CN188329

Overview
NameCN188329
Unique NameCN188329
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF_TRYBB (Fructose-bisphosphate aldolase, glycosomal OS=Trypanosoma brucei brucei GN=ALD PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21
Identity = 50/97 (51.55%), Postives = 63/97 (64.95%), Query Frame = 3
Query:   27 EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTY 317
            E +AE+TV+ L R +P A+P V FLSGG SE  A+  LNAMN     +PW L+FS+ RALQ S +K W GKE  V+  + AF+ R K NS A LG Y
Sbjct:  257 EQVAEYTVKTLARVIPPALPGVTFLSGGLSEVMASEYLNAMNNCPLPRPWKLTFSYARALQSSAIKRWGGKESGVEAGRRAFMHRAKMNSLAQLGKY 353          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF1_XANAC (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas axonopodis pv. citri GN=XAC3344 PE=3 SV=1)

HSP 1 Score: 95.5153 bits (236), Expect = 2.980e-19
Identity = 51/100 (51.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:   27 EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 323
            E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK WA     N  KAQ     R K N  A LG +KG
Sbjct:  236 EEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWAKDMTGNFAKAQQVIYERAKENGLAALGKWKG 334          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFA (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa GN=XF_0826 PE=3 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 3.892e-19
Identity = 50/98 (51.02%), Postives = 66/98 (67.35%), Query Frame = 3
Query:   33 IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 323
            +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQL    PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  238 VAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQL-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF1_XANCP (Probable fructose-bisphosphate aldolase class 1 OS=Xanthomonas campestris pv. campestris GN=XCC3185 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 8.671e-19
Identity = 50/100 (50.00%), Postives = 66/100 (66.00%), Query Frame = 3
Query:   27 EVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 323
            E +AE TV  L+ T+PA +P +VFLSGGQ++E++T +LN M+QL    PW LSFS+GRA+QQ+ LK W+     N  KAQ     R K N  A LG +KG
Sbjct:  236 EEVAESTVMCLKSTVPAILPGIVFLSGGQTDEQSTAHLNEMHQL-GNLPWPLSFSYGRAMQQAALKLWSKDMTGNYAKAQQIIYERAKENGLAALGKWKG 334          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF1_XYLFT (Probable fructose-bisphosphate aldolase class 1 OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=PD_1845 PE=3 SV=1)

HSP 1 Score: 93.5893 bits (231), Expect = 1.132e-18
Identity = 49/98 (50.00%), Postives = 65/98 (66.33%), Query Frame = 3
Query:   33 IAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWA-GKEENVQKAQAAFLVRCKANSEATLGTYKG 323
            +AE TV  L+ T+PA +P +VFLSGGQ++ ++T +LNAMNQ     PW LSFS+GRA+QQ+ LK W+   + N  KAQ     R K N  A LG +KG
Sbjct:  238 VAESTVMCLKSTVPAILPGIVFLSGGQTDAQSTAHLNAMNQF-DPLPWPLSFSYGRAMQQAALKLWSQDMKGNFAKAQQVVYERAKENGLAALGKWKG 334          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 90.5077 bits (223), Expect = 9.587e-18
Identity = 51/111 (45.95%), Postives = 67/111 (60.36%), Query Frame = 3
Query:    9 APKVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGE 341
            A K  PE +A++ ++ L R     VP ++ LSGGQSE EAT NLNAMNQ  +  PW +SFS+ RALQ + LK W   +ENV+    A     K+NS A LG Y G+ +  E
Sbjct:  276 ARKGPPEQVADYPLKLLHRRRGPVVPGIMVLSGGQSEVEATLNLNAMNQ--SPNPWHVSFSYARALQNTCLKTWVEGQENVKAQDFAC---AKSNSLAQLGKYTGEGESEE 381          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.643e-17
Identity = 53/122 (43.44%), Postives = 71/122 (58.20%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFLVRCKANSEATLGTYKGDAQLGEGAAESLHVKDYKY 380
            K  P  +AE+T++ L    P  VP ++FLSGGQSE E+T NLNAMNQ  +  PW +SFS+ RAL  + LK W      VQ  + A   R KANS+A  G Y    + G+ AA+ ++ K   Y
Sbjct:  256 KAGPAKVAEYTLKMLAARAPP-VPGIMFLSGGQSELESTLNLNAMNQ--SPNPWHVSFSYARALTNTVLKTWQASPRTVQAPRLAAQAR-KANSDAQQGKYDATTE-GKEAAQGMYEKGKGY 372          
BLAST of CN188329 vs. ExPASy Swiss-Prot
Match: ALF_ENCCU (Fructose-bisphosphate aldolase OS=Encephalitozoon cuniculi GN=ECU01_0240 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 4.028e-16
Identity = 40/87 (45.98%), Postives = 55/87 (63.22%), Query Frame = 3
Query:   15 KVTPEVIAEHTVRALQRTMPAAVPAVVFLSGGQSEEEATRNLNAMNQLKTKKPWSLSFSFGRALQQSTLKAWAGKEENVQKAQAAFL 275
            K TP+ +A  T+RAL  T+P  +P +VFLSGG   E+A   LNA+N  +  + WSLSFSF RAL    L+ W G + N+++AQ   L
Sbjct:  234 KYTPKKVATFTLRALLSTIPCGIPGIVFLSGGHGSEDAIGFLNAINMERGCRTWSLSFSFARALTDGVLETWRGDDSNIEEAQKILL 320          
The following BLAST results are available for this feature:
BLAST of CN188329 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 58
Match NameE-valueIdentityDescription
ALF_TRYBB2.438e-2151.55Fructose-bisphosphate aldolase, glycosomal OS=Tryp... [more]
ALF1_XANAC2.980e-1951.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFA3.892e-1951.02Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XANCP8.671e-1950.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALF1_XYLFT1.132e-1850.00Probable fructose-bisphosphate aldolase class 1 OS... [more]
ALFC_SPIOL9.587e-1845.95Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC_CHLRE3.643e-1743.44Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ENCCU4.028e-1645.98Fructose-bisphosphate aldolase OS=Encephalitozoon ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N18_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188329 ID=CN188329; Name=CN188329; organism=Citrus sinensis; type=EST; length=716bp
AGTCTGAAGCTCCCAAAGTTACACCGGAGGTGATTGCTGAACACACTGTC
CGGGCCCTGCAACGCACTATGCCTGCAGCAGTTCCTGCTGTTGTGTTCTT
GTCTGGTGGGCAGAGTGAGGAGGAGGCTACCCGCAACCTTAATGCCATGA
ACCAGCTCAAGACGAAGAAGCCATGGTCACTTTCCTTTTCCTTTGGACGT
GCACTTCAGCAGAGCACTCTCAAGGCATGGGCTGGAAAGGAAGAGAATGT
GCAGAAGGCCCAGGCTGCTTTCCTTGTCAGGTGCAAGGCCAACTCTGAGG
CTACCCTCGGTACTTACAAGGGCGATGCCCAGCTTGGTGAAGGTGCCGCA
GAGTCTCTCCATGTCAAGGACTACAAATACTAAGCACAGTTGAAGCTTTG
GGTGTTGTGCTTTATGAACTTTATGAGAGTAAATGGCGGTATGAACATTA
GGTTGGCACATTCTCATTCATAGTTTTAGGGCTTTTTCATATTAGGTGGA
GCAATAAAAAGCTTGGGAACTTCGGTTTGAGTGGTTTTGATCAAAACTAA
ACTGAAAACTGTTTATGCTTTTGTTTTTGTTTTTTTTTTCCTTTTCCCCT
AATGGCGCTAAATTTCTGTGATTTTGTCACATAATTGATAATGTTTTCTT
GTGCTTATTGCTTTCTTGCATGGATCCCAATGTAATGGAAGCGAAGGTGG
TTGTGAGCTCTTGTGG
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