CN188305
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_STYLE (Tubulin beta chain OS=Stylonychia lemnae GN=TUBB1 PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.218e-75 Identity = 132/145 (91.03%), Postives = 143/145 (98.62%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMMCA+DPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPPKGLKMA TF+GNST+IQEMF+RV EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA+D Sbjct: 288 ELTQQMFDAKNMMCASDPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFLGNSTAIQEMFKRVGEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAED 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB1_PARTE (Tubulin beta chain OS=Paramecium tetraurelia GN=bPT2 PE=3 SV=1) HSP 1 Score: 281.952 bits (720), Expect = 2.218e-75 Identity = 131/145 (90.34%), Postives = 144/145 (99.31%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMMCAADPRHGRYLTASA+FRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSS+CDIPPKGLKMA TF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 288 ELTQQMFDAKNMMCAADPRHGRYLTASALFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSICDIPPKGLKMAVTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_TOXGO (Tubulin beta chain OS=Toxoplasma gondii PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.454e-75 Identity = 131/145 (90.34%), Postives = 144/145 (99.31%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMMCA+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPPKGLKM+ TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 288 ELTQQMFDAKNMMCASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNMKSSVCDIPPKGLKMSVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_NAEGR (Tubulin beta chain OS=Naegleria gruberi PE=2 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.454e-75 Identity = 132/145 (91.03%), Postives = 144/145 (99.31%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPP+GLKMA+TFIGNST+IQEMF+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 288 ELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPRGLKMAATFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB1_SOYBN (Tubulin beta-1 chain OS=Glycine max GN=TUBB1 PE=3 SV=1) HSP 1 Score: 280.411 bits (716), Expect = 6.454e-75 Identity = 133/145 (91.72%), Postives = 139/145 (95.86%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQMWDA+NMMCAADPRHGRYLTASAMFRGKMSTKEVD+QMINVQNKNSSYFVEWIPNNVKSSVCDIPP GL M+STF+GNSTSIQEMFRRVSEQFT MF+RKAFLHWYTGEGMDEMEFTE +NMNDLVAEYQQYQDATA D Sbjct: 288 ELTQQMWDARNMMCAADPRHGRYLTASAMFRGKMSTKEVDQQMINVQNKNSSYFVEWIPNNVKSSVCDIPPTGLSMSSTFMGNSTSIQEMFRRVSEQFTVMFKRKAFLHWYTGEGMDEMEFTEVRANMNDLVAEYQQYQDATAVD 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB1_PHYPO (Tubulin beta-1 chain OS=Physarum polycephalum GN=BETA PE=1 SV=4) HSP 1 Score: 280.411 bits (716), Expect = 6.454e-75 Identity = 133/145 (91.72%), Postives = 142/145 (97.93%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPPKGLKMA TFIGNST+IQE+F+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDAT DD Sbjct: 288 ELTQQMFDAKNMMAASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMAVTFIGNSTAIQELFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATIDD 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_EUPOC (Tubulin beta chain OS=Euplotes octocarinatus PE=3 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.101e-74 Identity = 131/145 (90.34%), Postives = 144/145 (99.31%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMM A+DPRHGRYLTASAMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+KSSVCDIPPKGLKM+STF+GNST+IQEMF+RV+EQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 288 ELTQQMFDAKNMMSASDPRHGRYLTASAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKSSVCDIPPKGLKMSSTFVGNSTAIQEMFKRVAEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB2_ANEPH (Tubulin beta-2 chain (Fragment) OS=Anemia phyllitidis GN=TUBB2 PE=2 SV=1) HSP 1 Score: 279.641 bits (714), Expect = 1.101e-74 Identity = 136/144 (94.44%), Postives = 139/144 (96.53%), Query Frame = -3 Query: 275 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATAD 706 ELTQQM DAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPP GLKMA TFIGNSTSIQEMFRRV +QFTAMFR KAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA+ Sbjct: 256 ELTQQMRDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPVGLKMACTFIGNSTSIQEMFRRVRDQFTAMFRXKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAE 399
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_ACHKL (Tubulin beta chain OS=Achlya klebsiana PE=2 SV=1) HSP 1 Score: 279.256 bits (713), Expect = 1.438e-74 Identity = 130/145 (89.66%), Postives = 143/145 (98.62%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQ +DAKNMMCAADPRHGRYLTA+ MFRG+MSTKEVDEQM+NVQNKNSSYFVEWIPNN+K+SVCDIPPKGLKM++TFIGNST+IQEMF+RVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 286 ELTQQQFDAKNMMCAADPRHGRYLTAACMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPNNIKASVCDIPPKGLKMSTTFIGNSTAIQEMFKRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 430
BLAST of CN188305 vs. ExPASy Swiss-Prot
Match: TBB_PLAFK (Tubulin beta chain OS=Plasmodium falciparum (isolate K1 / Thailand) PE=3 SV=2) HSP 1 Score: 277.33 bits (708), Expect = 5.464e-74 Identity = 130/145 (89.66%), Postives = 142/145 (97.93%), Query Frame = -3 Query: 272 ELTQQMWDAKNMMCAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKNSSYFVEWIPNNVKSSVCDIPPKGLKMASTFIGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVAEYQQYQDATADD 706 ELTQQM+DAKNMMCA+DPRHGRYLTA AMFRG+MSTKEVDEQM+NVQNKNSSYFVEWIP+N KSSVCDIPPKGLKMA TF+GNST+IQEMF+RVS+QFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLV+EYQQYQDATA++ Sbjct: 288 ELTQQMFDAKNMMCASDPRHGRYLTACAMFRGRMSTKEVDEQMLNVQNKNSSYFVEWIPHNTKSSVCDIPPKGLKMAVTFVGNSTAIQEMFKRVSDQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVSEYQQYQDATAEE 432 The following BLAST results are available for this feature:
BLAST of CN188305 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 378
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188305 ID=CN188305; Name=CN188305; organism=Citrus sinensis; type=EST; length=708bpback to top |