CK939607

Overview
NameCK939607
Unique NameCK939607
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length679
Libraries
Library NameType
Developing fruit flavedo at 165 DAFBcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP1_HOMAM (Digestive cysteine proteinase 1 OS=Homarus americanus GN=LCP1 PE=1 SV=2)

HSP 1 Score: 119.398 bits (298), Expect = 1.748e-26
Identity = 65/161 (40.37%), Postives = 98/161 (60.87%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENR----TYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDS--VDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD--XXTXXNEGCN 677
            +E +  K G+ Y  L E+  R  +F +NL++I+E N +      TY + +N+F+D+TNE++ ++  G + G +  ++ +           +A P+S  VDWR KGAV  VKDQG CGSCWAFST   +EG + + TG L+SLSEQ+LVD    +  N+GCN
Sbjct:   20 WEEFKGKFGRKYVDLEEERYRLNVFLDNLQYIEEFNKKYERGEVTYNLAINQFSDMTNEKFNAVMKGYKKGPRPAAVFTST---------DAAPESTEVDWRTKGAVTPVKDQGQCGSCWAFSTTGGIEGQHFLKTGRLVSLSEQQLVDCAGGSYYNQGCN 171          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP6_DICDI (Cysteine proteinase 6 OS=Dictyostelium discoideum GN=cprF PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 67/155 (43.23%), Postives = 92/155 (59.35%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTG--SLISLSEQELVD-XXTXXNEGC 674
            F  W++ H + Y++  E   RF IFK N+ +I+E N++     +GLN FAD+TNEEYR+ +LG  F A  +SL+   S +     G    +SVDWR KGAV  +K+QG CG CW+FS   A EG   I  G   L S+SEQ+L+D   +  N GC
Sbjct:   30 FTNWMIAHQRHYSS-EEFNGRFNIFKANMDYINEWNTKGSETVLGLNVFADITNEEYRATYLGTPFDA--SSLEMTPSEKVF---GGVQANSVDWRAKGAVTPIKNQGECGGCWSFSATGATEGAQYIANGDSDLTSVSEQQLIDCSGSYGNNGC 178          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATS_SAIBB (Cathepsin S OS=Saimiri boliviensis boliviensis GN=CTSS PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 65/155 (41.94%), Postives = 91/155 (58.71%), Query Frame = 3
Query:  228 WLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGCN 677
            W   +GK Y    E+  R  I+++NL+F+  HN E+     +Y +G+N   D+T+EE  S+       + R   + +R+  Y     + LPDSVDWR+KG V EVK QGSCG+CWAFS + A+E   K+ TG L+SLS Q LVD      N+GCN
Sbjct:   31 WKKTYGKQYKEKNEEAVRRLIWEKNLKFVMLHNLEHSMGMHSYDLGMNHLGDMTSEEVMSL-----MSSLRVPNQWQRNITYKSNPNQMLPDSVDWREKGCVTEVKYQGSCGACWAFSAVGALEAQLKLKTGKLVSLSAQNLVDCSEKYGNKGCN 180          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATH_PIG (Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 71/183 (38.80%), Postives = 103/183 (56.28%), Query Frame = 3
Query:  132 ALDMSIVSYDKTHESKSSSWRTDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGA-VAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD-XXTXXNEGC 674
            A ++++ S++K H                F++W+V+H K Y+ L E   R ++F  N R I+ HN+ N T+K+GLN+F+D++ +E R  +L +          S     YL   G   P S+DWRKKG  V+ VK+QGSCGSCW FST  A+E    I TG ++SL+EQ+LVD      N GC
Sbjct:   22 ASNLAVSSFEKLH----------------FKSWMVQHQKKYS-LEEYHHRLQVFVSNWRKINAHNAGNHTFKLGLNQFSDMSFDEIRHKYLWSE-----PQNCSATKGNYLRGTGP-YPPSMDWRKKGNFVSPVKNQGSCGSCWTFSTTGALESAVAIATGKMLSLAEQQLVDCAQNFNNHGC 181          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: ALEU_HORVU (Thiol protease aleurain OS=Hordeum vulgare PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.283e-26
Identity = 63/154 (40.91%), Postives = 90/154 (58.44%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNE-GCN 677
            F  + V++GK+Y +  E  +RF IF E+L  +   N +   Y++G+NRF+D++ EE+++  LGA      T      +  +L R   ALP++ DWR+ G V+ VK+Q  CGSCW FST  A+E      TG  ISLSEQ+LVD     N  GCN
Sbjct:   61 FARFAVRYGKSYESAAEVRRRFRIFSESLEEVRSTNRKGLPYRLGINRFSDMSWEEFQATRLGAAQTCSATL-----AGNHLMRDAAALPETKDWREDGIVSPVKNQAHCGSCWTFSTTGALEAAYTQATGKNISLSEQQLVDCAGGFNNFGCN 209          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATLL_PHACE (Cathepsin L-like proteinase OS=Phaedon cochleariae PE=2 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.643e-26
Identity = 70/166 (42.17%), Postives = 100/166 (60.24%), Query Frame = 3
Query:  195 TDDEVMAMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSE----NRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT-XXNEGCN 677
            +D E+ A F+     H + Y +L E++ RF IF++ LR I EHN +      TY + +N+F+D+T+EE+R M +  +  A R +L+          VG A P+S+DWR KG V  V++QG CGSCWA ST AA+E  + I +GS + LS Q+LVD  T   N GCN
Sbjct:   18 SDQELWADFKK---THARTYKSLREEKLRFNIFQDTLRQIAEHNVKYENGESTYYLAINKFSDITDEEFRDMLM--KNEASRPNLEGLEVADLT--VGAA-PESIDWRSKGVVLPVRNQGECGSCWALSTAAAIESQSAIKSGSKVPLSPQQLVDCSTSYGNHGCN 175          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP_PEA (Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 65/144 (45.14%), Postives = 86/144 (59.72%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNR-YLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVD 647
            F ++  K  K+Y    E + RF +FK NL     H + + T + G+ +F+DLT  E+R   LG +   KR  L +       LP     LP+  DWR+KGAV  VKDQGSCGSCWAFST  A+EG + + TG L+SLSEQ+LVD
Sbjct:   48 FTSFKSKFSKSYATKEEHDYRFGVFKSNLIKAKLHQNRDPTAEHGITKFSDLTASEFRRQFLGLK---KRLRLPAHAQKAPILPTTN--LPEDFDWREKGAVTPVKDQGSCGSCWAFSTTGALEGAHYLATGKLVSLSEQQLVD 186          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CATS_BOVIN (Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2)

HSP 1 Score: 117.087 bits (292), Expect = 8.676e-26
Identity = 64/159 (40.25%), Postives = 93/159 (58.49%), Query Frame = 3
Query:  219 FEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSEN----RTYKVGLNRFADLTNEEYRSMHLGARFGAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXT--XXNEGCN 677
            ++ W   +GK Y    E+  R  I+++NL+ +  HN E+     +Y++G+N   D+T+EE  S+       + R   +  R+  Y     + LPDS+DWR+KG V EVK QG+CGSCWAFS + A+E   K+ TG L+SLS Q LVD  T    N+GCN
Sbjct:   28 WDLWKKTYGKQYKEKNEEVARRLIWEKNLKTVTLHNLEHSMGMHSYELGMNHLGDMTSEEVISL-----MSSLRVPSQWPRNVTYKSDPNQKLPDSMDWREKGCVTEVKYQGACGSCWAFSAVGALEAQVKLKTGKLVSLSAQNLVDCSTAKYGNKGCN 181          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: LMCPB_LEIME (Cysteine proteinase B OS=Leishmania mexicana GN=LMCPB PE=2 SV=2)

HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25
Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 3
Query:  213 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV      N+GC+
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVS-CDDMNDGCD 189          
BLAST of CK939607 vs. ExPASy Swiss-Prot
Match: CYSP2_LEIPI (Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS2 PE=1 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.133e-25
Identity = 65/158 (41.14%), Postives = 96/158 (60.76%), Query Frame = 3
Query:  213 AMFEAWLVKHGKAYNALGEKEKRFEIFKENLRFIDEHNSENRTYKVGLNRFADLTNEEYRSMHL-GARF--GAKRTSLKSKRSNRYLPRVGEALPDSVDWRKKGAVAEVKDQGSCGSCWAFSTIAAVEGINKIVTGSLISLSEQELVDXXTXXNEGCN 677
            A+FE +   +G+AY  L E+++R   F+ NL  + EH + N   + G+ +F DL+  E+ + +L GA +   AKR + +  R  R       A+PD+VDWR+KGAV  VKDQG+CGSCWAFS +  +EG   +    L+SLSEQ+LV      N+GC+
Sbjct:   36 ALFEEFKRTYGRAYETLAEEQQRLANFERNLELMREHQARNPHAQFGITKFFDLSEAEFAARYLNGAAYFAAAKRHAAQHYRKAR---ADLSAVPDAVDWREKGAVTPVKDQGACGSCWAFSAVGNIEGQWYLAGHELVSLSEQQLVS-CDDMNDGCD 189          
The following BLAST results are available for this feature:
BLAST of CK939607 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 152
Match NameE-valueIdentityDescription
CYSP1_HOMAM1.748e-2640.37Digestive cysteine proteinase 1 OS=Homarus america... [more]
CYSP6_DICDI2.283e-2643.23Cysteine proteinase 6 OS=Dictyostelium discoideum ... [more]
CATS_SAIBB2.283e-2641.94Cathepsin S OS=Saimiri boliviensis boliviensis GN=... [more]
CATH_PIG2.283e-2638.80Cathepsin H OS=Sus scrofa GN=CTSH PE=1 SV=1[more]
ALEU_HORVU2.283e-2640.91Thiol protease aleurain OS=Hordeum vulgare PE=2 SV... [more]
CATLL_PHACE6.643e-2642.17Cathepsin L-like proteinase OS=Phaedon cochleariae... [more]
CYSP_PEA8.676e-2645.14Cysteine proteinase 15A OS=Pisum sativum PE=2 SV=1[more]
CATS_BOVIN8.676e-2640.25Cathepsin S OS=Bos taurus GN=CTSS PE=1 SV=2[more]
LMCPB_LEIME1.133e-2541.14Cysteine proteinase B OS=Leishmania mexicana GN=LM... [more]
CYSP2_LEIPI1.133e-2541.14Cysteine proteinase 2 OS=Leishmania pifanoi GN=CYS... [more]

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Properties
Property NameValue
Genbank descriptionCGF1004748_C03 Developing fruit flavedo at 165 DAFB Citrus sinensis cDNA clone F1650002_IVF_C03 5, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CK939607 ID=CK939607; Name=CK939607; organism=Citrus sinensis; type=EST; length=679bp
GGGGACACTCTGCCTCATCAATCCATCTTCTTCTCCCAAAAAGAAAAAAA
AAGTTCTTTTCTCAAAAGATGGGTTTGTTTAAATCACCAACCATGGCCAT
GTTTTTACTTTTTCTCTTCACTGTTTCATCTGCCTTGGACATGTCGATTG
TATCTTATGATAAAACCCATGAGTCAAAATCTAGCAGCTGGAGGACCGAC
GATGAGGTTATGGCTATGTTCGAGGCCTGGCTCGTGAAGCATGGCAAGGC
TTATAACGCTTTGGGTGAAAAAGAGAAGAGGTTTGAGATCTTTAAGGAAA
ATCTTAGGTTTATTGATGAACATAACTCAGAGAACCGGACCTACAAGGTT
GGGTTGAACCGGTTTGCTGATTTGACCAACGAGGAGTACCGGTCCATGCA
TCTGGGTGCACGCTTTGGTGCTAAAAGGACTTCCTTGAAATCAAAGAGGA
GCAACCGTTATCTGCCACGTGTCGGCGAGGCGTTGCCGGACTCTGTTGAT
TGGAGGAAGAAAGGAGCTGTCGCTGAAGTTAAAGATCAAGGAAGCTGTGG
GAGTTGCTGGGCATTTTCAACCATTGCAGCTGTAGAGGGTATAAACAAGA
TTGTTACAGGTAGCCTGATCTCACTATCCGAGCAGGAGTTGGTGGATTNN
NNTACATNNNATAATGAAGGATGTAATGG
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