CN188332
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_PSEAB (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=mtnA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 3 Query: 144 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L + L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAH 187
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_PSEA8 (Methylthioribose-1-phosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=mtnA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 68/186 (36.56%), Postives = 99/186 (53.23%), Query Frame = 3 Query: 144 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKD-DVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 +++I +R G+L+LLDQR LP E ++LE +A+ AIR+MVVRG V A D + L + L SRPTAVNL A ++++ + + E + A +EA I + + D N + G ++ Q + S ++LTHCNTG+LAT G+GTALGVIRA H Sbjct: 11 VKAIEWRDGTLRLLDQRLLPQEEVWLEHESAAEVAKAIRDMVVRGAPAIGISAAYGI---VLGARARLAQGGDWRAALEEDFRLLADSRPTAVNLFWALNRMRDRLERM----KEGDQPL-AVLEAEAISIHESDREANLTMAQLGMELIRKQ-QGSPQNILTHCNTGALATGGFGTALGVIRAAH 187
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_NOSP7 (Methylthioribose-1-phosphate isomerase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=mtnA PE=3 SV=1) HSP 1 Score: 97.0561 bits (240), Expect = 9.871e-20 Identity = 65/193 (33.68%), Postives = 104/193 (53.89%), Query Frame = 3 Query: 123 VSIDSNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLG--DKLEYLV-SSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRA 692 +++ +N + + + G++ L+DQ +LP E ++EI S D AI+ M+VRG L A +D FL DK+ L+ S+RPTAVNL A +++ ++ + T + + Q + A+ + +D+ T +AIG G + L K ++LTHCN G+LATAGYGTALGV+R+ Sbjct: 1 MTLSTNHVYPVIWHNGAVSLIDQTRLPNEYTFVEIHRSEDMARAIKTMIVRGAPAIGVAAAYGMY-----LGAREIETSDRHEFLQNLDKVAQLLGSTRPTAVNLFWAISRMMKVAKETLGTVED---IKQTLFQTAQAINVEDLQTCQAIGDNGLTVLP--ASPEKLTLLTHCNAGALATAGYGTALGVVRS 183
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_DESRM (Methylthioribose-1-phosphate isomerase OS=Desulfotomaculum reducens (strain MI-1) GN=mtnA PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 2.199e-19 Identity = 69/191 (36.13%), Postives = 99/191 (51.83%), Query Frame = 3 Query: 144 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLV----SSRPTAVNLSDAAAKLKEIISKAAATASEAN--SVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRALH 698 + +I + LQLLDQ KLP Y++ D AI+++ VRG V ++A D +FL +KLE + ++RPTAVNL A ++ +S TA E N + + +E A + +DV +N+ +G YG L + + VLTHCN G+LATAGYGTALGV+RA H Sbjct: 1 MNAIIWENNQLQLLDQTKLPRTIEYIQCTDYHTVGKAIKKLSVRGAPAIGAAAAYGLVVGAQQVDA-----TDRKTFL-EKLEAIAGELGATRPTAVNLRWALDRMMMRLS----TAPEQNVEDLRKIMLEEAHAIYNEDVESNRKMGEYGQELLPEEAR-----VLTHCNAGALATAGYGTALGVVRAAH 176
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_CHLTE (Methylthioribose-1-phosphate isomerase OS=Chlorobium tepidum GN=mtnA PE=3 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 60/186 (32.26%), Postives = 95/186 (51.08%), Query Frame = 3 Query: 144 LQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQ----LKNSKFSVLTHCNTGSLATAGYGTALGVIR 689 + +I ++ G+ + LDQR LPL+ I++E ++ + AI+ + VRG V +N ++G A + + + + +SRPTAVNL A K++E+ A ++F + A + D++ I +G L+ LK K +VLTHCNTG+LA G GTALGVIR Sbjct: 2 IDAISFKNGTFRYLDQRFLPLQEIHVETKNHQEAIEAIKTLAVRGAPLIGASAGYTV---VLGINEYTGDKAGFPEYFKNLIAEVNASRPTAVNLFFATKKMQEVYD-ANFENDSLEALFAKMTDMAYKIHNDEIDNCDKIARHGVELLKQDFADVLKTRKLNVLTHCNTGTLACCGIGTALGVIR 183
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_DESDA (Methylthioribose-1-phosphate isomerase OS=Desulfovibrio desulfuricans (strain ATCC 27774 / DSM 6949) GN=mtnA PE=3 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.398e-19 Identity = 66/173 (38.15%), Postives = 90/173 (52.02%), Query Frame = 3 Query: 174 LQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRA 692 L LLDQR LP + R D A++ MVVRG V L G D A+ L +E + ++RPTAVNL A +++ + A A + + A+ AA+ M +DVA K +G +GA+ +++ VLTHCN G+LATAGYGTALGVIRA Sbjct: 14 LHLLDQRLLPAQEADFVCRSVEDVVYALQTMVVRGAPAIGVTAAWGC---VLALREAQGP--DWAARLEQGMERIAAARPTAVNLRWAVERMRGVWLAAGGEAGDPAPLLTAFAHAAQTMQDEDVAVCKTLGRHGAACIEDG-----DCVLTHCNAGALATAGYGTALGVIRA 176
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_XANC5 (Methylthioribose-1-phosphate isomerase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=mtnA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 68/195 (34.87%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 117 DSVSIDS---NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRA 692 DS ID + ++ + + +L+LLDQRKLP E ++ S AI + VRG + ++ A G+AA L L L ++RPTAVNL+ A +++ ++ A A E + A+ + +D+A N+ +G+ GA+ + VLTHCNTGSLATAG+GTALGVIRA Sbjct: 3 DSAHIDYARYDHIRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAARDIAADDGSAA--LQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIA------REAQAIADEDLAANRHMGALGAALIA-----PGSGVLTHCNTGSLATAGFGTALGVIRA 184
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_XANAC (Methylthioribose-1-phosphate isomerase OS=Xanthomonas axonopodis pv. citri GN=mtnA PE=3 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.357e-19 Identity = 68/195 (34.87%), Postives = 101/195 (51.79%), Query Frame = 3 Query: 117 DSVSIDS---NSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRA 692 DS ID + ++ + + +L+LLDQRKLP E ++ S AI + VRG + ++ A G+AA L L L ++RPTAVNL+ A +++ ++ A A E + A+ + +D+A N+ +G+ GA+ + VLTHCNTGSLATAG+GTALGVIRA Sbjct: 3 DSAHIDYARYDHIRPLLWTGDALELLDQRKLPFEVAHVRCDSSDAVAEAIHSLAVRGAPAIGIAAGWGVVLAARDIAADDGSAA--LQKLEPALLRLNAARPTAVNLAWALMRMRRVLGAAGADWREVIA------REAQAIADEDLAANRHMGALGAALIA-----PGSGVLTHCNTGSLATAGFGTALGVIRA 184
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_NITOC (Methylthioribose-1-phosphate isomerase OS=Nitrosococcus oceani (strain ATCC 19707 / NCIMB 11848) GN=mtnA PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.091e-18 Identity = 64/189 (33.86%), Postives = 99/189 (52.38%), Query Frame = 3 Query: 123 VSIDSNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIR 689 +S + + ++++ + ++LLDQR+LP E IY I +D AI +MVVRG V + FS + L L L ++RPTA+NL+ A A+++ II + A + A + ++D+A N+ +G G + ++ + VLTHCNTGSLAT G+GTALGVIR Sbjct: 1 MSAEHDQIRAVAWTGAGVRLLDQRRLPQEEIYWTIACVSDVAQAITKMVVRGAPAIGIAAAYG--VVLAARARFSEAGSGWKQLLEADLCDLEAARPTAINLAWALARMQAIIQGLP----DHRDPESALLVEARCIHEEDIAANRRMGELGTTLIEGSV-----GVLTHCNTGSLATGGFGTALGVIR 178
BLAST of CN188332 vs. ExPASy Swiss-Prot
Match: MTNA_LEPBL (Methylthioribose-1-phosphate isomerase OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=mtnA PE=3 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.425e-18 Identity = 66/189 (34.92%), Postives = 96/189 (50.79%), Query Frame = 3 Query: 129 IDSNSLQSICYRRGSLQLLDQRKLPLETIYLEIRDSADGWSAIREMVVRGXXXXXXXXXXXXXVEVFNLNAFSGTAADAASFLGDKLEYLVSSRPTAVNLSDAAAKLKEIISKAAATASEANSVFQAYIEAAEIMLKDDVATNKAIGSYGASFLQNQLKNSKFSVLTHCNTGSLATAGYGTALGVIRAL 695 + + L+ I + L LLDQR LP T YL+ + D AIREMVVRG + + L++ S L KL+ L+ SRPTAVNL + +A +++ + ++ E A ML++D+ N + S S +++THCNTG+LATAG+GTALGVIR+L Sbjct: 1 MQESGLKPILWTNKELILLDQRVLPGTTSYLKAKTLEDCIFAIREMVVRGAPAIAITGAFGIALYLNGLSS-----QPTFSQLKTKLDELLESRPTAVNLRLVIEEFFSRFPEADYSSANLEKMQKSAEEFALFMLEEDLENNLTLSKNALSLFPKS--PSSLNIITHCNTGALATAGHGTALGVIRSL 182 The following BLAST results are available for this feature:
BLAST of CN188332 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 172
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188332 ID=CN188332; Name=CN188332; organism=Citrus sinensis; type=EST; length=700bpback to top |