CN188303

Overview
NameCN188303
Unique NameCN188303
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length755
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1013 contig Csv1_Contig1013:88..842. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_PSEPW (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas putida (strain W619) GN=sthA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 81/244 (33.20%), Postives = 133/244 (54.51%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L+  P+KL+V GAG IG E  S+++ LG  V +V+    ++  +D EI +          +          V+   +GV L L+    G+K  ++AD +L   GRT  T  LGL+ IG++ +  G+I V+E + T++P +Y  GDVI  P LA  A + G +    +         + VP  +YT PE++S+GK E+++ +  V Y VGK  F + +RA+   + +G+++IL   ET +ILG
Sbjct:  169 LSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEDYERVEGLDNGVILHLK---SGKK--IKADALLWCNGRTGNTDKLGLENIGIKVNSRGQIEVDEAYRTSVPNIYGAGDVIGWPSLASAAHDQGRSAAGSIVDNGSWRFVNDVPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKSMARAQIAGEPQGMLKILFHRETLEILG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_PSEPG (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas putida (strain GB-1) GN=sthA PE=3 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 1.425e-30
Identity = 81/244 (33.20%), Postives = 132/244 (54.10%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L+  P+KL+V GAG IG E  S+++ LG  V +V+    ++  +D EI +          +      +   V+   +GV L L+    G+K  ++AD +L   GRT  T  LGL+ IG++ +  G+I V+E + T +P +Y  GDVI  P LA  A + G +    +         + VP  +YT PE++S+GK E+++ +  V Y VGK  F   +RA+   + +G+++IL   ET +ILG
Sbjct:  169 LSLSHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYERVEGLDNGVILHLK---SGKK--IKADALLWCNGRTGNTDKLGLENIGIKVNSRGQIEVDEAYRTTVPNIYGAGDVIGWPSLASAAHDQGRSAAGSIVDNGSWRFVNDVPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKGMARAQIAGEPQGMLKILFHRETLEILG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_PSEF5 (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=sthA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30
Identity = 80/244 (32.79%), Postives = 131/244 (53.69%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L   P+KL+V GAG IG E  S+++ LG  V +V+    ++  +D EI +          +      +   V+   +GV L L+    G+K  ++AD +L   GRT  T  LG++ IGV+ +  G+I V+E + T +P +Y  GDVI  P LA  A + G +    +         + VP  +YT PE++S+GK E+++ +  V Y VGK  F   +RA+   + +G+++IL   ET ++LG
Sbjct:  169 LSLGHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYDRVEGVDNGVILHLK---SGKK--IKADALLWCNGRTGNTDKLGMENIGVKVNSRGQIEVDENYRTCVPNIYGAGDVIGWPSLASAAHDQGRSAAGSIVDNGSWRFVNDVPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKGMARAQIAGEPQGMLKILFHRETLEVLG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: MERA_SHEPU (Mercuric reductase OS=Shewanella putrefaciens GN=merA PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.072e-30
Identity = 84/247 (34.01%), Postives = 129/247 (52.23%), Query Frame = 2
Query:    5 TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            T AL   E+P+ LVVIG+  + LE+   + RLGSEVT++     ++   D  + ++     EK+ ++ +  T+   V  + DG + TLE  AG     L  D +LVS GR   T  L L  +GV T+K G I VNER  TN+PG+YA GD    P   + A   G      + G +  +D   +P V++T P+VA+VG TEEQ     +E            RA A  + +G ++++ E+ T +++G
Sbjct:  257 TEALFAQELPQHLVVIGSSVVALEIAQAYRRLGSEVTILA-RHTLLYREDPLLGEKLTGCFEKEGIRVLNSTQATKV--THDGSQFTLETNAGD----LRCDRLLVSTGRHANTCQLNLGAVGVTTNKKGEIVVNERMETNVPGIYAAGDCCNMPQFVYVAAAAGSRSGINMTGGYAKLDLSTMPAVIFTDPQVATVGLTEEQANAQDIETDSRVLEMENVPRALANFETDGFIKLVTEKATGRLIG 496          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_AZOVI (Soluble pyridine nucleotide transhydrogenase OS=Azotobacter vinelandii GN=sthA PE=1 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29
Identity = 83/244 (34.02%), Postives = 130/244 (53.28%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L   P++L++ GAG IG E  S+++ LG  V +++    ++  +D EI       L    +      +   V+   +GV L L+    G+K  ++AD  L S GRT  T  LGL+ IG++ +  G+I V+E + T +  +YA GDVI  P LA  A + G +    +         D VP  +YT PE++SVGKTE ++ +  V Y VGK  F   +RA+   +  G+++IL   ET +ILG
Sbjct:  169 LSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDDEISDSLSYHLRNNNVLIRHNEEYERVEGLDNGVILHLK---SGKK--IKADAFLWSNGRTGNTDKLGLENIGLKANGRGQIQVDEHYRTEVSNIYAAGDVIGWPSLASAAYDQGRSAAGSITENDSWRFVDDVPTGIYTIPEISSVGKTERELTQAKVPYEVGKAFFKGMARAQIAVEKAGMLKILFHRETLEILG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_AZOVD (Soluble pyridine nucleotide transhydrogenase OS=Azotobacter vinelandii (strain DJ / ATCC BAA-1303) GN=sthA PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.206e-29
Identity = 83/244 (34.02%), Postives = 130/244 (53.28%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L   P++L++ GAG IG E  S+++ LG  V +++    ++  +D EI       L    +      +   V+   +GV L L+    G+K  ++AD  L S GRT  T  LGL+ IG++ +  G+I V+E + T +  +YA GDVI  P LA  A + G +    +         D VP  +YT PE++SVGKTE ++ +  V Y VGK  F   +RA+   +  G+++IL   ET +ILG
Sbjct:  169 LSLGHTPRRLIIYGAGVIGCEYASIFSGLGVLVDLIDNRDQLLSFLDDEISDSLSYHLRNNNVLIRHNEEYERVEGLDNGVILHLK---SGKK--IKADAFLWSNGRTGNTDKLGLENIGLKANGRGQIQVDEHYRTEVSNIYAAGDVIGWPSLASAAYDQGRSAAGSITENDSWRFVDDVPTGIYTIPEISSVGKTERELTQAKVPYEVGKAFFKGMARAQIAVEKAGMLKILFHRETLEILG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: MERA_STRLI (Mercuric reductase OS=Streptomyces lividans GN=merA PE=2 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 2.058e-29
Identity = 77/247 (31.17%), Postives = 132/247 (53.44%), Query Frame = 2
Query:    5 TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVE-FLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQIL 742
            T A+ L ++P+ L+++G GY+GLE   ++ARLGS VT+    + +    + EI    +    ++ +    +T++  V   G+G+  TL    G ++  + A  +L++ GR   T GLGL+++GV+T + G + V+E   T+ P ++A GDV   P   + A   G    +  L G    +DY  +P V +T P +ASVG TE Q+ E G+ ++          RA    D  G+V+++AE  T ++L
Sbjct:  169 TTAMELQQLPEHLLILGGGYVGLEQAQLFARLGSRVTLA-VRSRLASREEPEISAGIENIFREEGITVHTRTQLRAVRRDGEGILATLTGPDGDQQ--VRASHLLIATGRRSVTNGLGLERVGVKTGERGEVVVDEYLRTDNPRIWAAGDVTCHPDFVYVAAAHGTLVADNALDGAERTLDYTALPKVTFTSPAIASVGLTEAQLTEAGIAHQTRTLSLENVPRALVNRDTRGLVKLIAERGTGKLL 412          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_PSEPF (Soluble pyridine nucleotide transhydrogenase OS=Pseudomonas fluorescens (strain Pf0-1) GN=sthA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29
Identity = 80/244 (32.79%), Postives = 131/244 (53.69%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L   P+KL+V GAG IG E  S+++ LG  V +V+    ++  +D EI +          +      +   V+   +GV L L+    G+K  ++AD +L   GRT  T  LGL+ IGV+ +  G+I V+E + T +  +Y  GDVI  P LA  A + G +    +         + VP  +YT PE++S+GK E+++ +  V Y VGK  F + +RA+   + +G+++IL   ET ++LG
Sbjct:  169 LSLGHTPRKLIVYGAGVIGCEYASIFSGLGVLVELVDNRGQLLSFLDSEISQALSYHFSNNNITVRHNEEYDRVEGVDNGVILHLK---SGKK--IKADALLWCNGRTGNTDQLGLENIGVKVNSRGQIEVDENYRTCVQNIYGAGDVIGWPSLASAAHDQGRSAAGSIVDNGSWRFVNDVPTGIYTIPEISSIGKNEQELTQAKVPYEVGKAFFKSMARAQIAGEPQGMLKILFHRETLEVLG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: STHA_MARMS (Soluble pyridine nucleotide transhydrogenase OS=Marinomonas sp. (strain MWYL1) GN=sthA PE=3 SV=1)

HSP 1 Score: 129.028 bits (323), Expect = 2.687e-29
Identity = 82/244 (33.61%), Postives = 128/244 (52.46%), Query Frame = 2
Query:   14 LALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEEDGVACVEFLAGKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILG 745
            L+L+  P+ L++ GAG IG E  S++  LG  V ++  A  ++  +D EI       L    +          V+ +  GV + +   A G+K  L AD +L   GR+  T  LGL+ I +E +  G++ VN+ + T +  VYA GDVI  P LA  A + G A    + G  G     +VP  +YT PE++SVGKTE ++    V Y VG+  F   +RA+   +A G+++IL   E+ ++LG
Sbjct:  169 LSLSHTPRSLIIYGAGVIGCEYASIFCGLGVRVELINPAKKLLSFLDDEITDALSYHLRDGGVLIRHNETYDSVETTERGVVMHM---ASGKK--LRADALLFCNGRSGNTDNLGLESINLEVNSRGQLAVNDTYQTQVENVYAAGDVIGWPSLASAAYDQGRAAAANMFGAPGGEFISEVPTGIYTIPEISSVGKTEAELTAEKVPYEVGRAFFKNTARAQITGEAVGMLKILFHRESLELLG 407          
BLAST of CN188303 vs. ExPASy Swiss-Prot
Match: YKGC_ECOLI (Probable pyridine nucleotide-disulfide oxidoreductase ykgC OS=Escherichia coli (strain K12) GN=ykgC PE=3 SV=2)

HSP 1 Score: 128.257 bits (321), Expect = 4.584e-29
Identity = 80/251 (31.87%), Postives = 132/251 (52.59%), Query Frame = 2
Query:    5 TGALALNEVPKKLVVIGAGYIGLEMGSVWARLGSEVTVVEFAADIVPSMDGEIRKQFQRSLEKQKMKFMLKTKVVGVDLSGDGVKLTLEPAAGGEKTILEADVVLVSAGRTPFTAGLGLDKIGVETDKMGRIPVNERFATNIPGVYAIGDVIPGPMLAHKAEED-GVACVEFLA-GKHGHVDYDKVPGVVYTHPEVASVGKTEEQVKELGVEYRVGKFPFLANSRAKAIDDAEGIVQILAEEETDQILGGS 751
            TG L L E+P  L ++G GYIG+E  S++A  GS+VT++E A+  +P  D +I       L  Q +  +L   V  +    + V++  E A       L  D +L+++GR P TA L  +  G+  ++ G I V++R  T    ++A+GDV  G    + + +D  +   E L  GK    D   VP  V+  P ++ VG TEEQ +E G + +V   P  A  RA+ ++D  G+++ + + +T ++LG S
Sbjct:  149 TGLLNLKELPGHLGILGGGYIGVEFASMFANFGSKVTILEAASLFLPREDRDIADNIATILRDQGVDIILNAHVERISHHENQVQVHSEHAQ------LAVDALLIASGRQPATASLHPENAGIAVNERGAIVVDKRLHTTADNIWAMGDVTGGLQFTYISLDDYRIVRDELLGEGKRSTDDRKNVPYSVFMTPPLSRVGMTEEQARESGADIQVVTLPVAAIPRARVMNDTRGVLKAIVDNKTQRMLGAS 393          
The following BLAST results are available for this feature:
BLAST of CN188303 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 230
Match NameE-valueIdentityDescription
STHA_PSEPW1.425e-3033.20Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEPG1.425e-3033.20Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_PSEF57.072e-3032.79Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
MERA_SHEPU7.072e-3034.01Mercuric reductase OS=Shewanella putrefaciens GN=m... [more]
STHA_AZOVI1.206e-2934.02Soluble pyridine nucleotide transhydrogenase OS=Az... [more]
STHA_AZOVD1.206e-2934.02Soluble pyridine nucleotide transhydrogenase OS=Az... [more]
MERA_STRLI2.058e-2931.17Mercuric reductase OS=Streptomyces lividans GN=mer... [more]
STHA_PSEPF2.687e-2932.79Soluble pyridine nucleotide transhydrogenase OS=Ps... [more]
STHA_MARMS2.687e-2933.61Soluble pyridine nucleotide transhydrogenase OS=Ma... [more]
YKGC_ECOLI4.584e-2931.87Probable pyridine nucleotide-disulfide oxidoreduct... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005N01_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005N01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188303 ID=CN188303; Name=CN188303; organism=Citrus sinensis; type=EST; length=755bp
AGTCACTGGAGCTTTAGCATTGAATGAAGTTCCTAAGAAACTCGTGGTCA
TTGGGGCAGGCTACATTGGGCTGGAGATGGGCTCAGTTTGGGCCAGGCTT
GGTTCAGAGGTCACTGTTGTTGAATTTGCAGCTGATATCGTCCCAAGCAT
GGATGGGGAAATTCGCAAGCAATTTCAGCGTTCACTTGAGAAGCAGAAGA
TGAAATTCATGCTCAAAACTAAGGTGGTGGGAGTTGATTTATCTGGTGAT
GGTGTCAAGTTGACCCTTGAACCAGCAGCTGGTGGTGAAAAGACCATACT
TGAAGCTGATGTTGTTCTTGTGTCTGCTGGCCGGACTCCATTCACCGCTG
GGCTCGGGCTGGATAAGATAGGAGTGGAAACCGATAAGATGGGACGGATA
CCAGTTAATGAGAGATTTGCTACAAACATACCTGGTGTTTATGCGATTGG
AGACGTAATTCCAGGACCAATGTTAGCTCACAAGGCAGAAGAGGATGGGG
TTGCTTGTGTTGAATTCTTAGCTGGTAAACATGGCCATGTGGACTATGAT
AAGGTCCCTGGAGTTGTCTACACACACCCTGAGGTTGCTTCAGTTGGGAA
GACTGAGGAGCAGGTAAAGGAACTTGGTGTTGAGTACCGTGTGGGGAAAT
TCCCTTTCTTGGCAAATAGCCGAGCAAAAGCTATTGATGATGCTGAAGGA
ATAGTCCAGATTTTGGCTGAGGAAGAGACCGACCAGATATTGGGGGGTTC
ATATT
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