CN188328
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_META3 (Putative thiazole biosynthetic enzyme OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=Maeo_0798 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 7.513e-11 Identity = 34/102 (33.33%), Postives = 57/102 (55.88%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKSIGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP + AK V+ + GHD T ++ + +G++ +PG K+L + E+ +++ +E+ PG+ V GM G RMG FG M ISG+ A + L+ L Sbjct: 161 IDPLTINAKYVIDATGHDASVACTLARKNEDLGLV--IPGEKSLWADEGENGLLKYTKELFPGLFVCGMASNATHGGYRMGAVFGGMYISGKIVADMILEKL 260
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_METBF (Putative thiazole biosynthetic enzyme OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=Mbar_A2100 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 37/104 (35.58%), Postives = 61/104 (58.65%), Query Frame = -3 Query: 268 MDPNVMEAKVVVSSCGHDGPFGATGVKRLKS--IGMIEEVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 573 +DP ++ K+V+ GH+ T ++++ + IG + ++ G K + E +V +E+ PG+IV GM +PRMGP FG M++SG+KAA LAL+ L Sbjct: 155 VDPLMIRTKLVIDGTGHEAVVCNTILRKIPNAKIGNLGKL-GEKPMWSEVGEQLVVDATKEIYPGLIVAGMAANAATCSPRMGPVFGGMLLSGEKAAKLALEKL 257
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_HALSA (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarium GN=VNG_2604G PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 268 LSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 582 L+C+DP +EA VVV + GHD G A G++ ++ + GM + + PG ++ + +ED +V +V G++ G+ A + G RMGPTFGAM++SG+ AA+ + L Sbjct: 163 LTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290
BLAST of CN188328 vs. ExPASy Swiss-Prot
Match: THI4_HALS3 (Putative thiazole biosynthetic enzyme OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=OE4651F PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.813e-11 Identity = 41/128 (32.03%), Postives = 67/128 (52.34%), Query Frame = -3 Query: 268 LSCMDPNVMEAKVVVSSCGHD----------GPFGATGVKRLK--SIGMIE-----------EVPGMKALDMNSAEDAIVRLPREVVPGMIVTGMEVAEIDGAPRMGPTFGAMMISGQKAAHLALKSL 582 L+C+DP +EA VVV + GHD G A G++ ++ + GM + + PG ++ + +ED +V +V G++ G+ A + G RMGPTFGAM++SG+ AA+ + L Sbjct: 163 LTCVDPIALEADVVVDATGHDAVVVSKLHERGVLEADGIEHVEEHATGMDQSGDGEYGAPGHDSPGHDSMWVADSEDKVVEQTGKVHDGLVTAGLSTATVHGLTRMGPTFGAMLLSGKVAANAVMDEL 290 The following BLAST results are available for this feature:
BLAST of CN188328 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 44
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188328 ID=CN188328; Name=CN188328; organism=Citrus sinensis; type=EST; length=764bpback to top |