CK939607

Overview
NameCK939607
Unique NameCK939607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: PAPA1_CARPA (Papain OS=Carica papaya PE=1 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 3.755e-37
Identity = 86/207 (41.55%), Postives = 129/207 (62.32%), Query Frame = 3
Query:   69 MGLFKSPTMAMFL---LFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEA-LPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            M +  S +  +F+   LF++   S  D SIV Y +   + +      + ++ +FE+W++KH K Y  + EK  RFEIFK+NL++IDE N +N +Y +GLN FAD++N+E++  + G+  G   T   ++ S   +   G+  +P+ VDWR+KGAV  VK+QGSCGSCWAFS +  +EGI KI TG+L   SEQEL+D     + GCN
Sbjct:    1 MAMIPSISKLLFVAICLFVYMGLSFGDFSIVGYSQNDLTST------ERLIQLFESWMLKHNKIYKNIDEKIYRFEIFKDNLKYIDETNKKNNSYWLGLNVFADMSNDEFKEKYTGSIAGNYTT---TELSYEEVLNDGDVNIPEYVDWRQKGAVTPVKNQGSCGSCWAFSAVVTIEGIIKIRTGNLNEYSEQELLD-CDRRSYGCN 197          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: PAPA4_CARPA (Papaya proteinase 4 OS=Carica papaya PE=1 SV=3)

HSP 1 Score: 151.369 bits (381), Expect = 4.151e-36
Identity = 81/183 (44.26%), Postives = 111/183 (60.66%), Query Frame = 3
Query:  129 SALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            S  D SIV Y +   + +      + ++ +F +W++KH K Y  + EK  RFEIFK+NL++IDE N     Y +GLN F+DL+N+E++  ++G+                ++      LP+SVDWR KGAV  VK QG C SCWAFST+A VEGINKI TG+L+ LSEQELVD     + GCN
Sbjct:   24 SYCDFSIVGYSQDDLTST------ERLIQLFNSWMLKHNKNYKNVDEKLYRFEIFKDNLKYIDERNKMINGYWLGLNEFSDLSNDEFKEKYVGS---LPEDYTNQPYDEEFVNEDIVDLPESVDWRAKGAVTPVKHQGYCESCWAFSTVATVEGINKIKTGNLVELSEQELVD-CDKQSYGCN 196          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP2_HORVU (Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=EPB2 PE=1 SV=1)

HSP 1 Score: 139.428 bits (350), Expect = 1.632e-32
Identity = 82/205 (40.00%), Postives = 110/205 (53.66%), Query Frame = 3
Query:   69 MGLFKSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGC 674
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+  +G       +   S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+D  T  N+GC
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALWD-------LYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPSKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGC 197          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP1_HORVU (Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=EPB1 PE=2 SV=1)

HSP 1 Score: 139.043 bits (349), Expect = 2.132e-32
Identity = 82/205 (40.00%), Postives = 109/205 (53.17%), Query Frame = 3
Query:   69 MGLFKSPTMAMFLLFLFTVSSALDM--SIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE-NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGC 674
            MGL     +   ++      +A+++  +I   DK  ES+ + W        ++E W   H +      EK +RF  FK N  FI  HN   +  Y++ LNRF D+   E+R+  +G           S     Y       LP SVDWR+KGAV  VKDQG CGSCWAFST+ +VEGIN I TGSL+SLSEQEL+D  T  N+GC
Sbjct:    1 MGLLSKKLLVASMVAAVLAVAAVELCSAIPMEDKDLESEEALWD-------LYERWQSAH-RVRRHHAEKHRRFGTFKSNAHFIHSHNKRGDHPYRLHLNRFGDMDQAEFRATFVGDLRRDTPAKPPSVPGFMYAALNVSDLPPSVDWRQKGAVTGVKDQGKCGSCWAFSTVVSVEGINAIRTGSLVSLSEQELIDCDTADNDGC 197          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: BROM1_ANACO (Fruit bromelain OS=Ananas comosus PE=1 SV=1)

HSP 1 Score: 128.642 bits (322), Expect = 2.881e-29
Identity = 74/184 (40.22%), Postives = 106/184 (57.61%), Query Frame = 3
Query:  105 LLFLFTVSSALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR-TYKVGLNRFADLTNEEYRSMHLGARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            L+FLF    A+  S         S +S    +D +M  FE W+ ++G+ Y    EK +RF+IFK N++ I+  NS N  +Y +G+N+F D+T  E+ + + G       +R  + S            A+P S+DWR  GAV EVK+Q  CGSCW+F+ IA VEGI KI TG L+SLSEQE++D
Sbjct:    7 LVFLFLFLCAMWAS--------PSAASRDEPNDPMMKRFEEWMAEYGRVYKDDDEKMRRFQIFKNNVKHIETFNSRNENSYTLGINQFTDMTKSEFVAQYTGVSLPLNIEREPVVSFDDVNI-----SAVPQSIDWRDYGAVNEVKNQNPCGSCWSFAAIATVEGIYKIKTGYLVSLSEQEVLD 177          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATS_MOUSE (Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1)

HSP 1 Score: 128.257 bits (321), Expect = 3.763e-29
Identity = 72/159 (45.28%), Postives = 94/159 (59.12%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT---XXNEGC 674
            ++ W   H K Y    E+E R  I+++NL+FI  HN E      TY+VG+N   D+TNEE     +  R GA R S +S ++  +       LPD+VDWR+KG V EVK QGSCG+CWAFS + A+EG  K+ TG LISLS Q LVD        N+GC
Sbjct:   36 WDLWKKTHEKEYKDKNEEEVRRLIWEKNLKFIMIHNLEYSMGMHTYQVGMNDMGDMTNEE-----ISCRMGALRISRQSPKTVTFRSYSNRTLPDTVDWREKGCVTEVKYQGSCGACWAFSAVGALEGQLKLKTGKLISLSAQNLVDCSNEEKYGNKGC 189          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP2_MAIZE (Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=1)

HSP 1 Score: 126.331 bits (316), Expect = 1.430e-28
Identity = 66/154 (42.86%), Postives = 91/154 (59.09%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNE-GCN 677
            F  + V++GK+Y +  E  KRF IF E+L+ +   N +  +Y++G+NRFAD++ EE+R+  LGA      T       N  +     ALP++ DWR+ G V+ VK+QG CGSCW FST  A+E      TG  ISLSEQ+LVD     N  GCN
Sbjct:   59 FARFAVRYGKSYESAAEVHKRFRIFSESLQLVRSTNRKGLSYRLGINRFADMSWEEFRATRLGAAQNCSATLT----GNHRMRAAAVALPETKDWREDGIVSPVKNQGHCGSCWTFSTTGALEAAYTQATGKPISLSEQQLVDCGFAFNNFGCN 208          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: P34_SOYBN (P34 probable thiol protease OS=Glycine max PE=1 SV=1)

HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28
Identity = 75/195 (38.46%), Postives = 111/195 (56.92%), Query Frame = 3
Query:   93 MAMFLLFLFTVSSALDMSIVSYDKTHES----KSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRT---YKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEAL---PDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            M   +L LF   S L +S  S   TH S      + + T  +V ++F+ W  +HG+ Y+   E+ KR EIFK N  +I + N+  ++   +++GLN+FAD+T +E+   +L A    K  S + K +N+ + +   +    P S DWRKKG + +VK QG CG  WAFS   A+E  + I TG L+SLSEQELVD
Sbjct:    1 MGFLVLLLF---SLLGLSSSSSISTHRSILDLDLTKFTTQKQVSSLFQLWKSEHGRVYHNHEEEAKRLEIFKNNSNYIRDMNANRKSPHSHRLGLNKFADITPQEFSKKYLQA---PKDVSQQIKMANKKMKKEQYSCDHPPASWDWRKKGVITQVKYQGGCGRGWAFSATGAIEAAHAIATGDLVSLSEQELVD 189          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ANAN_ANACO (Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2)

HSP 1 Score: 125.946 bits (315), Expect = 1.868e-28
Identity = 64/159 (40.25%), Postives = 97/159 (61.01%), Query Frame = 3
Query:  174 SKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN-RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            S +S     D +M  FE W+ ++G+ Y    EK  RF+IFK N+  I+  N+ N  +Y +G+N+F D+TN E+ + + G        ++K +    +      ++P S+DWR  GAV  VK+QG CGSCWAF++IA VE I KI  G+L+SLSEQ+++D
Sbjct:   22 SAASCDEPSDPMMKQFEEWMAEYGRVYKDNDEKMLRFQIFKNNVNHIETFNNRNGNSYTLGINQFTDMTNNEFVAQYTGLSLPL---NIKREPVVSFDDVDISSVPQSIDWRDSGAVTSVKNQGRCGSCWAFASIATVESIYKIKRGNLVSLSEQQVLD 177          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ORYC_ORYSJ (Oryzain gamma chain OS=Oryza sativa subsp. japonica GN=Os09g0442300 PE=2 SV=2)

HSP 1 Score: 124.79 bits (312), Expect = 4.161e-28
Identity = 65/154 (42.21%), Postives = 89/154 (57.79%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNE-GCN 677
            F  + V+HGK Y    E ++RF IF E+L  +   N     Y++G+NRFAD++ EE+++  LGA      T   + R      R   ALP++ DWR+ G V+ VKDQG CGSCW FST  ++E      TG  +SLSEQ+LVD  T  N  GC+
Sbjct:   62 FARFAVRHGKRYGDAAEVQRRFRIFSESLELVRSTNRRGLPYRLGINRFADMSWEEFQASRLGAAQNCSATLAGNHRM-----RDAAALPETKDWREDGIVSPVKDQGHCGSCWTFSTTGSLEAAYTQATGKPVSLSEQQLVDCATAYNNFGCS 210          
The following BLAST results are available for this feature:
BLAST of CK939607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
PAPA1_CARPA3.755e-3741.55Papain OS=Carica papaya PE=1 SV=1[more]
PAPA4_CARPA4.151e-3644.26Papaya proteinase 4 OS=Carica papaya PE=1 SV=3[more]
CYSP2_HORVU1.632e-3240.00Cysteine proteinase EP-B 2 OS=Hordeum vulgare GN=E... [more]
CYSP1_HORVU2.132e-3240.00Cysteine proteinase EP-B 1 OS=Hordeum vulgare GN=E... [more]
BROM1_ANACO2.881e-2940.22Fruit bromelain OS=Ananas comosus PE=1 SV=1[more]
CATS_MOUSE3.763e-2945.28Cathepsin S OS=Mus musculus GN=Ctss PE=2 SV=1[more]
CYSP2_MAIZE1.430e-2842.86Cysteine proteinase 2 OS=Zea mays GN=CCP2 PE=2 SV=... [more]
P34_SOYBN1.868e-2838.46P34 probable thiol protease OS=Glycine max PE=1 SV... [more]
ANAN_ANACO1.868e-2840.25Ananain OS=Ananas comosus GN=AN1 PE=1 SV=2[more]
ORYC_ORYSJ4.161e-2842.21Oryzain gamma chain OS=Oryza sativa subsp. japonic... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004748_C03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IVF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939607 ID=CK939607; Name=CK939607; organism=Citrus sinensis; type=EST; length=679bp
GGGGACACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAA
AAGTTCTTTTCTCAAAAGATGGGTTTGTTTAAATCACCAACCATGGCCAT
GTTTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTG
TATCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGAC
GATGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGC
TTATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAA
ATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTT
GGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCA
TCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGA
GCAACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGAT
TGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGG
GAGTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGA
TTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTNN
NNTACATNNNATAATGAAGGATGTAATGG
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