CN188333

Overview
NameCN188333
Unique NameCN188333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4022 contig Csv1_Contig4022:2..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: GRP78_ASPKA (78 kDa glucose-regulated protein homolog OS=Aspergillus kawachi GN=bipA PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.102e-30
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L++      +  +GINP EA   GAA++G V SG     G  D++ + V PL +GI   G     +IPRNT +P RK  +F+T  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ +L+V
Sbjct:  387 IPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEE---GTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEVSFDLDANGILKV 530          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: GRP78_ASPAW (78 kDa glucose-regulated protein homolog OS=Aspergillus awamori GN=bipA PE=2 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.102e-30
Identity = 67/147 (45.58%), Postives = 94/147 (63.95%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L++      +  +GINP EA   GAA++G V SG     G  D++ + V PL +GI   G     +IPRNT +P RK  +F+T  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ +L+V
Sbjct:  387 IPKVQALLEEFFGGKKASKGINPDEAVAFGAAVQGGVLSGEE---GTGDVVLMDVNPLTLGIETTGGVMTKLIPRNTVIPTRKSQIFSTAADNQPTVLIQVYEGERSLTKDNNLLGKFELTGIPPAPRGVPQIEVSFDLDANGILKV 530          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_MAIZE (Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=3 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.189e-29
Identity = 69/147 (46.94%), Postives = 96/147 (65.31%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L Q      EL + INP EA   GAA++ A+ SG  +     DLL + VTPL +G+   G     +IPRNTT+P +K+ VF+T  DNQ   LI VYEGE  + ++N+LLG F+++GIPP+P+GVP+I V  DID +++L V
Sbjct:  347 IPKVQQL-QDFFNGKELCKSINPDEAVAYGAAVQAAILSGEGNE--RSDLLLLDVTPLSLGLETAGGVMTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQITVTFDIDVNNILNV 490          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP71_PICAN (Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 PE=1 SV=2)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK++ LV       E  + INP EA   GAA++ A+ +G +      DLL + V PL +GI   G     +IPRNTT+P +K  +F+T  DNQ   LI VYEGE  K ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  343 IPKIQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTG-DTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERAKTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HS7C2_DICDI (Heat shock cognate 70 kDa protein 2 OS=Dictyostelium discoideum GN=hspE-1 PE=1 SV=1)

HSP 1 Score: 129.798 bits (325), Expect = 1.552e-29
Identity = 69/161 (42.86%), Postives = 98/161 (60.87%), Query Frame = -2
Query:  266 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 745
            IPKV+ L+Q      EL + INP EA   GAA++ A+ S  N+    + D+L + V PL +G+   G     +IPRNTT+P +K+  F+T  DNQ+  L+ VYEGE     +N+LLG F++T IPP+P+GVP+I V  DIDA+ +L V       GN H +
Sbjct:  342 IPKVQQLLQDHFNGKELNKSINPDEAVAYGAAVQAAILS--NEGGAKVADILLLDVAPLSMGLETAGGVMTTLIPRNTTIPCKKNQTFSTYSDNQTGVLVQVYEGERAMTRDNNLLGKFELTNIPPAPRGVPQIEVTFDIDANGILNVSAEDKSTGNKHKI 500          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_EMENI (Heat shock 70 kDa protein OS=Emericella nidulans GN=hsp70 PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.028e-29
Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK++ LV     K E  + INP EA   GAA++ A+ SG        ++L + V PL +GI   G    P++ RNTT+P +K   F+T  DNQ   LI VYEGE  + ++N+LLG F++TGIPP+P+GVP+I V  D+DA+ ++ V
Sbjct:  341 IPKIQRLVSDYFNK-EANKSINPDEAVAYGAAVQAAILSGDTSSKSTNEILLLDVAPLSVGIETAGGVMTPLVKRNTTIPTKKSETFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELTGIPPAPRGVPQIEVTFDLDANGIMNV 486          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP72_PICAN (Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 PE=3 SV=2)

HSP 1 Score: 129.028 bits (323), Expect = 2.648e-29
Identity = 67/147 (45.58%), Postives = 93/147 (63.27%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ LV       E  + INP EA   GAA++ A+ +G +      DLL + V PL +GI   G     +IPRNTT+P +K  +F+T  DNQ   LI VYEGE  + ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  341 IPKVQKLVSDFFNGKEPNKSINPDEAVAYGAAVQAAILTG-DTSSKTQDLLLLDVAPLSLGIETAGGVMTKLIPRNTTIPTKKSEIFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 486          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_PYRSA (Heat shock 70 kDa protein OS=Pyrenomonas salina GN=HSP70 PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.648e-29
Identity = 66/147 (44.90%), Postives = 95/147 (64.63%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L+       EL + INP EA   GAA++ A+ +G  D    +DLL + V+PL +G+   G     +I RNTT+P +K  VF+T  DNQ   LI V+EGE  + ++N++LG F++TGIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  350 IPKVQQLLIDYFNGKELCKNINPDEAVAYGAAVQAAILAG--DTSEKMDLLLLDVSPLSLGLETAGGVMTVLIKRNTTIPTKKTQVFSTYADNQPGVLIQVFEGERSRTKDNNILGKFELTGIPPAPRGVPQIEVTFDIDANGILNV 494          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_ONCTS (Heat shock 70 kDa protein OS=Oncorhynchus tschawytscha GN=hsp70 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.459e-29
Identity = 69/148 (46.62%), Postives = 95/148 (64.19%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L+Q      EL + INP EA   GAA++ A+ SG  D   N+ DLL + V PL +GI   G     +I RNTT+P+++   FTT  DNQ   +I VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  345 IPKVQKLLQDFFNGRELNKSINPDEAVAYGAAIQAAILSG--DKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFTTYSDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 490          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: GRP78_XENLA (78 kDa glucose-regulated protein OS=Xenopus laevis GN=hspa5 PE=2 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 3.459e-29
Identity = 69/160 (43.12%), Postives = 93/160 (58.13%), Query Frame = -2
Query:  266 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 745
            IPK++ LV+      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV       GN + +
Sbjct:  369 IPKIQQLVKELFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKI 525          
The following BLAST results are available for this feature:
BLAST of CN188333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
GRP78_ASPKA9.102e-3045.5878 kDa glucose-regulated protein homolog OS=Asperg... [more]
GRP78_ASPAW9.102e-3045.5878 kDa glucose-regulated protein homolog OS=Asperg... [more]
HSP70_MAIZE1.189e-2946.94Heat shock 70 kDa protein OS=Zea mays GN=HSP70 PE=... [more]
HSP71_PICAN1.552e-2945.58Heat shock protein 70 1 OS=Pichia angusta GN=HSA1 ... [more]
HS7C2_DICDI1.552e-2942.86Heat shock cognate 70 kDa protein 2 OS=Dictyosteli... [more]
HSP70_EMENI2.028e-2943.54Heat shock 70 kDa protein OS=Emericella nidulans G... [more]
HSP72_PICAN2.648e-2945.58Heat shock protein 70 2 OS=Pichia angusta GN=HSA2 ... [more]
HSP70_PYRSA2.648e-2944.90Heat shock 70 kDa protein OS=Pyrenomonas salina GN... [more]
HSP70_ONCTS3.459e-2946.62Heat shock 70 kDa protein OS=Oncorhynchus tschawyt... [more]
GRP78_XENLA3.459e-2943.1378 kDa glucose-regulated protein OS=Xenopus laevis... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188333 ID=CN188333; Name=CN188333; organism=Citrus sinensis; type=EST; length=749bp
TTTTTNTTTTTTTTTTTCATCAAAACAGCCTCTATTATTTCTTTATGATG
CAAACTCACAAAGTAAATTTTTCTGAAGGATACAGACTCATATGCATACA
ACGCTTGAAAATATTAAAAAGCAATCAAATTTCAAGACACCATTACATTT
TCTTCGGCTGCACTGTCTCAAGGTCTAGAGTGGATCCATAAGCCCTGTTT
AGAGCTTCAGCACACCAGCCATGTCCATCATCAACCGTTGGCAGTCTCAC
TTCCATTACAGGAATCACTGGATGTGGGTTGCCAGGCATAATGACCCCAA
CCAAAACTCTCAGCACACTCGAGGCATCAATGTCCATGCACACATTTATT
TCTGGTACTCCTTTGGGAGAGGGAGGAATTCCTGTTATCTTGAAATAGCC
TAGAAGATGATTCTCTTCTACCTTCTCCCCTTCACCTTCATAAACAATAA
TCAGCGCCTCAGACTGGTTGTCGCGAACTGTTGTGAAGACCAGATCTTTC
CGTGCTGGCATCGTGGTGTTTCTAGGAATGATGGGTACAAAGTTGTTGCC
ATTAGCTCGTATACCAATGCCAAGTGGTGTGACTTGGATGGTTAACAGGT
CCAGGTTCCCAAATGGATCGTTAATGCCTGAAGTCACTGCTCCTTCCAGA
GCTGCCCCACTAACTGCTGCTTCCAATGGGTTAATACCCTCATAGAGTTC
TACTTTTTTGCATGTACTCTGGACAAGATTCCTTACTTTTGGAATATAT
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