIQ++EGER+ T+DNNLLGKF L GIPP PRGVPQI+V FDIDANGI +VSA +K+ G +N+ITITND+    + +I+RMV                    N LENY+YN+RNT
Sbjct:  325 DAKLSKSQVHEVVLVGGSTRIPKVQQLLSDFFNGKEPNKSINPDEPVAYGATVQAAILSGNDSSQKLQDLLLLDVTPLSLGLETAGGVMTTLIARNTTVPTKKSQTFSTYADNQPGVLIQLFEGERSMTRDNNLLGKFNLDGIPPMPRGVPQIDVTFDIDANGIFNVSAVEKSTGKENKITITNDRVVCRRHDIDRMVSEAEKYKSEDEANKIRIEAKNGLENYSYNLRNT 555          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP71_PARBA (Heat shock 70 kDa protein 1 OS=Paracoccidioides brasiliensis (strain ATCC MYA-826 / Pb01) GN=HSP70-1 PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 4.223e-71
Identity = 142/231 (61.47%), Postives = 165/231 (71.43%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+KIDKS VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+   K   +           GIETAGGVMT LI RNTTIPTKK + FST++DNQPGVLIQV+EGERARTK+NNLLGKFELTGIPPAP GVPQI V FD+DANGI++VSA +K  G  N+I ITNDKGRLSKEEIERM+                    N LE+YAY++RNT
Sbjct:  320 DAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDSTSKSTNEILLLDVAPLSVGIETAGGVMTPLIKRNTTIPTKKSETFSTFADNQPGVLIQVFEGERARTKENNLLGKFELTGIPPAP-GVPQIEVTFDVDANGIMNVSALEKGIGKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRISAKNGLESYAYSLRNT 549          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_THEPA (Heat shock 70 kDa protein OS=Theileria parva GN=TP02_0148 PE=2 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.223e-71
Identity = 137/229 (59.83%), Postives = 161/229 (70.31%), Query Frame = 1
Query:   10 SKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            S +DK  +H+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG  +EK+Q+           G+ETAGGVMT LI RNTTIPTKK QIF+T  D Q GVLIQV+EGERA TKDNNLLGKF LTGI PAPRGVPQI V FDIDANGIL+V+A DK+ G    +TITNDKGRLS+EEI+RMV+                   + LENY Y+M+NT
Sbjct:  325 SGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQELLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRKCVESKHKLENYCYSMKNT 553          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_THEAN (Heat shock 70 kDa protein OS=Theileria annulata GN=TA11610 PE=3 SV=2)

HSP 1 Score: 267.7 bits (683), Expect = 4.223e-71
Identity = 137/229 (59.83%), Postives = 161/229 (70.31%), Query Frame = 1
Query:   10 SKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            S +DK  +H+VVLVGGSTRIPK+Q L+++FFNGKE C+SINPDE           ILSG  +EK+Q+           G+ETAGGVMT LI RNTTIPTKK QIF+T  D Q GVLIQV+EGERA TKDNNLLGKF LTGI PAPRGVPQI V FDIDANGIL+V+A DK+ G    +TITNDKGRLS+EEI+RMV+                   + LENY Y+M+NT
Sbjct:  325 SGLDKRSIHEVVLVGGSTRIPKIQTLIKNFFNGKEPCRSINPDEAVAYGAAVQAAILSGNQSEKIQELLLLDVAPLSLGLETAGGVMTVLIKRNTTIPTKKNQIFTTNEDRQEGVLIQVFEGERAMTKDNNLLGKFHLTGIAPAPRGVPQIEVTFDIDANGILNVTAMDKSTGKSEHVTITNDKGRLSQEEIDRMVEEAEKYKEEDEKRRRCVESRHKLENYCYSMKNT 553          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_TRYCR (Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 265.388 bits (677), Expect = 2.096e-70
Identity = 139/229 (60.70%), Postives = 162/229 (70.74%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+DK  VHDVVLVGGSTRIPKV QL+ DFF GKEL KSI PDE           IL+G  +++ +            GIETAGGVMT+LI RNTTIPTKK QIFSTY+DNQPGV IQV+EGERA TKD +LLG FEL+GIPP PRGVPQI V FD+DANGIL+VSAE+K  G +NQI +TNDKGRLS+ EIERMV+                   N LENYA++M+N
Sbjct:  326 DAKMDKRAVHDVVLVGGSTRIPKVMQLVSDFFRGKELKKSIQPDEAVAYGAAVQAFILTGGKSKQTEGLLLLDVTPLTLGIETAGGVMTSLIKRNTTIPTKKSQIFSTYADNQPGVHIQVFEGERAMTKDCHLLGTFELSGIPPPPRGVPQIEVTFDLDANGILNVSAEEKGTGKRNQIVLTNDKGRLSRAEIERMVREAAKYEAEDKDQVRQIDAKNGLENYAFSMKN 554          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 3.026e-69
Identity = 141/231 (61.04%), Postives = 164/231 (71.00%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEK-VQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRNT 696
            D+KIDKS VH++VLVGGSTRIP++Q+L+ DFFNGKE  KSINPDE           ILSG+ + K   +           GIETAGGVMT LI RNTTIPTKK + FST+SDNQPGVLIQV+EGERARTKDNNLLGKFELTGIP A RGVPQI V FD+DANGI++VSA +K     N+I ITNDKGRLSKEEIERM+                    N LE+YAY++RN+
Sbjct:  322 DAKIDKSSVHEIVLVGGSTRIPRIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSLGIETAGGVMTPLIKRNTTIPTKKSETFSTFSDNQPGVLIQVFEGERARTKDNNLLGKFELTGIPRA-RGVPQIEVTFDVDANGIMNVSALEKGTRKTNKIVITNDKGRLSKEEIERMLAEAEKYKAEDEAEASRIRPKNGLESYAYSLRNS 551          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: GRP78_NEUCR (78 kDa glucose-regulated protein homolog OS=Neurospora crassa GN=grp78 PE=3 SV=3)

HSP 1 Score: 261.151 bits (666), Expect = 3.952e-69
Identity = 136/229 (59.39%), Postives = 159/229 (69.43%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+ KS++ D+VLVGGSTRIPKVQ L+++FFNGK+  K INPDE           +LSGE  E  +D           GIET GGVMT LIPRNT IPT+K QIFST +DNQP VLIQVYEGER+ TKDNNLLGKFELTGIPPAPRGVPQI V F++DANGIL VSA DK  G    ITITNDKGRL++EEI+RMV                    N LENYA++++N
Sbjct:  357 DAKVSKSEIDDIVLVGGSTRIPKVQALIEEFFNGKKASKGINPDEAVAFGAAVQAGVLSGE--EGTEDIVLMDVNPLTLGIETTGGVMTKLIPRNTPIPTRKSQIFSTAADNQPVVLIQVYEGERSMTKDNNLLGKFELTGIPPAPRGVPQIEVSFELDANGILKVSAHDKGTGKAESITITNDKGRLTQEEIDRMVAEAEKYAEEDKATRERIEARNGLENYAFSLKN 583          
BLAST of CN188340 vs. ExPASy Swiss-Prot
Match: GRP78_ASPNG (78 kDa glucose-regulated protein homolog OS=Aspergillus niger GN=bipA PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.150e-68
Identity = 138/229 (60.26%), Postives = 157/229 (68.56%), Query Frame = 1
Query:    7 DSKIDKSQVHDVVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEXXXXXXXXXXXILSGEGNEKVQDXXXXXXXXXXXGIETAGGVMTTLIPRNTTIPTKKEQIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQINVCFDIDANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXXNSLENYAYNMRN 693
            D+K+ KS+V D+VLVGGSTRIPKVQ LL++FF GK+  K INPDE           +LSGE  E   D           GIET GGVMT LIPRNT IPT+K QIFST +DNQP VLIQVYEGER+ TKDNNLLGKFELTGIPPAPRGVPQI V FD+DANGIL V A DK  G    ITITNDKGRLS+EEI+RMV                    N+LENYA++++N
Sbjct:  367 DAKVKKSEVDDIVLVGGSTRIPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGE--EGTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEVSFDLDANGILKVHASDKGTGKAESITITNDKGRLSQEEIDRMVAEAEEFAEEDKAIKAKIEARNTLENYAFSLKN 593          
The following BLAST results are available for this feature:
BLAST of CN188340 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP70_CLAHE8.508e-7261.47Heat shock 70 kDa protein OS=Cladosporium herbarum... [more]
HSP74_TRYBB1.451e-7163.04Heat shock 70 kDa protein 4 OS=Trypanosoma brucei ... [more]
HSP70_BRELC3.233e-7160.17Heat shock 70 kDa protein OS=Bremia lactucae GN=HS... [more]
HSP71_PARBA4.223e-7161.47Heat shock 70 kDa protein 1 OS=Paracoccidioides br... [more]
HSP70_THEPA4.223e-7159.83Heat shock 70 kDa protein OS=Theileria parva GN=TP... [more]
HSP70_THEAN4.223e-7159.83Heat shock 70 kDa protein OS=Theileria annulata GN... [more]
HSP70_TRYCR2.096e-7060.70Heat shock 70 kDa protein OS=Trypanosoma cruzi GN=... [more]
HSP70_AJECA3.026e-6961.04Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
GRP78_NEUCR3.952e-6959.3978 kDa glucose-regulated protein homolog OS=Neuros... [more]
GRP78_ASPNG1.150e-6860.2678 kDa glucose-regulated protein homolog OS=Asperg... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188340 ID=CN188340; Name=CN188340; organism=Citrus sinensis; type=EST; length=698bp
GCGTGCGACTCAAAAATTGATAAGAGCCAGGTTCATGATGTTGTTCTTGT
TGGTGGGTCAACAAGAATTCCAAAAGTTCAACAATTGTTGCAAGACTTCT
TTAACGGGAAGGAACTGTGCAAGAGCATAAACCCTGATGAGGCTGTTGCT
TATGGAGCTGCTGTGCAGGCTGCTATTTTGAGCGGTGAAGGGAATGAGAA
GGTTCAAGATTTGCTGCTGCTTGATGTTACACCTCTCAGCCTCGGTATTG
AGACTGCTGGCGGTGTAATGACAACCTTGATTCCAAGGAACACGACAATT
CCTACAAAGAAAGAGCAAATTTTCTCAACTTATTCAGACAATCAGCCTGG
TGTGTTGATTCAGGTGTATGAAGGTGAAAGAGCTAGAACAAAAGATAACA
ATCTGCTTGGGAAATTCGAGCTCACGGGCATTCCTCCGGCACCAAGAGGT
GTTCCTCAGATCAATGTGTGCTTTGACATTGATGCTAATGGTATATTGCA
TGTCTCCGCAGAAGATAAGACTGCTGGAGTGAAGAACCAGATTACAATCA
CCAACGATAAGGGAAGATTGAGCAAGGAGGAAATTGAGAGAATGGTGCAA
GAGGCAGAGAAGTACAAGGCAGAGGATGAAGAGGTAAAGAAGAAAGTAGA
GGCCAAGAACTCATTGGAGAATTATGCTTATAACATGAGGAACACTGT
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