CN188339

Overview
NameCN188339
Unique NameCN188339
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length745
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26
Identity = 66/140 (47.14%), Postives = 81/140 (57.86%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQGGASGDVP 745
            DANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                  KN+LE+YA+NM++ V DE   GK+  ADK+K+     E I WLD N                 +CNPII+ +YQ GA G  P
Sbjct:  481 DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVGAKNALESYAFNMKSVVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIISGLYQ-GAGGPGP 619          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP_SOLLC (Luminal-binding protein OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 117.857 bits (294), Expect = 6.060e-26
Identity = 67/140 (47.86%), Postives = 82/140 (58.57%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK  G   +ITITNDKGRLS+EEIERMV+                  +N+LE Y YNM+N + D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  513 DANGILNVKAEDKGTGKAEKITITNDKGRLSQEEIERMVREAEEFAEEDKKVKEKIDARNALETYVYNMKNQINDKDKLADKLESDEKEKIETATKEALEWLDDNQSAEKEDYDEKLKEVEAVCNPIITAVYQRSGGAPG 652          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP71_CANFA (Heat shock 70 kDa protein 1 OS=Canis familiaris GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 66/141 (46.81%), Postives = 80/141 (56.74%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQG----GASG 745
            DANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                  KN+LE+YA+NM++ V DE   GK+  ADK+K+     E I WLD N                 +CNPII  +YQG    GA G
Sbjct:  481 DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEVQRDRVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEKDEFEHKRKELEQVCNPIITGLYQGAGGPGAGG 621          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQG-GASG 745
            DANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                  KN+LE+YA+NM++ V DE   GKL  ADK+K+     E I WLD N                 +C+PII+ +YQG GA G
Sbjct:  481 DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGAPG 618          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS71A_MOUSE (Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hspa1a PE=1 SV=2)

HSP 1 Score: 117.472 bits (293), Expect = 7.914e-26
Identity = 66/138 (47.83%), Postives = 81/138 (58.70%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQG-GASG 745
            DANGIL+V+A DK+ G  N+ITITNDKGRLSKEEIERMVQ                  KN+LE+YA+NM++ V DE   GKL  ADK+K+     E I WLD N                 +C+PII+ +YQG GA G
Sbjct:  481 DANGILNVTATDKSTGKANKITITNDKGRLSKEEIERMVQEAERYKAEDEVQRDRVAAKNALESYAFNMKSAVEDEGLKGKLSEADKKKVLDKCQEVISWLDSNTLADKEEFVHKREELERVCSPIISGLYQGAGAPG 618          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HSP70_NEUCR (Heat shock 70 kDa protein OS=Neurospora crassa GN=hsps-1 PE=2 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 1.034e-25
Identity = 66/141 (46.81%), Postives = 82/141 (58.16%), Query Frame = -1
Query:  326 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMY-QGGASGDVP 745
            DANGI++VSA +K  G  NQITITNDKGRLSKEEIERM+                   KN LE+YAY++RNT+ D K   KLD ADK+K++  ID+ + WLD NQ                + NPI+ K Y  GGA G +P
Sbjct:  480 DANGIMNVSALEKGTGKTNQITITNDKGRLSKEEIERMLAEAEKFKEEDEAEAKRVAAKNGLESYAYSLRNTLSDSKVDEKLDAADKEKLKSEIDKIVAWLDENQQATREEYEERQKELEAIANPIMMKFYGAGGAPGGMP 620          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP1_ARATH (Luminal-binding protein 1 OS=Arabidopsis thaliana GN=At5g28540 PE=1 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.763e-25
Identity = 66/140 (47.14%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK +G   +ITITN+KGRLS+EEI+RMV+                  +N+LE Y YNM+N V D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  512 DANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVNDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPG 651          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: BIP2_ARATH (Luminal-binding protein 2 OS=Arabidopsis thaliana GN=At5g42020 PE=1 SV=2)

HSP 1 Score: 115.931 bits (289), Expect = 2.303e-25
Identity = 66/140 (47.14%), Postives = 83/140 (59.29%), Query Frame = -1
Query:  335 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRD-EKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQ--GGASG 745
            DANGIL+V AEDK +G   +ITITN+KGRLS+EEI+RMV+                  +N+LE Y YNM+N V D +K A KL+  +K+KIE A  EA+EWLD NQ                +CNPII  +YQ  GGA G
Sbjct:  512 DANGILNVKAEDKASGKSEKITITNEKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNALETYVYNMKNQVSDKDKLADKLEGDEKEKIEAATKEALEWLDENQNSEKEEYDEKLKEVEAVCNPIITAVYQRSGGAPG 651          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25
Identity = 62/136 (45.59%), Postives = 83/136 (61.03%), Query Frame = -1
Query:  344 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMY--QGG 745
            DANGIL+VSAEDK+ G K++ITITNDKGRL+ E+IE+MV+                  KN LENYAY +R+T++D+K A KL   D++ +E+  DEAI WL  N                 +C+PII+K+Y  QGG
Sbjct:  480 DANGILNVSAEDKSTGNKHKITITNDKGRLTAEQIEKMVKDAEMFKAQDEAQREVVESKNKLENYAYTVRSTIKDDKIAAKLSKEDRKTVEEKSDEAINWLHANDSATKEEYEKAMKDLEAVCSPIISKVYGQQGG 615          
BLAST of CN188339 vs. ExPASy Swiss-Prot
Match: HS7C1_DICDI (Heat shock cognate 70 kDa protein 1 OS=Dictyostelium discoideum GN=hspB PE=1 SV=2)

HSP 1 Score: 115.546 bits (288), Expect = 3.007e-25
Identity = 60/134 (44.78%), Postives = 80/134 (59.70%), Query Frame = -1
Query:  344 DANGILHVSAEDKTAGVKNQITITNDKGRLSKEEIERMVQXXXXXXXXXXXXXXXXXXKNSLENYAYNMRNTVRDEKFAGKLDPADKQKIEKAIDEAIEWLDGNQXXXXXXXXXXXXXXXXLCNPIIAKMYQGG 745
            DANGIL+VSAEDK+ G K +ITITNDKGRLSKEEIE+MV                   KN LENYA+ ++N+++DEK A K+  +DK  IE   +  ++WL+ NQ                + NPI++K+YQ G
Sbjct:  479 DANGILNVSAEDKSTGNKQKITITNDKGRLSKEEIEKMVADAEKFKQQDEQQKDRVESKNKLENYAFTVKNSIKDEKVAAKISDSDKSTIESETESVLKWLESNQTAEKDEYEDKMKALEAVVNPIMSKLYQEG 612          
The following BLAST results are available for this feature:
BLAST of CN188339 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 165
Match NameE-valueIdentityDescription
HS71A_PIG6.060e-2647.14Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA... [more]
BIP_SOLLC6.060e-2647.86Luminal-binding protein OS=Solanum lycopersicum PE... [more]
HSP71_CANFA7.914e-2646.81Heat shock 70 kDa protein 1 OS=Canis familiaris GN... [more]
HS71B_MOUSE7.914e-2647.83Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]
HS71A_MOUSE7.914e-2647.83Heat shock 70 kDa protein 1A OS=Mus musculus GN=Hs... [more]
HSP70_NEUCR1.034e-2546.81Heat shock 70 kDa protein OS=Neurospora crassa GN=... [more]
BIP1_ARATH1.763e-2547.14Luminal-binding protein 1 OS=Arabidopsis thaliana ... [more]
BIP2_ARATH2.303e-2547.14Luminal-binding protein 2 OS=Arabidopsis thaliana ... [more]
HS7C2_DICDI3.007e-2545.59Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HS7C1_DICDI3.007e-2544.78Heat shock cognate 70 kDa protein 1 OS=Dictyosteli... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N24_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188339 ID=CN188339; Name=CN188339; organism=Citrus sinensis; type=EST; length=745bp
TTTTTTTTTTTTTTTTTAGAGCTCAAATTTTTATTGTAATTTGATATTCA
AGTAAACTATAGGTACATAGCAGAGCATTCAGACAACTATAGATTACATC
ACTATAGTAACATGAGTAACCCCTCAAACCTAATGTATATCATACACAGG
TATTCGCCCTCGAGCATCAGCAAAAACGGAGCCACAACAGATGAGTCCCA
AAACAGAGCACTCTATGACTCTCATTCATGCCTTAGTCAACTTCCTCAAT
CTTAGGTCCGCCACCTGCACCGCCAGTCTCTGCCTTGCCATGGCCGCCTC
CCGGCATCTCGGCACCACCACCCATCGGTACGTCCCCACTAGCCCCGCCT
TGATACATCTTTGCAATAATTGGGTTGCACAAGCCTTCCAACTCCTTCAA
CTTGTCCTCCAATTCATCAACCTCAGCCAATTGGTTCCCATCAAGCCACT
CAATAGCCTCATCAATGGCCTTCTCTATCTTCTGCTTGTCAGCCGGGTCT
AGTTTTCCCGCAAACTTCTCATCTCTCACAGTGTTCCTCATGTTATAAGC
ATAATTCTCCAATGAGTTCTTGGCCTCTACTTTCTTCTTTACCTCTTCAT
CCTCTGCCTTGTACTTCTCTGCCTCTTGCACCATTCTCTCAATTTCCTCC
TTGCTCAATCTTCCCTTATCGTTGGTGATTGTAATCTGGTTCTTCACTCC
AGCAGTCTTATCTTCTGCGGAGACATGCAATATACCATTAGCATC
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