CN188331
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: MTNA_RHOCS (Methylthioribose-1-phosphate isomerase OS=Rhodospirillum centenum (strain ATCC 51521 / SW) GN=mtnA PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.566e-16 Identity = 53/119 (44.54%), Postives = 67/119 (56.30%), Query Frame = -1 Query: 438 LMKDGRVSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSG-QEIVIEERSAKELLCSRGGLGE------QVAASGISVWNPAFDVTPANLITGIITEKGV 773 LM+ G V +VG DRV A GD ANKIGTY AL A + F+VA P ++ID L G I IE R +E+ G + ++ A G V N FDVTPA L+TG ITE+G+ Sbjct: 229 LMQHGLVDLAVVGTDRVTARGDVANKIGTYLKALAAHDTGVPFWVALPGSTIDWLLEDGVHGIPIETRGDEEVTEITGRTADGRIERVRIVADGSPVANYGFDVTPARLVTGFITERGL 347
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: EI2B2_ARCFU (Putative translation initiation factor eIF-2B subunit 2 OS=Archaeoglobus fulgidus GN=AF_2037 PE=3 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.556e-14 Identity = 47/107 (43.93%), Postives = 60/107 (56.07%), Query Frame = -1 Query: 435 VSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVV 755 V V+VGAD + ANG NKIGT +AL AK + F VAA G+ +VIEER A+E+ E++ G+ V NPAFDVTP + I IITE G + Sbjct: 182 VDCVVVGADTITANGALINKIGTSQIALAAKEARVPFMVAAETYKFSPKTLFGELVVIEERDAREV------APEEILKLGVKVRNPAFDVTPRDYIDVIITEIGAI 282
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: EI2B2_PYRAB (Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus abyssi GN=aIF-2BII PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.820e-13 Identity = 45/111 (40.54%), Postives = 57/111 (51.35%), Query Frame = -1 Query: 414 VIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADD 746 V++GAD + ANG NKIGT +AL AK H + +AA GQ + IE R E++ + I VWNPAFDVTP I IITEKG++ A D Sbjct: 199 VVMGADSITANGAVINKIGTSLIALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMRDPTEVIPEE---ELKTWPKNIEVWNPAFDVTPPEYIDVIITEKGIIPPYAAID 306
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: EI2B2_PYRHO (Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus horikoshii GN=PH0208 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 8.222e-13 Identity = 44/111 (39.64%), Postives = 57/111 (51.35%), Query Frame = -1 Query: 414 VIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADD 746 V++GAD + ANG NKIGT +AL AK H + +AA GQ + IE R E++ + I VWNPAFDVTP I IITE+G++ A D Sbjct: 199 VVMGADSITANGAVINKIGTSLIALTAKEHRVWVMIAAETYKFHPATMLGQLVEIEMRDPTEVIPEE---ELRTWPKNIEVWNPAFDVTPPEYIDVIITERGIIPPYAAID 306
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: EI2B2_METJA (Putative translation initiation factor eIF-2B subunit 2 OS=Methanocaldococcus jannaschii GN=MJ0122 PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 1.074e-12 Identity = 46/112 (41.07%), Postives = 58/112 (51.79%), Query Frame = -1 Query: 420 VSAVIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGA 755 + V+VGAD + ANG NKIGT +AL A + F AA G+ I IEERS +E+ + GI + NPAFDVTPA I IITE G++ GA Sbjct: 190 IDIVVVGADAITANGCLVNKIGTSQIALIANESRVPFLTAAETYKFHPKTIVGELIEIEERSPEEVAVF------EDKYKGIKIRNPAFDVTPAKYIDAIITEVGLIPPQGA 295
BLAST of CN188331 vs. ExPASy Swiss-Prot
Match: EI2B2_PYRFU (Putative translation initiation factor eIF-2B subunit 2 OS=Pyrococcus furiosus GN=PF0122 PE=3 SV=2) HSP 1 Score: 68.9366 bits (167), Expect = 3.454e-11 Identity = 44/111 (39.64%), Postives = 56/111 (50.45%), Query Frame = -1 Query: 414 VIVGADRVAANGDTANKIGTYSLALCAKFHNILFYVAAPLTSIDLTLSSGQEIVIEERSAKELLCSRGGLGEQVAASGISVWNPAFDVTPANLITGIITEKGVVTKAGADD 746 V++GAD + ANG N+IGT +AL AK H + +AA GQ + IE R E++ + I V NPAFDVTP I IITEKGV+ A D Sbjct: 199 VVMGADSITANGAVINQIGTALIALTAKEHRVWVMIAAETYKFHPETMLGQLVEIEMRDPTEVVPKE---ELETWPKNIEVLNPAFDVTPPEYIDVIITEKGVIPPYAAID 306 The following BLAST results are available for this feature:
BLAST of CN188331 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 216
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188331 ID=CN188331; Name=CN188331; organism=Citrus sinensis; type=EST; length=779bpback to top |