CN188329

Overview
NameCN188329
Unique NameCN188329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF_DICDI (Fructose-bisphosphate aldolase OS=Dictyostelium discoideum GN=fba PE=3 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.753e-30
Identity = 70/122 (57.38%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K T E I + TVR LQRT+P A+  VVFLSGGQ+E EAT NLNAMN L  + PW+LSFS+GRALQ S +  W G+  NV+ A+  +L R K NS A LG Y G+   G  A+ESL+VKDYKY
Sbjct:  238 KATSEQIGKFTVRTLQRTVPPALTGVVFLSGGQTEIEATANLNAMNVLPNR-PWALSFSYGRALQASVISTWKGESANVEAARKVYLHRAKCNSLAQLGKYTGEESTG-SASESLYVKDYKY 357          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF_ECHMU (Fructose-bisphosphate aldolase OS=Echinococcus multilocularis GN=FBPA PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30
Identity = 70/122 (57.38%), Postives = 86/122 (70.49%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K + E  A  TV ALQRT+P AVP VVFLSGGQSE +ATRNLNA+N+   KKPW+LSFSFGRALQ S + AW GK ENV+  QA FL   KAN  A+LG ++G+ +   G  +SL V ++ Y
Sbjct:  243 KYSVEDNARATVEALQRTVPVAVPGVVFLSGGQSELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKANGAASLGKFEGELKTAAG-QKSLFVANHAY 363          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOA_RAT (Fructose-bisphosphate aldolase A OS=Rattus norvegicus GN=Aldoa PE=1 SV=2)

HSP 1 Score: 130.183 bits (326), Expect = 1.092e-29
Identity = 67/122 (54.92%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K + E IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  243 KFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALANSLACQGKYTPSGQSGAAASESLFISNHAY 364          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOC_PANTR (Fructose-bisphosphate aldolase C OS=Pan troglodytes GN=ALDOC PE=2 SV=3)

HSP 1 Score: 128.642 bits (322), Expect = 3.177e-29
Identity = 63/122 (51.64%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N + A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAEAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOB_BOVIN (Fructose-bisphosphate aldolase B OS=Bos taurus GN=ALDOB PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 4.149e-29
Identity = 66/122 (54.10%), Postives = 77/122 (63.11%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K TPE +A  TV AL RT+PAAVP + FLSGG SEE+AT NLNA+N     KPW LSFS+GRALQ S L AW GK EN +  Q AF+ R  ANS+A  G Y      G  + +SL    Y Y
Sbjct:  243 KYTPEQVAMATVTALHRTVPAAVPGICFLSGGMSEEDATLNLNAINLCPLPKPWKLSFSYGRALQASALAAWGGKAENKKTTQEAFMKRALANSQAAKGQYVHMGSSGSASTQSLFTASYTY 364          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 65/122 (53.28%), Postives = 85/122 (69.67%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            + TPE ++++T++ L R +P AVP ++FLSGGQSE EAT+NLNAMNQ     PW +SFS+ RALQ + LK W G+ ENV+ AQ A L+R KANS A LG Y  D +  E A E + VK+Y Y
Sbjct:  270 RATPEQVSDYTLKLLHRRIPPAVPGIMFLSGGQSEVEATQNLNAMNQ--GPNPWHVSFSYARALQNTCLKTWGGQPENVKAAQDALLLRAKANSLAQLGKYTSDGEAAE-AKEGMFVKNYVY 388          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOC_MACFA (Fructose-bisphosphate aldolase C OS=Macaca fascicularis GN=ALDOC PE=2 SV=3)

HSP 1 Score: 127.487 bits (319), Expect = 7.077e-29
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.243e-29
Identity = 66/122 (54.10%), Postives = 82/122 (67.21%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            + TPE +A +T++ L+  +P AVP ++FLSGGQSE EAT NLNAMNQ     PW +SFS+ RALQ + LK W GKEENV+ AQ   L R KANS A LG Y G+ +  E A E + VK Y Y
Sbjct:  281 RATPEQVASYTLKLLRNRIPPAVPGIMFLSGGQSELEATLNLNAMNQ--APNPWHVSFSYARALQNTCLKTWGGKEENVKAAQDILLARAKANSLAQLGKYTGEGE-SEEAKEGMFVKGYTY 399          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOC_HUMAN (Fructose-bisphosphate aldolase C OS=Homo sapiens GN=ALDOC PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.243e-29
Identity = 63/122 (51.64%), Postives = 83/122 (68.03%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K TPE IA  TV AL+RT+P AVP V FLSGGQSEEEA+ NLNA+N+    +PW+L+FS+GRALQ S L AW G+ +N   A   F+ R + N  A  G Y+G  + G  AA+SL++ ++ Y
Sbjct:  243 KYTPEEIAMATVTALRRTVPPAVPGVTFLSGGQSEEEASFNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEVNGLAAQGKYEGSGEDGGAAAQSLYIANHAY 364          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALDOA_RABIT (Fructose-bisphosphate aldolase A OS=Oryctolagus cuniculus GN=ALDOA PE=1 SV=2)

HSP 1 Score: 127.102 bits (318), Expect = 9.243e-29
Identity = 66/122 (54.10%), Postives = 84/122 (68.85%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K + E IA  TV AL+RT+P AV  V FLSGGQSEEEA+ NLNA+N+    KPW+L+FS+GRALQ S LKAW GK+EN++ AQ  ++ R  ANS A  G Y    Q G  A+ESL + ++ Y
Sbjct:  243 KYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQSEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALANSLACQGKYTPSGQAGAAASESLFISNHAY 364          
The following BLAST results are available for this feature:
BLAST of CN188329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_DICDI3.753e-3057.38Fructose-bisphosphate aldolase OS=Dictyostelium di... [more]
ALF_ECHMU4.901e-3057.38Fructose-bisphosphate aldolase OS=Echinococcus mul... [more]
ALDOA_RAT1.092e-2954.92Fructose-bisphosphate aldolase A OS=Rattus norvegi... [more]
ALDOC_PANTR3.177e-2951.64Fructose-bisphosphate aldolase C OS=Pan troglodyte... [more]
ALDOB_BOVIN4.149e-2954.10Fructose-bisphosphate aldolase B OS=Bos taurus GN=... [more]
ALFC_ORYSJ7.077e-2953.28Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALDOC_MACFA7.077e-2951.64Fructose-bisphosphate aldolase C OS=Macaca fascicu... [more]
ALFC1_ARATH9.243e-2954.10Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALDOC_HUMAN9.243e-2951.64Fructose-bisphosphate aldolase C OS=Homo sapiens G... [more]
ALDOA_RABIT9.243e-2954.10Fructose-bisphosphate aldolase A OS=Oryctolagus cu... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS05_0005N18_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188329 ID=CN188329; Name=CN188329; organism=Citrus sinensis; type=EST; length=716bp
AGTCTGAAGCTCCCAAAGTTACACCGGAGGTGATTGCTGAACACACTGTC
CGGGCCCTGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCTT
GTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCGCAACCTTAATGCCATGA
ACCAGCTCAAGACGAAGAAGCCATGGTCACTTTCCTTTTCCTTTGGACGT
GCACTTCAGCAGAGCACTCTCAAGGCATGGGCTGGAAAGGAAGAGAATGT
GCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTGCAAGGCCAACTCTGAGG
CTACCCTCGGTACTTACAAGGGCGATGCCCAGCTTGGTGAAGGTGCCGCA
GAGTCTCTCCATGTCAAGGACTACAAATACTAAGCACAGTTGAAGCTTTG
GGTGTTGTGCTTTATGAACTTTATGAGAGTAAATGGCGGTATGAACATTA
GGTTGGCACATTCTCATTCATAGTTTTAGGGCTTTTTCATATTAGGTGGA
GCAATAAAAAGCTTGGGAACTTCGGTTTGAGTGGTTTTGATCAAAACTAA
ACTGAAAACTGTTTATGCTTTTGTTTTTGTTTTTTTTTTCCTTTTCCCCT
AATGGCGCTAAATTTCTGTGATTTTGTCACATAATTGATAATGTTTTCTT
GTGCTTATTGCTTTCTTGCATGGATCCCAATGTAATGGAAGCGAAGGTGG
TTGTGAGCTCTTGTGG
back to top