CN188328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_YEAST (Thiazole biosynthetic enzyme, mitochondrial OS=Saccharomyces cerevisiae GN=THI4 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.859e-18 Identity = 55/118 (46.61%), Postives = 67/118 (56.78%), Query Frame = -3 Query: 274 CMDPNVMEAK---------------VVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAE-DAIVRLPREV-VPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALK 576 CMDPNV+E V++S+ GHDGPFGA KR+ I +++ GMK LDMN AE D ++ V M GMEVAE+DG RMGPTFGAM +SG AA LK Sbjct: 205 CMDPNVIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCAKRIVDIDQNQKLGGMKGLDMNHAEHDVVIHSGAYAGVDNMYFAGMEVAELDGLNRMGPTFGAMALSGVHAAEQILK 322
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_PYRHO (Putative thiazole biosynthetic enzyme OS=Pyrococcus horikoshii GN=PH1357 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 7.757e-16 Identity = 47/102 (46.08%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP +EAK V+ S GH VKR G+++E+PG A+ E V+ REV PG+ VTGM I GAPRMGP FG M +SG+KAA LK L Sbjct: 153 VDPLTIEAKYVIDSTGHGAQVAQFLVKR----GLLKEIPGEGAMWAEQGEKLTVKNTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGRKAAQEILKKL 250
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_AERPE (Putative thiazole biosynthetic enzyme OS=Aeropyrum pernix GN=APE_2149.1 PE=3 SV=2) HSP 1 Score: 83.5741 bits (205), Expect = 1.323e-15 Identity = 45/106 (42.45%), Postives = 67/106 (63.21%), Query Frame = -3 Query: 265 LSCMDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 582 ++C+DP + A+ VV + GHD A ++L GM+E + + + +ED +V EV PG++V G+ VAE+ G PRMGPTFGAM++SG+KAA L + LG Sbjct: 157 ITCVDPVGLRAEYVVDATGHD----AVVTRKLAERGMVE-ASKLGPMWVERSEDLVVEKTGEVYPGLVVAGIAVAEVYGLPRMGPTFGAMLLSGEKAAALIGEKLG 257
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_PYRFU (Putative thiazole biosynthetic enzyme OS=Pyrococcus furiosus GN=PF1530 PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.257e-15 Identity = 46/103 (44.66%), Postives = 60/103 (58.25%), Query Frame = -3 Query: 265 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLG 573 +DP +EAK V+ S GH GA + L G+IE++PG A+ E V +EV PG+ VTGM + GAPRMGP FG M +SG+KAA L+ LG Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVTQFLLKRGLIEKIPGEGAMWAEMGEKLTVENTKEVFPGLYVTGMAANAVSGAPRMGPIFGGMFLSGRKAAMEILQKLG 251
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_PYRAB (Putative thiazole biosynthetic enzyme OS=Pyrococcus abyssi GN=PYRAB07910 PE=3 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 5.028e-15 Identity = 47/102 (46.08%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP +EAK V+ S GH GA + L G+IE +PG A+ E V REV PG+ VTGM I GAPRMGP FG M +SG+KAA L+ L Sbjct: 153 VDPLTVEAKYVIDSTGH----GAQVAQFLLKRGLIERIPGEGAMWAEQGERLTVENTREVFPGLYVTGMAANAIAGAPRMGPIFGGMFLSGKKAAQEILEKL 250
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_PYRKO (Putative thiazole biosynthetic enzyme OS=Pyrococcus kodakaraensis GN=TK0434 PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.911e-14 Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = -3 Query: 262 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 573 +DP +EAK VV S GH GA + L G+I+ +PG + E+ V REV PG+ TGM + GAPRMGP FG M++SG+KAA L+ LG+ Sbjct: 152 VDPLTVEAKFVVDSTGH----GAQISQHLLKRGLIKAIPGEGPMWAEKGEELTVEHTREVFPGLYATGMAANALAGAPRMGPIFGGMLLSGRKAALEILQKLGK 251
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_PYRAR (Putative thiazole biosynthetic enzyme OS=Pyrobaculum arsenaticum (strain DSM 13514 / JCM 11321) GN=Pars_1498 PE=3 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 3.259e-14 Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = -3 Query: 262 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 573 +DP AK V+ + GHD + +++ +G+ ++PG K+ +E +V +V PG+ VTGM VA + G PRMGP FG MM+SG+K A + K L + Sbjct: 153 VDPLYTMAKAVIDATGHDAEVISVAARKVPELGI--QLPGEKSAWSEVSEKLVVEYTGKVAPGLYVTGMAVAAVHGLPRMGPIFGGMMLSGKKIAEIVAKDLAE 254
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_HALWD (Putative thiazole biosynthetic enzyme OS=Haloquadratum walsbyi (strain DSM 16790) GN=HQ1276A PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 4.257e-14 Identity = 46/130 (35.38%), Postives = 70/130 (53.85%), Query Frame = -3 Query: 262 LSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSLGQ 582 L+C+DP +E+ +VV S GHD G A G++ + GM + PG ++ ++ +ED +V V PG++ TGM VA ++G PRMGPTFGAM++SG++ A L LG+ Sbjct: 163 LTCVDPVAVESDLVVDSTGHDAVVISKLSERGVLNAPGIEHANEHNTGMDNTADDEYGAPGHDSPGHDSMWVSRSEDQVVEHTGVVHPGVVATGMAVATVEGLPRMGPTFGAMLLSGKRGAQACLNELGR 292
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_METS5 (Putative thiazole biosynthetic enzyme OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=Msed_2221 PE=3 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 9.483e-14 Identity = 40/102 (39.22%), Postives = 58/102 (56.86%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP + AK VV + GHD + +++ +G++ +PG K+ AE V EV PG+ GM V EI PRMGP FGAM++SG+K A +K+L Sbjct: 159 VDPLFISAKAVVDATGHDAEVISVASRKIPELGIV--IPGEKSAYSEIAEQLTVEQSGEVAPGLYAAGMAVTEIKAIPRMGPIFGAMLLSGKKVAEDIIKNL 258
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_SULTO (Putative thiazole biosynthetic enzyme OS=Sulfolobus tokodaii GN=ST0361 PE=3 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.238e-13 Identity = 37/102 (36.27%), Postives = 59/102 (57.84%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP + AK VV + GHD + +++ + ++ +PG K+ +AE+ V V PG+ GM V E+ G PRMGP FGAM++SG++ A + +K L Sbjct: 164 VDPLFISAKAVVDATGHDAEVISVAARKIPELNIV--IPGEKSAYSETAEELTVENTGMVAPGLYAAGMAVTEVKGLPRMGPIFGAMVLSGKRVAEIIIKDL 263 The following BLAST results are available for this feature:
BLAST of CN188328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188328 ID=CN188328; Name=CN188328; organism=Citrus sinensis; type=EST; length=764bpback to top |