CN188334
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP73_ARATH (Heat shock cognate 70 kDa protein 3 OS=Arabidopsis thaliana GN=HSC70-3 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 48/153 (31.37%), Postives = 78/153 (50.98%), Query Frame = 1 Query: 274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 AIGID+GT+ + W VE+I N + + SYV F D G + + ++ M +F+ KRLIGR TD V + K PF +++ +P I + + EE+ ++ L+++R +AE L I+N V+T+P F+ Q Sbjct: 9 AIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDSERLIGDAAK--NQVAMNPINTVFDAKRLIGRRFTDSSVQSDIKLWPFTLKS-GPAEKPMIVVNYKGEDKEFSAEEISSMILIKMREIAEAYLGTTIKNAVVTVPAYFNDSQ 158
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HSP70_BRELC (Heat shock 70 kDa protein OS=Bremia lactucae GN=HSP70 PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 46/154 (29.87%), Postives = 81/154 (52.60%), Query Frame = 1 Query: 274 AIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPF-IAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 ++GID+GT+ + W VE+I N + + SYV F D G + + ++ M + +F+ K LIGR +DP+V A K PF + + G R I ++ PEE+ ++ L+++R +AE + + ++N V+T+P F+ Q Sbjct: 9 SVGIDLGTTYSCVGVWQNDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNAHNTVFDAKPLIGRKFSDPIVQADIKHWPFKLTS---GWRQAQIVVQFKGESKTFQPEEISSMVLIKMREVAEAFIGKEVKNAVITVPAYFNDSQ 157
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71L_MOUSE (Heat shock 70 kDa protein 1-like OS=Mus musculus GN=Hspa1l PE=2 SV=4) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHASKSL-PFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 +AIGID+GT+ + + +VE+I N + + SYV F D G + + ++ M +F+ KRLIGR DPVV + L PF Q ++ +P + ++ PEE+ ++ L +++ AE L + N V+T+P F+ Q Sbjct: 7 MAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAK--NQVAMNPQNTVFDAKRLIGRKFNDPVVQSDMKLWPF--QVINEAGKPKVMVSYKGEKKAFYPEEISSMVLTKMKETAEAFLGHNVTNAVITVPAYFNDSQ 156
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: HS71A_PIG (Heat shock 70 kDa protein 1A OS=Sus scrofa GN=HSPA1A PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 1 Query: 271 IAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 +AIGID+GT+ + + +VE+I N + + S V F D G + + ++ + +F+ KRLIGR DPVV K PF V ++ G +P + + PEE+ ++ L +++ +AE L P+ N V+T+P F+ Q Sbjct: 5 VAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSSVAFTDTERLIGDAAK--NQVALNPQNTVFDAKRLIGRKFGDPVVQGDMKHWPFRV--INDGDKPKVQVSYKGETKGFYPEEISSMVLTKMKEIAEGYLGHPVSNAVITVPAYFNDSQ 154
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 241 EEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 EE+ +GID+GT+ + + VE+I N + ++ SYV F E + QL+ E +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q Sbjct: 19 EEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE----NTVFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 180
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_RAT (78 kDa glucose-regulated protein OS=Rattus norvegicus GN=Hspa5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 241 EEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 EE+ +GID+GT+ + + VE+I N + ++ SYV F E + QL+ E +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q Sbjct: 19 EEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE----NTVFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 180
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_PICAN (78 kDa glucose-regulated protein homolog OS=Pichia angusta GN=BiP PE=3 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 48/154 (31.17%), Postives = 82/154 (53.25%), Query Frame = 1 Query: 277 IGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDEVPAGGVSTQLSHEHEMLSGAA--IFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRSTTPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 IGID+GT+ + VE+I N + ++ SYV F ++ G + + +++ S IF++KRLIG D V+ K LP+ V+ D RP + A VN ++ T EE+ A+ L +++ +AE L + + + V+T+P F+ Q Sbjct: 43 IGIDLGTTYSCVGVMKAGRVEIIPNDQGNRITPSYVAFTEDERLVGDAAK----NQIASNPTNTIFDIKRLIGHRFDDKVIQKEIKHLPYKVKDQD--GRPVVEAKVNGELKTFTAEEISAMILGKMKQIAEDYLGKKVTHAVVTVPAYFNDAQ 190
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_MOUSE (78 kDa glucose-regulated protein OS=Mus musculus GN=Hspa5 PE=1 SV=3) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 241 EEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 EE+ +GID+GT+ + + VE+I N + ++ SYV F E + QL+ E +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q Sbjct: 20 EEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE----NTVFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 181
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_MESAU (78 kDa glucose-regulated protein OS=Mesocricetus auratus GN=HSPA5 PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 241 EEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 EE+ +GID+GT+ + + VE+I N + ++ SYV F E + QL+ E +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q Sbjct: 19 EEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE----NTVFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 180
BLAST of CN188334 vs. ExPASy Swiss-Prot
Match: GRP78_HUMAN (78 kDa glucose-regulated protein OS=Homo sapiens GN=HSPA5 PE=1 SV=2) HSP 1 Score: 72.7886 bits (177), Expect = 2.302e-12 Identity = 51/168 (30.36%), Postives = 80/168 (47.62%), Query Frame = 1 Query: 241 EEKTSSPFPEIAIGIDIGTSQCSIAFWNGSEVELIKNTRNQKVMRSYVTFKDE---VPAGGVSTQLSHEHEMLSGAAIFNMKRLIGRVDTDPVVHAS-KSLPFLVQTVDIGVRPFIAALVNNAWRST-TPEEVLAIFLVELRAMAETQLKRPIRNVVLTIPVSFSRFQ 729 EE+ +GID+GT+ + + VE+I N + ++ SYV F E + QL+ E +F+ KRLIGR DP V K LPF V V+ +P+I + T PEE+ A+ L +++ AE L + + + V+T+P F+ Q Sbjct: 19 EEEDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAAKNQLTSNPE----NTVFDAKRLIGRTWNDPSVQQDIKFLPFKV--VEKKTKPYIQVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQ 180 The following BLAST results are available for this feature:
BLAST of CN188334 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 145
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188334 ID=CN188334; Name=CN188334; organism=Citrus sinensis; type=EST; length=757bpback to top |