CN188274
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPZ_CHICK (T-complex protein 1 subunit zeta OS=Gallus gallus GN=CCT6 PE=1 SV=3) HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24 Identity = 56/145 (38.62%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 T+LGPKG KM+ + +G++ +T DG +L +M++ P A ++ +++ +QD GDGTT+ V+I G LLKQ + +S G+HP ++++ A A++VL + V E+ DR++L+ A TSL +KV ++ + +L VDSVL+V Sbjct: 35 TNLGPKGTMKMLVSGAGDIKLTKDGNVLLQEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIVAEGFEIAKEKALEVLEQVKVTKEM-DRETLIDVAKTSLRTKVHTELADILTEAVVDSVLAV 178
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA_YEAST (T-complex protein 1 subunit alpha OS=Saccharomyces cerevisiae GN=TCP1 PE=1 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24 Identity = 59/146 (40.41%), Postives = 93/146 (63.70%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLT-AMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 +SLGP G+DKM+ G+ +TNDGATIL+ ++V PA K+LVEL++ QD GDGTT+VV+IA LLK+ L+ + IHPT I A A+ + ++ V+ +++L+ A TS++SK++ S + + VD++L+V Sbjct: 42 SSLGPVGLDKMLVDDIGDFTVTNDGATILSLLDVQHPAGKILVELAQQQDREIGDGTTSVVIIASELLKRANELVKNKIHPTTIITGFRVALREAIRFINEVLSTSVDTLGKETLINIAKTSMSSKIIGADSDFFSNMVVDALLAV 187
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA_CAEEL (T-complex protein 1 subunit alpha OS=Caenorhabditis elegans GN=cct-1 PE=2 SV=2) HSP 1 Score: 111.309 bits (277), Expect = 5.883e-24 Identity = 61/146 (41.78%), Postives = 92/146 (63.01%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTA-MAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 +SLGP G+DKM+ G+VI+TNDGATIL ++EV PA K+LVEL++ QD GDGTT+VV++A LLK+ L+ +HPT I + A AV ++ ++ + R S+V +A TS++SK++ + L VD+ +V Sbjct: 38 SSLGPVGLDKMLVDDVGDVIVTNDGATILKQLEVEHPAGKVLVELAQLQDEEVGDGTTSVVIVAAELLKRADELVKQKVHPTTIINGYRLACKEAVKYISENISFTSDSIGRQSVVNAAKTSMSSKIIGPDADFFGELVVDAAEAV 183
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA_SCHMA (T-complex protein 1 subunit alpha OS=Schistosoma mansoni GN=TCP-1A PE=2 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 7.684e-24 Identity = 61/146 (41.78%), Postives = 94/146 (64.38%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTA-MAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 TSLGP G+DKM+ G+V ITNDGATIL ++V PAAK+LV+L++ QD GDGTT+VV++A ALLK L+S +HPT + + A A + MA V + L+ A T+++SK+++ + + + +AVD++++V Sbjct: 31 TSLGPVGLDKMLVDDVGDVTITNDGATILKLLDVEHPAAKILVQLAQLQDEEVGDGTTSVVILAAALLKNADELISRFVHPTTVINGYRLACREACKYIQEHMAYDVNKLGKAGLINVARTAMSSKLINLDADMFSQMAVDALMAV 176
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPZ_RABIT (T-complex protein 1 subunit zeta OS=Oryctolagus cuniculus GN=CCT6 PE=2 SV=3) HSP 1 Score: 110.153 bits (274), Expect = 1.311e-23 Identity = 55/145 (37.93%), Postives = 95/145 (65.52%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 T+LGPKG KM+ + +G++ +T DG +L++M++ P A ++ +++ +QD GDGTT+ V+I G LLKQ + +S G+HP +I++ A A+ VL + V E+ DR++L+ A TSL +KV ++ + +L VDS+L++ Sbjct: 36 TNLGPKGTMKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFEAAKEKALQVLEQIKVSREM-DRETLIDVARTSLRTKVHAELADVLTEAVVDSILAI 179
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPB_CAEEL (T-complex protein 1 subunit beta OS=Caenorhabditis elegans GN=cct-2 PE=2 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.311e-23 Identity = 64/147 (43.54%), Postives = 94/147 (63.95%), Query Frame = 1 Query: 325 TSLGPKGMDKMIST----ASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVL 753 ++LGPKGMDK++ + ++G + +TNDGATIL + V PAAK+LV++S +QD GDGTT+V V+A LLK+ L++ IHP I +A A + L ++ + RD L+K A T+L SK++SQ+ A LAVD+VL Sbjct: 36 STLGPKGMDKILISGNPESAGGIKVTNDGATILKSIGVDNPAAKVLVDMSMTQDHEVGDGTTSVTVLAAELLKEAEKLVNQRIHPQTIISGYRRALGIAQESLKKSSIESGDNIRDDLLKIARTTLGSKILSQHKEHFAQLAVDAVL 182
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA_MONDO (T-complex protein 1 subunit alpha OS=Monodelphis domestica GN=TCP1 PE=2 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.311e-23 Identity = 64/146 (43.84%), Postives = 88/146 (60.27%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTA-MAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 +SLGP G+DKM+ G+V ITNDGATIL +EV PAAK+L EL+ QD GDGTT+VV+IA LLK L+ IHPT I A AV + + + + +D L+ +A TS++SK++ A + VD+VL+V Sbjct: 34 SSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSIIGGYRLACKEAVRYINENLIINTDELGKDCLINAAKTSMSSKIIGIDGDFFANMVVDAVLAV 179
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA1_MOUSE (T-complex protein 1 subunit alpha A OS=Mus musculus GN=Tcp1 PE=1 SV=2) HSP 1 Score: 110.153 bits (274), Expect = 1.311e-23 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTA-MAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 +SLGP G+DKM+ G+V ITNDGATIL +EV PAAK+L EL+ QD GDGTT+VV+IA LLK L+ IHPT + A AV + + + + RD L +A TS++SK++ A + VD+VL+V Sbjct: 34 SSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISGYRLACKEAVRYINENLIINADELGRDCLTNTAKTSMSSKIIGINGDYFANMVVDAVLAV 179
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: THSG_SULSO (Thermosome subunit gamma OS=Sulfolobus solfataricus GN=thsC PE=3 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.712e-23 Identity = 65/147 (44.22%), Postives = 93/147 (63.27%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTAMAVPVELSDRDSLVKSASTSLNSKVVSQYSTL--LAPLAVDSVLSV 759 +SLGPKG+DKM+ +V ITNDGATI+ MEV P AK+L+E +K+ D GDGTT+VVV+AG LL++ LL+ IHPTVI + KA ++++L +A + DR + T+L+SK S TL + L +D+ L+V Sbjct: 34 SSLGPKGLDKMLVEGQ-DVTITNDGATIVKNMEVQHPTAKLLIETAKTVDTEVGDGTTSVVVLAGLLLEKAEDLLNQKIHPTVIIEGYRKALNSSLELLKNIADKISPEDRKIVHDLVYTTLSSKFFSTEHTLEKIINLVIDASLAV 179
BLAST of CN188274 vs. ExPASy Swiss-Prot
Match: TCPA_MACFA (T-complex protein 1 subunit alpha OS=Macaca fascicularis GN=TCP1 PE=2 SV=1) HSP 1 Score: 109.768 bits (273), Expect = 1.712e-23 Identity = 64/146 (43.84%), Postives = 87/146 (59.59%), Query Frame = 1 Query: 325 TSLGPKGMDKMISTASGEVIITNDGATILNKMEVLQPAAKMLVELSKSQDAAAGDGTTTVVVIAGALLKQCLILLSSGIHPTVISDTLHKAAIHAVDVLTA-MAVPVELSDRDSLVKSASTSLNSKVVSQYSTLLAPLAVDSVLSV 759 +SLGP G+DKM+ G+V ITNDGATIL +EV PAAK+L EL+ QD GDGTT+VV+IA LLK L IHPT + A AV + + V + RD L+ +A TS++SK++ A + VD+VL++ Sbjct: 34 SSLGPVGLDKMLVDDIGDVTITNDGATILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELGKQKIHPTSVISGYRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAI 179 The following BLAST results are available for this feature:
BLAST of CN188274 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 483
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188274 ID=CN188274; Name=CN188274; organism=Citrus sinensis; type=EST; length=760bpback to top |