CN188303

Overview
NameCN188303
Unique NameCN188303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:88..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: XECC_XANP2 (2-oxopropyl-CoM reductase, carboxylating OS=Xanthobacter autotrophicus (strain ATCC BAA-1158 / Py2) GN=xecC PE=1 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 56/206 (27.18%), Postives = 93/206 (45.15%), Query Frame = 2
Query:   41 LVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDG-VKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFP 655
            +VV+G     +E G  +   G    ++     +    D E R      +++Q M+ +  + V  ++   +G V+  +     GE  I E D V +  G  P +A L    +G++    G + VNE   T++P VYA+GD+I GPM   KA + G      + G+         P  ++TH EV+ +G  EE+ +  G E    K P
Sbjct:  217 VVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKLIKDNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRI-ETDFVFLGLGEQPRSAELA-KILGLDLGPKGEVLVNEYLQTSVPNVYAVGDLIGGPMEMFKARKSGCYAARNVMGEKISYTPKNYPDFLHTHYEVSFLGMGEEEARAAGHEIVTIKMP 420          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TYTR_LEIDO (Trypanothione reductase OS=Leishmania donovani GN=TPR PE=3 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 3.189e-14
Identity = 68/254 (26.77%), Postives = 109/254 (42.91%), Query Frame = 2
Query:   11 ALALNEVPKKLVVIGAGYIGLEMGSV---WARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACV---EFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVK---ELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            A  L + PK+++ +G GYI +E   +   +   G  V +      I+   D E+RK   + L    ++         +  + DG           + T  + D V+++ G  P +  L LDK GV T K G + V+    T++  +YAIGDV    ML   A  +G ACV       GK    D+ KV   V++ P + + G TEE+     E    Y     P + N         E +++I+  E   ++LG
Sbjct:  181 AFYLEDAPKRMLCVGGGYIAVEFAGIFNGYKPCGGYVDLCYRGDLILRGFDTEVRKSLTKQLGANGIRVRTNLNPTKITKNEDGSN----HVHFNDGTEEDYDQVMLAIG-VPRSQALQLDKAGVRTGKNGAVQVDAYSKTSVDNIYAIGDVTNRVMLTPVAINEG-ACVLLETVFGGKPRATDHTKVACAVFSIPPIGTCGMTEEEAAKNYETVAVYASSFTPLMHN--ISGSKHKEFMIRIITNESNGEVLG 426          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: AIFM3_HUMAN (Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIFM3 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.899e-12
Identity = 49/147 (33.33%), Postives = 76/147 (51.70%), Query Frame = 2
Query:   35 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE-IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 472
            + +VV+GAG++G+E+ +        V+VVE          GE + +   +  E  ++KF ++T+V   +L G   KL  E      K ++ ADV +V  G  P T  L    IG+  D  G IPVN+   TN+PGV+A GD +  P+
Sbjct:  333 RNVVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYMQTEVS--ELRGQEGKLK-EVVLKSSK-VVRADVCVVGIGAVPATGFLRQSGIGL--DSRGFIPVNKMMQTNVPGVFAAGDAVTFPL 473          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: GSHR_CAEEL (Probable glutathione reductase 2 OS=Caenorhabditis elegans GN=trxr-2 PE=2 SV=2)

HSP 1 Score: 70.4774 bits (171), Expect = 1.134e-11
Identity = 60/201 (29.85%), Postives = 91/201 (45.27%), Query Frame = 2
Query:   20 LNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDK-MGRIPVNERFATNIPGVYAIGDVIPGPM-LAHKAEEDGVACVEFL-AGKHGHVDYDKVPGVVYTHPEVASVGKTEEQ 613
            L  VP K +++G GY+ LE     +     V V+  +  +    D +        L+   +K     +V  V+  G   K+T     G E    E D V+ +AGR P    L LD  GV TDK  G+I  +E    +  GVYA+GD++     L   A + G    + L +     V +D V   V+T  E+++VG TEE+
Sbjct:  197 LASVPGKTLIVGGGYVALECAGFLSAFNQNVEVLVRSIPL-KGFDRDCVHFVMEHLKTTGVKVKEHVEVERVEAVGSKKKVTFTGNGGVE----EYDTVIWAAGRVPNLKSLNLDNAGVRTDKRSGKILADEFDRASCNGVYAVGDIVQDRQELTPLAIQSGKLLADRLFSNSKQIVRFDGVATTVFTPLELSTVGLTEEE 392          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: AIFM3_MOUSE (Apoptosis-inducing factor 3 OS=Mus musculus GN=Aifm3 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.527e-11
Identity = 46/147 (31.29%), Postives = 73/147 (49.66%), Query Frame = 2
Query:   35 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGE-IRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPM 472
            +  VV+GAG++G+E+ +        V+VVE          GE + +   +  E  ++KF ++T+V   +L     KL  +        +L ADV ++  G  P T  L    IG+  D  G IPVN+   TN+PGV+A GD +  P+
Sbjct:  333 RNAVVVGAGFLGMEVAAYLTEKAHSVSVVELEETPFRRFLGERVGRALMKMFENNRVKFYMQTEVS--ELRAQEGKL--QEVVLKSSKVLRADVCVLGIGAVPATGFLRQSGIGL--DSRGFIPVNKMMQTNVPGVFAAGDAVTFPL 473          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TRXR1_CAEEL (Thioredoxin reductase 1 OS=Caenorhabditis elegans GN=trxr-1 PE=2 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 3.300e-11
Identity = 59/205 (28.78%), Postives = 95/205 (46.34%), Query Frame = 2
Query:   32 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFM--LKTKVVGVDLSGD---GVKLTLEPAAGGEKTIL-----EADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEE 610
            P K + +GA Y+ LE        G +VTV+   + ++   D ++ ++ ++ +    MKF   + T++  +D   D   G      P    E   +     E + +L++ GR   T  +GL  IGVE  K  ++      +T IP VYAIGDV+ G P L   A + G V       G +   +YD++P  V+T  E    G +EE
Sbjct:  351 PGKTLCVGASYVSLECAGFLHGFGFDVTVM-VRSILLRGFDQDMAERIRKHMIAYGMKFEAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILMAIGREAVTDDVGLTTIGVERAKSKKVLGRREQSTTIPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSEE 554          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: NORW_KLEP7 (Nitric oxide reductase FlRd-NAD(+) reductase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) GN=norW PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 4.310e-11
Identity = 43/146 (29.45%), Postives = 79/146 (54.11%), Query Frame = 2
Query:   35 KKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPS-MDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFT-----AGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGD 454
            K+++++G G IG E+   + R G  VTVV+ +A ++ + M  E   + Q  L +  +  MLKT++ G++ + DG++++L+      +  +  D V+ +AG  P T     AGL +++          I VN +  T+ P +YA+GD
Sbjct:  142 KRVLIVGGGLIGCELAMDFCRAGKAVTVVDNSASVLAALMPPEASSRLQHRLTEMGVHLMLKTQLEGLEQTADGIRVSLD-----RQRAITVDAVVAAAGLRPETSLARHAGLQINR---------GIVVNSQLQTSDPAIYALGD 273          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TRXR2_DROME (Thioredoxin reductase 2, mitochondrial OS=Drosophila melanogaster GN=Trxr-2 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 7.352e-11
Identity = 62/205 (30.24%), Postives = 95/205 (46.34%), Query Frame = 2
Query:   32 PKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKL-----TLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDG-VACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKEL 625
            P + +V+GAGY+GLE       LG E TV+   + ++   D ++ +     + ++ + F+  T    V+   DG  L     T     G +      D VL + GR      L LD  GV+T    +I V+   AT++P ++A+GD+I G P L   A   G +      AG    +DY  V   V+T  E + VG +EE   EL
Sbjct:  212 PGRTLVVGAGYVGLECACFLKGLGYEPTVM-VRSIVLRGFDRQMSELLAAMMTERGIPFLGTTIPKAVERQADGRLLVRYRNTTTQMDGSD----VFDTVLWAIGRKGLIEDLNLDAAGVKTHD-DKIVVDAAEATSVPHIFAVGDIIYGRPELTPVAILSGRLLARRLFAGSTQLMDYADVATTVFTPLEYSCVGMSEETAIEL 410          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TRXR_PLAF5 (Thioredoxin reductase OS=Plasmodium falciparum (isolate FCH-5) GN=TR PE=1 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 2
Query:   17 ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKEL 625
            +L + P K +V+GA Y+ LE       LG +VTV    + ++   D +   + +  +E+Q +  M K  ++   L+    K+ +E     +KT    D VL + GR     GL L+ + +  +K   +I  +    TNIP ++A+GDV    P LA  A + G      L      + DY  +P  +YT  E  + G +EE+  EL
Sbjct:  217 SLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVA-VRSIVLRGFDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVE---FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYEL 416          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: TRXR2_PLAF7 (Thioredoxin reductase 2 OS=Plasmodium falciparum (isolate 3D7) GN=trxr2 PE=2 SV=2)

HSP 1 Score: 67.3958 bits (163), Expect = 9.603e-11
Identity = 59/206 (28.64%), Postives = 97/206 (47.09%), Query Frame = 2
Query:   17 ALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKM-GRIPVNERFATNIPGVYAIGDVIPG-PMLAHKAEEDGVACVEFLAGKHGHV-DYDKVPGVVYTHPEVASVGKTEEQVKEL 625
            +L + P K +V+GA Y+ LE       LG +VTV    + ++   D +   + +  +E+Q +  M K  ++   L+    K+ +E     +KT    D VL + GR     GL L+ + +  +K   +I  +    TNIP ++A+GDV    P LA  A + G      L      + DY  +P  +YT  E  + G +EE+  EL
Sbjct:  293 SLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVA-VRSIVLRGFDQQCAVKVKLYMEEQGV--MFKNGILPKKLTKMDDKILVE---FSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSDEIMDYSYIPTSIYTPIEYGACGYSEEKAYEL 492          
The following BLAST results are available for this feature:
BLAST of CN188303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
XECC_XANP23.189e-1427.182-oxopropyl-CoM reductase, carboxylating OS=Xantho... [more]
TYTR_LEIDO3.189e-1426.77Trypanothione reductase OS=Leishmania donovani GN=... [more]
AIFM3_HUMAN3.899e-1233.33Apoptosis-inducing factor 3 OS=Homo sapiens GN=AIF... [more]
GSHR_CAEEL1.134e-1129.85Probable glutathione reductase 2 OS=Caenorhabditis... [more]
AIFM3_MOUSE2.527e-1131.29Apoptosis-inducing factor 3 OS=Mus musculus GN=Aif... [more]
TRXR1_CAEEL3.300e-1128.78Thioredoxin reductase 1 OS=Caenorhabditis elegans ... [more]
NORW_KLEP74.310e-1129.45Nitric oxide reductase FlRd-NAD(+) reductase OS=Kl... [more]
TRXR2_DROME7.352e-1130.24Thioredoxin reductase 2, mitochondrial OS=Drosophi... [more]
TRXR_PLAF59.603e-1128.64Thioredoxin reductase OS=Plasmodium falciparum (is... [more]
TRXR2_PLAF79.603e-1128.64Thioredoxin reductase 2 OS=Plasmodium falciparum (... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188303 ID=CN188303; Name=CN188303; organism=Citrus sinensis; type=EST; length=755bp
AGTCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCA
TTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTT
GGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCAT
GGATGGGGAAATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGA
TGAAATTCATGCTCAAAACTAAGGTGGTGGGAGTTGATTTATCTGGTGAT
GGTGTCAAGTTGACCCTTGAACCAGCAGCTGGTGGTGAAAAGACCATACT
TGAAGCTGATGTTGTTCTTGTGTCTGCTGGCCGGACTCCATTCACCGCTG
GGCTCGGGCTGGATAAGATAGGAGTGGAAACCGATAAGATGGGACGGATA
CCAGTTAATGAGAGATTTGCTACAAACATACCTGGTGTTTATGCGATTGG
AGACGTAATTCCAGGACCAATGTTAGCTCACAAGGCAGAAGAGGATGGGG
TTGCTTGTGTTGAATTCTTAGCTGGTAAACATGGCCATGTGGACTATGAT
AAGGTCCCTGGAGTTGTCTACACACACCCTGAGGTTGCTTCAGTTGGGAA
GACTGAGGAGCAGGTAAAGGAACTTGGTGTTGAGTACCGTGTGGGGAAAT
TCCCTTTCTTGGCAAATAGCCGAGCAAAAGCTATTGATGATGCTGAAGGA
ATAGTCCAGATTTTGGCTGAGGAAGAGACCGACCAGATATTGGGGGGTTC
ATATT
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