CN188339

Overview
NameCN188339
Unique NameCN188339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP72_BOVIN (Heat shock-related 70 kDa protein 2 OS=Bos taurus GN=HSPA2 PE=2 SV=2)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 64/137 (46.72%), Postives = 81/137 (59.12%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQGGASG 745
            DANGIL+V+A DK+ G +N+ITITNDKGRLSK++I+RMVQ                  KN++E+Y YN++ TV DEK  GK+   DK KI     E I WLD NQ                +CNPII+K+YQGG  G
Sbjct:  484 DANGILNVTAADKSTGKENKITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISDQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQGGPGG 620          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_ECHGR (Heat shock cognate 70 kDa protein OS=Echinococcus granulosus GN=HSP70 PE=2 SV=1)

HSP 1 Score: 122.865 bits (307), Expect = 1.884e-27
Identity = 67/145 (46.21%), Postives = 87/145 (60.00%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ-----GGASGDVP 745
            DANGIL+VSA DK+ G +N+ITIT DKGRLSKEEIERMV                   KN LE+YA++M++TV DEK   K+  +D+++I +  +E ++WLDGNQ                +CNPIIAKMYQ     GG  G +P
Sbjct:  483 DANGILNVSAVDKSTGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSMKSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEKEEYEHRQKELESVCNPIIAKMYQEAGGVGGIPGGIP 627          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP_SPIOL (Luminal-binding protein OS=Spinacia oleracea GN=HSC70 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 68/141 (48.23%), Postives = 85/141 (60.28%), Query Frame = -1
Query:  332 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGD 745
            DANGIL+V AEDK +G   +ITITNDKGRLS+EEIERMV+                  +NSLE Y YNM+N + D +K A KL+  +K+KIE A+ EA+EWLD NQ                +CNPII  +YQ  GG SG+
Sbjct:  513 DANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNSLETYIYNMKNQISDADKLADKLESDEKEKIEGAVKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGPSGE 653          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP8_TOBAC (Luminal-binding protein 8 (Fragment) OS=Nicotiana tabacum GN=BIP8 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 69/140 (49.29%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK +G   +ITITNDKGRLS+EEIERMV+                  +NSLE Y YNMRN + D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  140 DANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 279          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP5_TOBAC (Luminal-binding protein 5 OS=Nicotiana tabacum GN=BIP5 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 69/140 (49.29%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK +G   +ITITNDKGRLS+EEIERMV+                  +NSLE Y YNMRN + D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  513 DANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPG 652          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP4_TOBAC (Luminal-binding protein 4 OS=Nicotiana tabacum GN=BIP4 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.197e-27
Identity = 69/140 (49.29%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK +G   +ITITNDKGRLS+EEIERMV+                  +NSLE Y YNMRN + D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  514 DANGILNVKAEDKASGKSEKITITNDKGRLSQEEIERMVKEAEEFAEEDKKVKERIDARNSLETYVYNMRNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQKSGGAPG 653          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 66/137 (48.18%), Postives = 83/137 (60.58%), Query Frame = -1
Query:  341 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGA 745
            DANGIL+VSA DK+ G +N+ITITNDKGRLSK++IERMV                   KN LE+YA+N++ T+ DEK   K+ P DK+KIE   DE ++WLD NQ                L NPII+K+YQ  GGA
Sbjct:  482 DANGILNVSATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEFEHQQKDLEGLANPIISKLYQSAGGA 618          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP3_TOBAC (Luminal-binding protein 3 (Fragment) OS=Nicotiana tabacum GN=BIP3 PE=2 SV=1)

HSP 1 Score: 121.324 bits (303), Expect = 5.481e-27
Identity = 68/140 (48.57%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK  G   +ITITNDKGRLS+EEIERMV+                  +N LE Y YNM+N + D +K A KL+  +K+KIE A+ EA+EWLD NQ                +CNPII  +YQ  GGASG
Sbjct:   16 DANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQINDKDKLADKLESDEKEKIETAVKEALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITAVYQRSGGASG 155          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP7C_CHICK (Heat shock cognate 71 kDa protein OS=Gallus gallus GN=HSPA8 PE=1 SV=1)

HSP 1 Score: 120.939 bits (302), Expect = 7.158e-27
Identity = 69/142 (48.59%), Postives = 83/142 (58.45%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASGDVP 745
            DANGIL+VSA DK+ G +N+ITITNDKGRLSKE+IERMVQ                  KNSL++YA+NM+ TV DEK  GK+   D Q I    +E I WLD NQ                +CNPII K+YQ  GG  G +P
Sbjct:  481 DANGILNVSAVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLDSYAFNMKATVEDEKLPGKILDEDHQNILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMP 622          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS71L_MACFA (Heat shock 70 kDa protein 1-like OS=Macaca fascicularis GN=HSPA1L PE=2 SV=1)

HSP 1 Score: 120.553 bits (301), Expect = 9.349e-27
Identity = 64/137 (46.72%), Postives = 82/137 (59.85%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQGGASG 745
            DANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMV                   KN+LE+YA+NM++ V DE   GK+  +DK+KI    +E + WL+ NQ                +CNPII K+YQGG +G
Sbjct:  483 DANGILNVTAMDKSTGKANKITITNDKGRLSKEEIERMVLDAEKYKAEDEVQREKIAAKNALESYAFNMKSVVSDEGLKGKISESDKKKILDKCNELLSWLEANQLAEKDEFDHKRKELEQMCNPIITKLYQGGCTG 619          
The following BLAST results are available for this feature:
BLAST of CN188339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HSP72_BOVIN1.884e-2746.72Heat shock-related 70 kDa protein 2 OS=Bos taurus ... [more]
HSP70_ECHGR1.884e-2746.21Heat shock cognate 70 kDa protein OS=Echinococcus ... [more]
BIP_SPIOL4.197e-2748.23Luminal-binding protein OS=Spinacia oleracea GN=HS... [more]
BIP8_TOBAC4.197e-2749.29Luminal-binding protein 8 (Fragment) OS=Nicotiana ... [more]
BIP5_TOBAC4.197e-2749.29Luminal-binding protein 5 OS=Nicotiana tabacum GN=... [more]
BIP4_TOBAC4.197e-2749.29Luminal-binding protein 4 OS=Nicotiana tabacum GN=... [more]
HSP7A_CAEEL5.481e-2748.18Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
BIP3_TOBAC5.481e-2748.57Luminal-binding protein 3 (Fragment) OS=Nicotiana ... [more]
HSP7C_CHICK7.158e-2748.59Heat shock cognate 71 kDa protein OS=Gallus gallus... [more]
HS71L_MACFA9.349e-2746.72Heat shock 70 kDa protein 1-like OS=Macaca fascicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188339 ID=CN188339; Name=CN188339; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTAGAGCTCAAATTTTTATTGTAATTTGATATTCA
AGTAAACTATAGGTACATAGCAGAGCATTCAGACAACTATAGATTACATC
ACTATAGTAACATGAGTAACCCCTCAAACCTAATGTATATCATACACAGG
TATTCGCCCTCGAGCATCAGCAAAAACGGAGCCACAACAGATGAGTCCCA
AAACAGAGCACTCTATGACTCTCATTCATGCCTTAGTCAACTTCCTCAAT
CTTAGGTCCGCCACCTGCACCGCCAGTCTCTGCCTTGCCATGGCCGCCTC
CCGGCATCTCGGCACCACCACCCATCGGTACGTCCCCACTAGCCCCGCCT
TGATACATCTTTGCAATAATTGGGTTGCACAAGCCTTCCAACTCCTTCAA
CTTGTCCTCCAATTCATCAACCTCAGCCAATTGGTTCCCATCAAGCCACT
CAATAGCCTCATCAATGGCCTTCTCTATCTTCTGCTTGTCAGCCGGGTCT
AGTTTTCCCGCAAACTTCTCATCTCTCACAGTGTTCCTCATGTTATAAGC
ATAATTCTCCAATGAGTTCTTGGCCTCTACTTTCTTCTTTACCTCTTCAT
CCTCTGCCTTGTACTTCTCTGCCTCTTGCACCATTCTCTCAATTTCCTCC
TTGCTCAATCTTCCCTTATCGTTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGTCTTATCTTCTGCGGAGACATGCAATATACCATTAGCATC
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