CN188334

Overview
NameCN188334
Unique NameCN188334
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length757
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP72_USTMA (Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=UMS2 PE=3 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 49/153 (32.03%), Postives = 79/153 (51.63%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            AIGID+GT+   +A W    VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR   D  V +  K  PF  +   +G +P I        ++ TPEE+ ++ L+++R  AE  L   +++ V+T+P  F+  Q
Sbjct:    4 AIGIDLGTTYSCVAVWQNDRVEVIANDQGNRTTPSYVAFTDSERLIGDAAK--NQVAMNPHNTVFDAKRLIGRKFDDAEVQSDMKHWPF--EVTSVGGKPQIRIEYKGEKKTFTPEEISSMVLLKMRETAEAYLGGTVKDAVVTVPAYFNDSQ 152          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 48/153 (31.37%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   DPVV +  K  PF  Q ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPF--QVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQ 154          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP71_HUMAN (Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN=HSPA1A PE=1 SV=5)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 48/153 (31.37%), Postives = 81/153 (52.94%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   DPVV +  K  PF  Q ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPF--QVINDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQ 154          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_AJECA (Heat shock 70 kDa protein OS=Ajellomyces capsulata GN=HSP70 PE=3 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 48/153 (31.37%), Postives = 76/153 (49.67%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            A+GID+GT+   +  +    +E+I N +  +   S+V F D     G + +  ++  M     +F+ KRLIGR   DP V A  K  PF +   D G +P I        +  TPEE+ ++ L ++R  AE  L   + N V+T+P  F+  Q
Sbjct:    4 AVGIDLGTTYSCVGIFRDDRIEIIANDQGNRTTPSFVAFTDTERLIGDAAK--NQVAMNPANTVFDAKRLIGRKFADPEVQADMKHFPFKI--TDKGGKPVIQVEFKGETKEFTPEEISSMVLTKMRETAEAYLGGTVNNAVVTVPAYFNDSQ 152          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71A_BOVIN (Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA1A PE=2 SV=2)

HSP 1 Score: 77.0258 bits (188), Expect = 1.221e-13
Identity = 48/154 (31.17%), Postives = 82/154 (53.25%), Query Frame = 1
Query:  271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   DPVV +  K  PF V  ++ G +P +        ++  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    5 MAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFRV--INDGDKPKVQVSYKGETKAFYPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQ 154          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP76_SAGOE (Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN=HSPA6 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 48/155 (30.97%), Postives = 79/155 (50.97%), Query Frame = 1
Query:  268 EIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            E+A+GID+GT+   +  +    VE++ N +  +   SYV F D     G + +       L+   +F+ KRLIGR   D  V A  K  PF  Q V  G +P +        +S  PEE+ ++ L +++  AE  L +P+++ V+T+P  F+  Q
Sbjct:    6 ELAVGIDLGTTYSCVGVFQQGRVEILANDQGNRTTPSYVAFTDTERLVGDAAKSQAALNPLN--TVFDAKRLIGRKFADATVQADMKHWPF--QVVSEGCKPKVRVSYRGEDKSFYPEEISSMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQ 156          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_XENLA (Heat shock 70 kDa protein OS=Xenopus laevis PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 49/154 (31.82%), Postives = 78/154 (50.65%), Query Frame = 1
Query:  271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +A+GID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR   DPVV    K  PF  Q V    +P +        +S  PEE+ ++ L +++  AE  L  P+ N V+T+P  F+  Q
Sbjct:    6 VAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNPQNTVFDAKRLIGRKFNDPVVQCDLKHWPF--QVVSDEGKPKVKVEYKGEEKSFFPEEISSMVLTKMKETAEAYLGHPVTNAVITVPAYFNDSQ 155          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_PLAFA (Heat shock 70 kDa protein OS=Plasmodium falciparum PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 50/164 (30.49%), Postives = 81/164 (49.39%), Query Frame = 1
Query:  247 KTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKD--EVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            K + P   IAIGID+GT+   +  W    V++I N +  +   SYV F D   +       Q++   E      +F+ KRLIGR  T+  V +  K  PF V++  +  +P I        +   PEE+ ++ L +++  AE  L + I+N V+T+P  F+  Q
Sbjct:    8 KPNLPESNIAIGIDLGTTYSCVGVWRNENVDIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVARNPE----NTVFDAKRLIGRKFTESSVQSDMKHWPFTVKS-GVDEKPMIEVTYQGEKKLFHPEEISSMVLQKMKENAEAFLGKSIKNAVITVPAYFNDSQ 166          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 51/153 (33.33%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            +IGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  M     +F+ KRLIGR   D VV A  K  PF V  V  G +P +        +S  PEE+ ++ LV++R +AE  L + + N V+T+P  F+  Q
Sbjct:    8 SIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNPNNTVFDAKRLIGRKFNDQVVQADMKHWPFKV--VSDGGKPKVQVDYKGENKSFNPEEISSMVLVKMREIAEAYLGQKVSNAVITVPAYFNDSQ 156          
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71B_MOUSE (Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hspa1b PE=1 SV=3)

HSP 1 Score: 76.6406 bits (187), Expect = 1.594e-13
Identity = 50/153 (32.68%), Postives = 80/153 (52.29%), Query Frame = 1
Query:  274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729
            AIGID+GT+   +  +   +VE+I N +  +   SYV F D     G + +  ++  +     +F+ KRLIGR   D VV +  K  PF  Q V+ G +P +        RS  PEE+ ++ L +++ +AE  L  P+ N V+T+P  F+  Q
Sbjct:    6 AIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDAVVQSDMKHWPF--QVVNDGDKPKVQVNYKGESRSFFPEEISSMVLTKMKEIAEAYLGHPVTNAVITVPAYFNDSQ 154          
The following BLAST results are available for this feature:
BLAST of CN188334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 145
Match NameE-valueIdentityDescription
HSP72_USTMA1.221e-1332.03Heat shock 70 kDa protein 2 OS=Ustilago maydis GN=... [more]
HSP71_PONAB1.221e-1331.37Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]
HSP71_HUMAN1.221e-1331.37Heat shock 70 kDa protein 1A/1B OS=Homo sapiens GN... [more]
HSP70_AJECA1.221e-1331.37Heat shock 70 kDa protein OS=Ajellomyces capsulata... [more]
HS71A_BOVIN1.221e-1331.17Heat shock 70 kDa protein 1A OS=Bos taurus GN=HSPA... [more]
HSP76_SAGOE1.594e-1330.97Heat shock 70 kDa protein 6 OS=Saguinus oedipus GN... [more]
HSP70_XENLA1.594e-1331.82Heat shock 70 kDa protein OS=Xenopus laevis PE=2 S... [more]
HSP70_PLAFA1.594e-1330.49Heat shock 70 kDa protein OS=Plasmodium falciparum... [more]
HSP70_ONCTS1.594e-1333.33Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
HS71B_MOUSE1.594e-1332.68Heat shock 70 kDa protein 1B OS=Mus musculus GN=Hs... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N21_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188334 ID=CN188334; Name=CN188334; organism=Citrus sinensis; type=EST; length=757bp
AGTAGAACCCGCCTTTTCGTAGAAGTACTAGTTGATAATAATACACATAA
CGAAGTGCTCTCGTTTCGCTTAAAACTGAAAAGCTCTGGCAGTTTCCATT
CCAAGGCTCGATTGCTACTCTTCAGCTTTCTTTGCTTTCTGCTCGCTTTC
TCTAAACAATCTCTAACATTGCAAATCTGTAAAAACACAGGAATGGCTGA
ACCAGCGTACACTGTGGCTTCTGATACTGAAACAACAGGAGAAGAAAAGA
CCTCATCCCCTTTTCCTGAAATTGCAATTGGAATTGACATAGGTACTTCA
CAATGCAGTATTGCATTCTGGAATGGCTCTGAAGTAGAGCTTATTAAGAA
CACAAGAAACCAGAAGGTGATGCGTTCATATGTCACCTTCAAGGATGAAG
TTCCTGCAGGTGGAGTCAGCACTCAACTCTCCCATGAACATGAAATGTTA
TCTGGAGCTGCTATTTTCAACATGAAACGCTTAATCGGCAGAGTTGACAC
CGATCCTGTGGTCCATGCAAGCAAAAGCTTACCGTTTTTGGTCCAAACCG
TGGACATTGGTGTTCGTCCATTTATTGCAGCCTTAGTGAACAATGCGTGG
AGATCCACCACTCCCGAAGAAGTCCTGGCAATATTTTTGGTGGAACTAAG
AGCCATGGCTGAAACTCAGTTGAAACGCCCAATAAGAAATGTTGTTCTAA
CCATTCCAGTTTCATTCAGTCGTTTCCAACTGACACGCATTGAACGAGCA
TGTGCTA
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