CN188339

Overview
NameCN188339
Unique NameCN188339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_CHLRE (Heat shock 70 kDa protein OS=Chlamydomonas reinhardtii GN=HSP70 PE=2 SV=2)

HSP 1 Score: 139.428 bits (350), Expect = 1.945e-32
Identity = 84/171 (49.12%), Postives = 102/171 (59.65%), Query Frame = -1
Query:  236 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQGGA-SGDVPMXXXXXXXXXXXXXXXXXXXXXGPKIEEVD 745
            DANGIL+VSAEDKT G KN+ITITNDKGRLSK+EIERMVQ                  KNSLENYAYNMRNT+R++K A +L  +DK+ +EKA+  A++WL+ NQ                LCNPII ++YQGGA +G +P                      GPKIEEVD
Sbjct:  487 DANGILNVSAEDKTTGNKNKITITNDKGRLSKDEIERMVQ-EAEKYKADDEQLKKVEAKNSLENYAYNMRNTIREDKVASQLSASDKESMEKALTAAMDWLEANQMAEVEEFEHHLKELEGLCNPIITRLYQGGAGAGGMP------GGGAGAGAAPSGGSGAGPKIEEVD 650          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_LUPPO (Heat shock 70 kDa protein (Fragment) OS=Lupinus polyphyllus PE=2 SV=2)

HSP 1 Score: 132.109 bits (331), Expect = 3.105e-30
Identity = 73/133 (54.89%), Postives = 83/133 (62.41%), Query Frame = -1
Query:  347 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQG 745
            DAN  L+VSAEDKT G KN+ITITNDKGRLSKE+IE+MVQ                  KN+LENYAY+MRNT+ D+K   KL   DK+KIE  +D AI  LDGNQ                LCNPIIAKMYQG
Sbjct:   95 DANWCLNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEVEKYKAEDEEVKKKVDTKNALENYAYSMRNTITDDKITSKLPTEDKKKIEDTVDGAISRLDGNQLPEVEEFEDKMKELESLCNPIIAKMYQG 227          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_BRUMA (Heat shock 70 kDa protein OS=Brugia malayi GN=HSP70 PE=3 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 3.105e-30
Identity = 69/142 (48.59%), Postives = 88/142 (61.97%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 745
            DANGIL+VSA+DK+ G +N+ITITNDKGRLSK+EIERMVQ                  KN+LE+YA+NM+ T+ DEK   K+   DK+KI++  DE + WLDGNQ                +CNPII K+YQ  GG  G +P
Sbjct:  480 DANGILNVSAQDKSTGKQNKITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMP 621          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_LEIDO (Heat shock 70 kDa protein OS=Leishmania donovani GN=HSP70 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.296e-30
Identity = 78/172 (45.35%), Postives = 93/172 (54.07%), Query Frame = -1
Query:  236 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVPMXXXXXXXXXXXXXXXXXXXXXGPKIEEVD 745
            DANGIL+VSAE+K  G +NQITITNDKGRLSK+EIERMV                   KN LENYAY+M+NT+ D   +GKLD +DK  + K ID  +EWL  NQ                +CNPI+ KMYQ  GGA G +P                      GPK+EEVD
Sbjct:  483 DANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDRAQRDRVEAKNGLENYAYSMKNTLGDSNVSGKLDDSDKATLNKEIDVTLEWLSSNQEATKEEYEHKQKELESVCNPIMTKMYQSMGGAGGGMP-GGMPDMSGMSGGAGPAGGASSGPKVEEVD 653          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_BLAEM (Heat shock 70 kDa protein OS=Blastocladiella emersonii GN=HSP70 PE=3 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.541e-29
Identity = 71/141 (50.35%), Postives = 86/141 (60.99%), Query Frame = -1
Query:  326 ANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 742
            A+GIL+VSA DK+    N+ITITNDKGRLSKEEIERMV                   KN LE+YAYN+RNT+ D+K AGK+D ADK+ + KAIDE I WLDGNQ                + NPI+ K+Y   GGA G +P
Sbjct:  485 ADGILNVSAVDKSTNRSNKITITNDKGRLSKEEIERMVAEAEKYKKEDEEAASRIQAKNGLESYAYNLRNTLNDDKVAGKMDAADKETLNKAIDETISWLDGNQEGAKDEYEHKQKELEGVANPIMTKLYSAAGGAPGGMP 625          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_LEIAM (Heat shock 70 kDa protein OS=Leishmania amazonensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.629e-29
Identity = 78/173 (45.09%), Postives = 92/173 (53.18%), Query Frame = -1
Query:  236 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ---GGASGDVPMXXXXXXXXXXXXXXXXXXXXXGPKIEEVD 745
            DANGIL+VSAE+K  G +NQITITNDKGRLSK+EIERMV                   KN LENYAY+M+NT+ D   +GKLD  DK  + K I+ A+EWL  NQ                +CNPI+ KMYQ   GGA G   M                     GPK+EEVD
Sbjct:  484 DANGILNVSAEEKGTGKRNQITITNDKGRLSKDEIERMVNDAMKYEADDKAQADRVEAKNGLENYAYSMKNTLGDSNVSGKLDDTDKSTLNKEIEAALEWLSSNQEATKEEYEHKQKELENVCNPIMTKMYQSMGGGAGGMAGM----PDMSSMSGARPAGGASSGPKVEEVD 652          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_LEIBR (Heat shock 70 kDa protein (Fragment) OS=Leishmania braziliensis GN=HSP70 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.433e-29
Identity = 76/172 (44.19%), Postives = 93/172 (54.07%), Query Frame = -1
Query:  236 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVPMXXXXXXXXXXXXXXXXXXXXXGPKIEEVD 745
            DANGIL+VSAE+K  G +N ITITNDKGRLSK+EIERMV                   KN LENYAY+M+NTV D   +GKL+ +D+  +  AID A+EWL+ NQ                 CNPI+ KMYQ  GG +G +P                      GPK+EEVD
Sbjct:   58 DANGILNVSAEEKGTGKRNHITITNDKGRLSKDEIERMVNDASKYEQADKMQRDALEAKNGLENYAYSMKNTVSDTNVSGKLEESDRSALNLAIDTALEWLNSNQEASKEEYEHRQKELESTCNPIMTKMYQSMGGGAGGMP-GGMPDMSGMGGGQGPAAGASSGPKVEEVD 228          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP7C_SAGOE (Heat shock cognate 71 kDa protein OS=Saguinus oedipus GN=HSPA8 PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 72/142 (50.70%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 745
            DANGIL+VSA DK+ G +N+ITITNDKGRLSKE+IERMVQ                  KNSLE+YA+NM+ TV DEK  GK++  DKQKI    +E I WLD NQ                +CNPII K+YQ  GG  G +P
Sbjct:  481 DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMP 622          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP7C_RAT (Heat shock cognate 71 kDa protein OS=Rattus norvegicus GN=Hspa8 PE=1 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 72/142 (50.70%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 745
            DANGIL+VSA DK+ G +N+ITITNDKGRLSKE+IERMVQ                  KNSLE+YA+NM+ TV DEK  GK++  DKQKI    +E I WLD NQ                +CNPII K+YQ  GG  G +P
Sbjct:  481 DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMP 622          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP7C_PONAB (Heat shock cognate 71 kDa protein OS=Pongo abelii GN=HSPA8 PE=2 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.484e-29
Identity = 72/142 (50.70%), Postives = 86/142 (60.56%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 745
            DANGIL+VSA DK+ G +N+ITITNDKGRLSKE+IERMVQ                  KNSLE+YA+NM+ TV DEK  GK++  DKQKI    +E I WLD NQ                +CNPII K+YQ  GG  G +P
Sbjct:  481 DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMP 622          
The following BLAST results are available for this feature:
BLAST of CN188339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HSP70_CHLRE1.945e-3249.12Heat shock 70 kDa protein OS=Chlamydomonas reinhar... [more]
HSP70_LUPPO3.105e-3054.89Heat shock 70 kDa protein (Fragment) OS=Lupinus po... [more]
HSP70_BRUMA3.105e-3048.59Heat shock 70 kDa protein OS=Brugia malayi GN=HSP7... [more]
HSP70_LEIDO5.296e-3045.35Heat shock 70 kDa protein OS=Leishmania donovani G... [more]
HSP70_BLAEM1.541e-2950.35Heat shock 70 kDa protein OS=Blastocladiella emers... [more]
HSP70_LEIAM2.629e-2945.09Heat shock 70 kDa protein OS=Leishmania amazonensi... [more]
HSP70_LEIBR3.433e-2944.19Heat shock 70 kDa protein (Fragment) OS=Leishmania... [more]
HSP7C_SAGOE4.484e-2950.70Heat shock cognate 71 kDa protein OS=Saguinus oedi... [more]
HSP7C_RAT4.484e-2950.70Heat shock cognate 71 kDa protein OS=Rattus norveg... [more]
HSP7C_PONAB4.484e-2950.70Heat shock cognate 71 kDa protein OS=Pongo abelii ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188339 ID=CN188339; Name=CN188339; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTAGAGCTCAAATTTTTATTGTAATTTGATATTCA
AGTAAACTATAGGTACATAGCAGAGCATTCAGACAACTATAGATTACATC
ACTATAGTAACATGAGTAACCCCTCAAACCTAATGTATATCATACACAGG
TATTCGCCCTCGAGCATCAGCAAAAACGGAGCCACAACAGATGAGTCCCA
AAACAGAGCACTCTATGACTCTCATTCATGCCTTAGTCAACTTCCTCAAT
CTTAGGTCCGCCACCTGCACCGCCAGTCTCTGCCTTGCCATGGCCGCCTC
CCGGCATCTCGGCACCACCACCCATCGGTACGTCCCCACTAGCCCCGCCT
TGATACATCTTTGCAATAATTGGGTTGCACAAGCCTTCCAACTCCTTCAA
CTTGTCCTCCAATTCATCAACCTCAGCCAATTGGTTCCCATCAAGCCACT
CAATAGCCTCATCAATGGCCTTCTCTATCTTCTGCTTGTCAGCCGGGTCT
AGTTTTCCCGCAAACTTCTCATCTCTCACAGTGTTCCTCATGTTATAAGC
ATAATTCTCCAATGAGTTCTTGGCCTCTACTTTCTTCTTTACCTCTTCAT
CCTCTGCCTTGTACTTCTCTGCCTCTTGCACCATTCTCTCAATTTCCTCC
TTGCTCAATCTTCCCTTATCGTTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGTCTTATCTTCTGCGGAGACATGCAATATACCATTAGCATC
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