CN188281
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH34_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.4 OS=Oryza sativa subsp. japonica GN=GH3.4 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 9.439e-30 Identity = 62/88 (70.45%), Postives = 71/88 (80.68%), Query Frame = -3 Query: 492 VLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHW 755 V CCL VEE LNSVYRQ R AD SIGPLEIRVV +GTF++LMDYA+SRGASINQYKAPRCV P++ELL+GRV + +FSP P W Sbjct: 515 VFEDCCLAVEEGLNSVYRQCRAADRSIGPLEIRVVADGTFDKLMDYALSRGASINQYKAPRCVRPGPVVELLDGRVQATYFSPKCPKW 602
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH39_ARATH (Putative indole-3-acetic acid-amido synthetase GH3.9 OS=Arabidopsis thaliana GN=GH3.9 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.460e-22 Identity = 52/92 (56.52%), Postives = 66/92 (71.74%), Query Frame = -3 Query: 486 EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCV-SFTPILELLNGRVVSKHFSPAAPHWVP 758 +++ +CC+ VEE L+ +YRQ R + SIG LEIRVVK GTFE+LMD IS+G S NQYK PRCV S + +LLNG V++ FSP P WVP Sbjct: 494 KLMEECCVAVEEELDYIYRQCRTKERSIGALEIRVVKPGTFEKLMDLIISQGGSFNQYKTPRCVKSNSATFKLLNGHVMASFFSPRDPTWVP 585
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH317_ARATH (Indole-3-acetic acid-amido synthetase GH3.17 OS=Arabidopsis thaliana GN=GH3.17 PE=1 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 5.546e-22 Identity = 48/92 (52.17%), Postives = 63/92 (68.48%), Query Frame = -3 Query: 486 DEVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAPHWVP 761 D+ + CC VE+ L+ VYR+ R D SIGPLEIRVV GTF+ LMD+ +S+G+S+NQYK PRCV LE+L+ RV+ + FS P W P Sbjct: 513 DKTMEDCCSEVEDCLDYVYRRCRNRDKSIGPLEIRVVSLGTFDSLMDFCVSQGSSLNQYKTPRCVKSGGALEILDSRVIGRFFSKRVPQWEP 604
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH311_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.11 OS=Oryza sativa subsp. japonica GN=GH3.11 PE=2 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.784e-20 Identity = 47/87 (54.02%), Postives = 62/87 (71.26%), Query Frame = -3 Query: 498 EVLNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAP 758 ++L CC VEESL+ VYR+ R D SIGPLEIR+V+ G F+ LMD +S G+SINQYK PRC+ + L+LLN +V++ FSP P Sbjct: 501 QLLESCCAAVEESLDYVYRRCRAHDRSIGPLEIRLVEAGAFDALMDLLVSHGSSINQYKTPRCIESSLALKLLNSKVIACFFSPQDP 587
BLAST of CN188281 vs. ExPASy Swiss-Prot
Match: GH37_ORYSJ (Probable indole-3-acetic acid-amido synthetase GH3.7 OS=Oryza sativa subsp. japonica GN=GH3.7 PE=2 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 6.796e-12 Identity = 35/85 (41.18%), Postives = 52/85 (61.18%), Query Frame = -3 Query: 498 LNQCCLVVEESLNSVYRQGRVADNSIGPLEIRVVKNGTFEELMDYAISRGASINQYKAPRCVSFTPILELLNGRVVSKHFSPAAP 752 + +CCL VE+ + +YR+ R SI LEIR++ +G F+ LMD+ +SRG S +QYK P + + +L RVV + FS A P Sbjct: 527 MEKCCLAVEDHFDEMYRKIRHR-GSISALEIRILSHGAFDALMDFFVSRGTSASQYKTPTAIRSKEAMMVLEERVVGRFFSQATP 610 The following BLAST results are available for this feature:
BLAST of CN188281 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 15
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188281 ID=CN188281; Name=CN188281; organism=Citrus sinensis; type=EST; length=766bpback to top |