CN188303

Overview
NameCN188303
Unique NameCN188303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_HAEIN (Glutathione reductase OS=Haemophilus influenzae GN=gor PE=3 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19
Identity = 74/224 (33.04%), Postives = 115/224 (51.34%), Query Frame = 2
Query:    8 GALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIP-GPMLAHKAEEDGVACVEFLAGKH--GHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELGVE-YRVGKFPFLA 664
            G  AL E+PK+  VIGAGYI +E+  V   LG E  ++      + + D  I +     L +  ++    +    +  + DG  LT+      + T+   D V+ +AGR P T  +GL+  GVET++ G + V++   TN+ G+YA+GD+I  G  L   A   G    E L       ++DY  VP VV++HP + +VG TE Q +++ G E  +V K  F A
Sbjct:  164 GFFALTELPKRAAVIGAGYIAVELSGVLNSLGVETHLLVRRHAPMRNQDPLIVETLVEVLAQDGIQLHTNSTPSEIVKNADG-SLTVRCDGQSDVTV---DCVIWAAGRVPTTDKIGLENAGVETNEHGYVKVDKYQNTNVKGIYAVGDIIENGIELTPVAVAAGRRLSERLFNNKPTEYLDYSLVPTVVFSHPPIGTVGLTEPQAIEQYGAENVKVYKSSFTA 383          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHRP_TOBAC (Glutathione reductase, chloroplastic (Fragment) OS=Nicotiana tabacum GN=GOR PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.478e-19
Identity = 67/208 (32.21%), Postives = 101/208 (48.56%), Query Frame = 2
Query:   11 ALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKA-EEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ-VKELG 628
            AL L   P K+ ++G GYI LE   ++  L SEV V      ++   D EIR      +  + ++F  +     +  S DG  L+L+ + G   T+     ++ + GR P T  LGL+ +GV+  K G I V+E   T++P ++A+GDV     L   A  E G       A +    DY  VP  V++ P +  VG  EEQ +KE G
Sbjct:  245 ALDLPTKPNKIAIVGGGYIALEFAGIFNGLKSEVHVFIRQKKVLRGFDEEIRDFVGEQMSLRGIEFHTEESPQAIVKSADG-SLSLKTSRG---TVEGFSHIMFATGRRPNTKNLGLETVGVKMTKNGAIEVDEYSRTSVPSIWAVGDVTDRINLTPVALMEGGALAKTIFAHEPTKPDYRNVPAAVFSQPPIGQVGLMEEQAIKEFG 448          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: MERA_THIFE (Mercuric reductase OS=Thiobacillus ferrooxidans GN=merA PE=1 SV=2)

HSP 1 Score: 96.2857 bits (238), Expect = 1.930e-19
Identity = 70/248 (28.23%), Postives = 116/248 (46.77%), Query Frame = 2
Query:    5 TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLS-GDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            T  L    +P++L VIG+  + LE+   +ARLGS VT++     +    D  I +    +   + ++ +  T+   V  + G+ V  T      GE   L AD +LV+ GR P T  L L+  GV  +  G I +++   TN P +YA GD    P   + A   G      + G    +D   +P VV+T P+VA+VG +  +    G+E            RA A  +  G ++++AE  + +++G
Sbjct:  247 TEGLVSESIPERLAVIGSSVVALELAQAFARLGSHVTILA-RGTLFLREDPAIGEAITAAFRAEGIEVLEHTQASQVAYADGEFVLAT----GHGE---LRADKLLVATGRAPNTRRLNLEAAGVAINAQGAIVIDQGMRTNSPNIYAAGDCTDQPQFVYVAAAAGTRAAINMMGGSAALDLTAMPAVVFTDPQVATVGYSGAEAHRDGIETDSRTLTLDNVPRALANFNTRGFIKLVAEVGSGRLIG 486          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHRP_ARATH (Glutathione reductase, chloroplastic OS=Arabidopsis thaliana GN=EMB2360 PE=2 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 4.300e-19
Identity = 64/205 (31.22%), Postives = 102/205 (49.76%), Query Frame = 2
Query:   11 ALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKE 622
            AL L   PKK+ ++G GYI LE   ++  L  EV V      ++   D ++R      +  + ++F  +     +  +GDG   +L+ + G   T+     V+ + GR P T  LGL+ +GV+  K G I V+E   T++P ++A+GDV     L   A  +G A  + L   +    DY  VP  V++ P + +VG TEEQ  E
Sbjct:  253 ALDLPSKPKKIAIVGGGYIALEFAGIFNGLNCEVHVFIRQKKVLRGFDEDVRDFVGEQMSLRGIEFHTEESPEAIIKAGDG-SFSLKTSKG---TVEGFSHVMFATGRKPNTKNLGLENVGVKMAKNGAIEVDEYSQTSVPSIWAVGDVTDRINLTPVALMEGGALAKTLFQNEPTKPDYRAVPCAVFSQPPIGTVGLTEEQAIE 453          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_KLULA (Glutathione reductase OS=Kluyveromyces lactis GN=GLR1 PE=1 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19
Identity = 73/250 (29.20%), Postives = 125/250 (50.00%), Query Frame = 2
Query:   20 LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTE-EQVKELG---VEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L + PKK+VV+GAGYIG+E+  V+  LGS+  +V     ++   D  I++    +  K+ +     + V  V+      KL ++   G  K I   D ++ + GR     GLGL+ IGV+ D   +I V+E   +++  VY++GDV+    L   A   G      L G    K+   DY+ VP VV++HPE  S+G +E E +++ G   V+    KF  +  +  +  D      +++   E ++++G
Sbjct:  192 LEDQPKKVVVVGAGYIGVEIAGVFNGLGSDSHLVIRGETVLRKFDDCIQETVTDTYIKEGVNIHKSSNVTKVEKDESTGKLNIQLDTG--KNIDNVDSLIWTIGRRSL-LGLGLENIGVKLDAKEQIVVDEYQNSSVKNVYSLGDVVGKVELTPVAIAAGRKLSNRLFGPEKFKNQKQDYENVPSVVFSHPEAGSIGLSEREAIEKFGKDNVKVYNSKFNAMYYAMMEEKDKTPTRYKLVCTGEEEKVVG 438          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_CANGA (Glutathione reductase OS=Candida glabrata GN=GLR1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19
Identity = 73/252 (28.97%), Postives = 124/252 (49.21%), Query Frame = 2
Query:    8 GALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTE-EQVKELGVE-YRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            G   L E PKK+VV+GAGYIG+E+  V+  LGS+  +V     ++   D  I+        ++ +    +T V  V+      KL++    G  + + + D ++ + GR     G+GL+ +GV+ +   +I  +E   TN+P +Y++GDV     L   A   G      L G    ++  +DY  VP VV++HPE  S+G TE E +K+ G +  +V    F A   A     +    +I+ E   ++++G
Sbjct:  182 GFFRLEEQPKKVVVVGAGYIGIELAGVFHGLGSDSHLVIRGKTVLRKFDEIIQNTVTDYYVEEGINVHKETNVDKVEKDEKTGKLSVHLTNG--QVLEDVDELIWTMGRRSL-LGIGLENVGVKLNDKEQIITDEYQNTNVPNIYSLGDVSGRVELTPVAIAAGRKLSNRLFGPEQYRNDKLDYTNVPSVVFSHPEAGSIGLTEDEAIKQYGKDNIKVYTSKFTAMYYAMLEHKSPTRYKIICEGPNEKVVG 430          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_ASHGO (Glutathione reductase OS=Ashbya gossypii GN=GLR1 PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 7.335e-19
Identity = 65/209 (31.10%), Postives = 101/209 (48.33%), Query Frame = 2
Query:    8 GALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTEEQVKE 622
            G   L E PKK+V+ G+GYI  E   V+  LG+E  +V     ++   D  I++      EK+ +    K  +  V+   +  KLT+  +    K I + D ++ + GR     G+  + +GV+  + G + V+E   T+  G+YA+GDV+    L   A   G      L G    +    DYD VP VV++HPE  S+G TE Q  E
Sbjct:  187 GFFRLEEQPKKVVISGSGYIATEFAGVFNGLGTETHIVIRKDHVLTKFDPSIQEIVTEHYEKEGVNIHKKESIQRVEKDPNTGKLTVHLSG---KIIEDVDQLVWAIGRKSL-LGIAPENVGVKLGETGHVVVDEYQNTSTKGIYALGDVVGNMELTPVAIAAGRKLANRLFGPEQMRAQKQDYDNVPSVVFSHPEAGSIGLTEPQAIE 391          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TYTR_TRYCO (Trypanothione reductase OS=Trypanosoma congolense GN=TPR PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 64/206 (31.07%), Postives = 105/206 (50.97%), Query Frame = 2
Query:   11 ALALNEVPKKLVVIGAGYIGLEMGSV---WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVK-LTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG-KHGHVDYDKVPGVVYTHPEVASVGKTEEQ 613
            A  L E P++++ +G G+I +E   +   +  +G +VT+      I+   D  +R++  + L    +  M       ++L+ DG K +T E      KT L+ DVV+++ GR P T  L L  +GV     G I V+E   TN+P +YAIGDV    ML   A  +G + V+ + G K    D+ +V   V++ P + + G TEE+
Sbjct:  181 AFYLEEPPRRVLTVGGGFISVEFAGIFNAYKPVGGKVTLCYRNNPILRGFDYTLRQELTKQLVANGIDIMTNENPSKIELNPDGSKHVTFESG----KT-LDVDVVMMAIGRLPRTGYLQLQTVGVNLTDKGAIQVDEFSRTNVPNIYAIGDVTGRIMLTPVAINEGASVVDTIFGSKPRKTDHTRVASAVFSIPPIGTCGLTEEE 381          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_YARLI (Glutathione reductase OS=Yarrowia lipolytica GN=GLR1 PE=3 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 9.580e-19
Identity = 72/252 (28.57%), Postives = 118/252 (46.83%), Query Frame = 2
Query:    8 GALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAG----KHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKF--PFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            G  AL   PK++ V+G GYIG+E+  V+  L SE T+      ++ + D  I+        K+ +  +  + V  +    +G  L      G EK I   D ++ + GR P    L L + G++T+K G I V+E   +++  +Y++GDV     L   A   G      L G    K+   DY  VP  V++HPEV S+G TE   KE   E  V  +   F+A   A   + A    +++   + ++++G
Sbjct:  174 GFFALETQPKRVAVVGGGYIGVELAGVFHGLNSETTLFCRGQTVLRAFDIMIQDTITDYYVKEGINVLKGSGVKKIVKKDNGELLVTYEQDGAEKDI-TLDSLIWTIGREPLKDTLNLGEFGIKTNKRGYIEVDEYQRSSVDNIYSLGDVCGKVELTPMAIAAGRKLSNRLFGPTEFKNQKQDYTDVPSAVFSHPEVGSIGITEAAAKEQYGEENVKVYTSKFVAMYYAMLEEKAPTAYKLVCAGKDEKVVG 424          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TRXR1_MOUSE (Thioredoxin reductase 1, cytoplasmic OS=Mus musculus GN=Txnrd1 PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.634e-18
Identity = 64/204 (31.37%), Postives = 107/204 (52.45%), Query Frame = 2
Query:   32 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM---LKTKVVGVDLSGDGVKLTLEPAAGGEKTIL-EADVVLVSAGRTPFTAGLGLDKIGVE-TDKMGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKE 622
            P K +V+GA Y+ LE     A +G +VTV+   + ++   D ++  +    +E+  +KF+   + TK+  ++    G       +   E+TI  E + VL++ GR   T  +GL+ +GV+  +K G+IPV +   TN+P +YAIGD++ G + L   A + G    + L  G +   DYD VP  V+T  E    G +EE+  E
Sbjct:  304 PGKTLVVGASYVALECAGFLAGIGLDVTVM-VRSILLRGFDQDMANKIGEHMEEHGIKFIRQFVPTKIEQIEAGTPGRLRVTAQSTNSEETIEGEFNTVLLAVGRDSCTRTIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEGKLELTPVAIQAGRLLAQRLYGGSNVKCDYDNVPTTVFTPLEYGCCGLSEEKAVE 506          
The following BLAST results are available for this feature:
BLAST of CN188303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
GSHR_HAEIN1.478e-1933.04Glutathione reductase OS=Haemophilus influenzae GN... [more]
GSHRP_TOBAC1.478e-1932.21Glutathione reductase, chloroplastic (Fragment) OS... [more]
MERA_THIFE1.930e-1928.23Mercuric reductase OS=Thiobacillus ferrooxidans GN... [more]
GSHRP_ARATH4.300e-1931.22Glutathione reductase, chloroplastic OS=Arabidopsi... [more]
GSHR_KLULA7.335e-1929.20Glutathione reductase OS=Kluyveromyces lactis GN=G... [more]
GSHR_CANGA7.335e-1928.97Glutathione reductase OS=Candida glabrata GN=GLR1 ... [more]
GSHR_ASHGO7.335e-1931.10Glutathione reductase OS=Ashbya gossypii GN=GLR1 P... [more]
TYTR_TRYCO9.580e-1931.07Trypanothione reductase OS=Trypanosoma congolense ... [more]
GSHR_YARLI9.580e-1928.57Glutathione reductase OS=Yarrowia lipolytica GN=GL... [more]
TRXR1_MOUSE1.634e-1831.37Thioredoxin reductase 1, cytoplasmic OS=Mus muscul... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188303 ID=CN188303; Name=CN188303; organism=Citrus sinensis; type=EST; length=755bp
AGTCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCA
TTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTT
GGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCAT
GGATGGGGAAATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGA
TGAAATTCATGCTCAAAACTAAGGTGGTGGGAGTTGATTTATCTGGTGAT
GGTGTCAAGTTGACCCTTGAACCAGCAGCTGGTGGTGAAAAGACCATACT
TGAAGCTGATGTTGTTCTTGTGTCTGCTGGCCGGACTCCATTCACCGCTG
GGCTCGGGCTGGATAAGATAGGAGTGGAAACCGATAAGATGGGACGGATA
CCAGTTAATGAGAGATTTGCTACAAACATACCTGGTGTTTATGCGATTGG
AGACGTAATTCCAGGACCAATGTTAGCTCACAAGGCAGAAGAGGATGGGG
TTGCTTGTGTTGAATTCTTAGCTGGTAAACATGGCCATGTGGACTATGAT
AAGGTCCCTGGAGTTGTCTACACACACCCTGAGGTTGCTTCAGTTGGGAA
GACTGAGGAGCAGGTAAAGGAACTTGGTGTTGAGTACCGTGTGGGGAAAT
TCCCTTTCTTGGCAAATAGCCGAGCAAAAGCTATTGATGATGCTGAAGGA
ATAGTCCAGATTTTGGCTGAGGAAGAGACCGACCAGATATTGGGGGGTTC
ATATT
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