CN188333

Overview
NameCN188333
Unique NameCN188333
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length749
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig4022 contig Csv1_Contig4022:2..750. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP72_CANAL (Heat shock protein SSA2 OS=Candida albicans GN=SSA2 PE=1 SV=3)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 66/147 (44.90%), Postives = 91/147 (61.90%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ LV       E    INP EA   GAA++ A+ SG +      DLL + V PL +GI   G     +IPRN+T+P +K   F+T  DNQ   LI V+EGE  + ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  341 IPKVQKLVSDYFNGKEPNRSINPDEAVAYGAAVQAAILSG-DTSSKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERAQTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 486          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_PLEWA (Heat shock 70 kDa protein OS=Pleurodeles waltlii GN=HSP70 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 67/148 (45.27%), Postives = 93/148 (62.84%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK++ L+Q      EL + INP EA   GAA++ A+  G  D   NL DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  345 IPKIQKLLQDFFNGRELNKSINPDEAVAYGAAVQAAILMG--DKSENLQDLLLLDVAPLSLGLETAGGVMTVLIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNSLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 490          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP70_ONCVO (Heat shock 70 kDa protein (Fragment) OS=Onchocerca volvulus PE=2 SV=2)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L+       EL + INP EA   GAA++ A+ SG        DLL + V PL +GI   G     +I RNTT+P +    FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  100 IPKVQKLLSDFFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQ-DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTSQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 245          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: GRP78_SPETR (78 kDa glucose-regulated protein OS=Spermophilus tridecemlineatus GN=HSPA5 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 68/160 (42.50%), Postives = 92/160 (57.50%), Query Frame = -2
Query:  266 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRVLVGVIMPGNPHPV 745
            IPK++ LV+      E   GINP EA   GAA++  V SG  D     DL+ + V PL +GI   G     +IPRNT +P +K  + +T  DNQ    I VYEGE    ++NHLLG F +TGIPP+P+GVP+I V  +ID + +LRV       GN + +
Sbjct:  368 IPKIQQLVKEFFNGKEPSRGINPDEAVAYGAAVQAGVLSGDQDTG---DLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQISSTASDNQPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKGTGNKNKI 524          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: GRP78_ECHMU (78 kDa glucose-regulated protein OS=Echinococcus multilocularis GN=GRP78 PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 63/147 (42.86%), Postives = 89/147 (60.54%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK++ LV+      E   GINP EA   GAA++  V SG+ D     D++ + V PL +GI   G     +IPRNT +P +K  +F+T  DNQ    I V+EGE    ++NH LG F +TGIPP+P+G+P+I V  +ID + +LRV
Sbjct:  367 IPKIQQLVKEFFNVKEPSRGINPDEAVAYGAAVQAGVISGVEDTG---DIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADNQPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRV 510          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: DNAK_THEYD (Chaperone protein dnaK OS=Thermodesulfovibrio yellowstonii (strain ATCC 51303 / DSM 11347 / YP87) GN=dnaK PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.824e-28
Identity = 65/146 (44.52%), Postives = 91/146 (62.33%), Query Frame = -2
Query:  305 PKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 742
            PKV+ +VQ    K E ++G+NP E    GAA++ A+  G        ++L + VTPL +GI   G  F  II RNTT+P +K  +FTT  DNQ+   I VY+GE E   +N LLG F++ GIPP+P+G+P+I V  DIDA+ +L V
Sbjct:  342 PKVQKVVQDFFGK-EPHKGVNPDEVVAVGAAIQAAILKGEVK-----EVLLLDVTPLSLGIETLGGVFTKIIERNTTIPTKKSQIFTTAADNQTAVTIKVYQGEREMAADNKLLGVFELVGIPPAPRGIPQIEVTFDIDANGILHV 481          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP7A_CAEEL (Heat shock 70 kDa protein A OS=Caenorhabditis elegans GN=hsp-1 PE=1 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.994e-28
Identity = 67/147 (45.58%), Postives = 89/147 (60.54%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L+       EL + INP EA   GAA++ A+ SG        DLL + V PL +GI   G     +I RNTT+P +    FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  344 IPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEAVQ-DLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNV 489          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP73_YEAST (Heat shock protein SSA3 OS=Saccharomyces cerevisiae GN=SSA3 PE=1 SV=3)

HSP 1 Score: 124.79 bits (312), Expect = 4.994e-28
Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNLDLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK++ LV       E    INP EA   GAA++ A+ +G +      DLL + V PL +GI   G     +IPRN+T+P +K   F+T  DNQ   LI V+EGE  + ++N+LLG F+++GIPP+P+GVP+I+V  DIDA+ +L V
Sbjct:  341 IPKIQKLVSDFFNGKEPNRSINPDEAVAYGAAVQAAILTG-DQSTKTQDLLLLDVAPLSLGIETAGGIMTKLIPRNSTIPTKKSETFSTYADNQPGVLIQVFEGERTRTKDNNLLGKFELSGIPPAPRGVPQIDVTFDIDANGILNV 486          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP7C_ICTPU (Heat shock cognate 71 kDa protein OS=Ictalurus punctatus GN=hsc70 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.523e-28
Identity = 67/148 (45.27%), Postives = 92/148 (62.16%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPK+  L+Q      EL + INP EA   GAA++    S + D   N+ DL+ + VTPL +GI   G     +I RNTT+P ++   FTT  DNQ   LI VYEGE    ++N+LLG F++TGIPP+P+GVP+I V  DIDA+ ++ V
Sbjct:  343 IPKMEKLLQDFFNGKELNKSINPDEAVAYGAAVQAE--SSLGDKSENVQDLVLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNV 488          
BLAST of CN188333 vs. ExPASy Swiss-Prot
Match: HSP71_PONAB (Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSPA1 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.523e-28
Identity = 66/148 (44.59%), Postives = 94/148 (63.51%), Query Frame = -2
Query:  305 IPKVRNLVQSTCKKVELYEGINPLEAAVSGAALEGAVTSGINDPFGNL-DLLTIQVTPLGIGIRANGNNFVPIIPRNTTMPARKDLVFTTVRDNQSEALIIVYEGEGEKVEENHLLGYFKITGIPPSPKGVPEINVCMDIDASSVLRV 745
            IPKV+ L+Q      +L + INP EA   GAA++ A+  G  D   N+ DLL + V PL +G+   G     +I RN+T+P ++  +FTT  DNQ   LI VYEGE    ++N+LLG F+++GIPP+P+GVP+I V  DIDA+ +L V
Sbjct:  343 IPKVQKLLQDFFNGRDLNKSINPDEAVAYGAAVQAAILMG--DKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFTTYSDNQPGVLIQVYEGERAMTKDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNV 488          
The following BLAST results are available for this feature:
BLAST of CN188333 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
HSP72_CANAL3.824e-2844.90Heat shock protein SSA2 OS=Candida albicans GN=SSA... [more]
HSP70_PLEWA3.824e-2845.27Heat shock 70 kDa protein OS=Pleurodeles waltlii G... [more]
HSP70_ONCVO3.824e-2845.58Heat shock 70 kDa protein (Fragment) OS=Onchocerca... [more]
GRP78_SPETR3.824e-2842.5078 kDa glucose-regulated protein OS=Spermophilus t... [more]
GRP78_ECHMU3.824e-2842.8678 kDa glucose-regulated protein OS=Echinococcus m... [more]
DNAK_THEYD3.824e-2844.52Chaperone protein dnaK OS=Thermodesulfovibrio yell... [more]
HSP7A_CAEEL4.994e-2845.58Heat shock 70 kDa protein A OS=Caenorhabditis eleg... [more]
HSP73_YEAST4.994e-2843.54Heat shock protein SSA3 OS=Saccharomyces cerevisia... [more]
HSP7C_ICTPU6.523e-2845.27Heat shock cognate 71 kDa protein OS=Ictalurus pun... [more]
HSP71_PONAB6.523e-2844.59Heat shock 70 kDa protein 1 OS=Pongo abelii GN=HSP... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N21_f Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N21, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188333 ID=CN188333; Name=CN188333; organism=Citrus sinensis; type=EST; length=749bp
TTTTTNTTTTTTTTTTTCATCAAAACAGCCTCTATTATTTCTTTATGATG
CAAACTCACAAAGTAAATTTTTCTGAAGGATACAGACTCATATGCATACA
ACGCTTGAAAATATTAAAAAGCAATCAAATTTCAAGACACCATTACATTT
TCTTCGGCTGCACTGTCTCAAGGTCTAGAGTGGATCCATAAGCCCTGTTT
AGAGCTTCAGCACACCAGCCATGTCCATCATCAACCGTTGGCAGTCTCAC
TTCCATTACAGGAATCACTGGATGTGGGTTGCCAGGCATAATGACCCCAA
CCAAAACTCTCAGCACACTCGAGGCATCAATGTCCATGCACACATTTATT
TCTGGTACTCCTTTGGGAGAGGGAGGAATTCCTGTTATCTTGAAATAGCC
TAGAAGATGATTCTCTTCTACCTTCTCCCCTTCACCTTCATAAACAATAA
TCAGCGCCTCAGACTGGTTGTCGCGAACTGTTGTGAAGACCAGATCTTTC
CGTGCTGGCATCGTGGTGTTTCTAGGAATGATGGGTACAAAGTTGTTGCC
ATTAGCTCGTATACCAATGCCAAGTGGTGTGACTTGGATGGTTAACAGGT
CCAGGTTCCCAAATGGATCGTTAATGCCTGAAGTCACTGCTCCTTCCAGA
GCTGCCCCACTAACTGCTGCTTCCAATGGGTTAATACCCTCATAGAGTTC
TACTTTTTTGCATGTACTCTGGACAAGATTCCTTACTTTTGGAATATAT
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