CN188271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_ASPFU (Ubiquitin-conjugating enzyme E2 2 OS=Aspergillus fumigatus GN=ubc2 PE=3 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 1.588e-22 Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = -2 Query: 271 NPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 708 +P AG SA V + N+ W+ IIGP DT +E G F +M F YPN PP VKF ++++HPNVY G +C+ IL RW P + V PN SPANVEA+ ++D R ++ K+V V +S E Sbjct: 19 DPPAGVSASPVAD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPGVKFISQMFHPNVYGTGELCLDIL-------------QNRWSPTYDVAAILTSIQSLLNDPNTSSPANVEASNLYKDNRKEYIKRVRETVEKSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_NEUCR (Ubiquitin-conjugating enzyme E2 2 OS=Neurospora crassa GN=mus-8 PE=3 SV=3) HSP 1 Score: 106.301 bits (264), Expect = 2.074e-22 Identity = 56/146 (38.36%), Postives = 76/146 (52.05%), Query Frame = -2 Query: 271 NPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 708 +P AG SA V + N+ W+ IIGP DT +E G F +M F YPN PP+VKF +E++HPNVY G +C+ IL RW P + V PN S ANVEA+ ++D R ++ K+V V +S E Sbjct: 19 DPPAGVSASPVPD-NVMTWNAVIIGPADTPFEDGTFRLVMHFEEQYPNKPPSVKFISEMFHPNVYATGELCLDIL-------------QNRWSPTYDVAAVLTSIQSLLNDPNTGSRANVEASNLYKDNRKEYHKRVRETVEKSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_CANAL (Ubiquitin-conjugating enzyme E2 2 OS=Candida albicans GN=UBC2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.709e-22 Identity = 55/145 (37.93%), Postives = 76/145 (52.41%), Query Frame = -2 Query: 277 KNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 711 ++P +G SA + + N+ +W+ IIGP DT +E G F ++SF YPN PP VKF +E++HPNVY G +C+ IL RW P + V PN SPANVEAA ++D R + K+V V S Sbjct: 18 QDPPSGVSASPLPD-NVMKWNAVIIGPSDTPFEDGTFRLLLSFDEQYPNKPPQVKFISEMFHPNVYASGELCLDIL-------------QNRWSPTYDVSSILTSVQSLLNDPNISSPANVEAANLYKDHRSLYVKRVRETVENS 148
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBCD6_DROME (Ubiquitin-conjugating enzyme E2-17 kDa OS=Drosophila melanogaster GN=UbcD6 PE=2 SV=2) HSP 1 Score: 104.76 bits (260), Expect = 6.036e-22 Identity = 53/147 (36.05%), Postives = 76/147 (51.70%), Query Frame = -2 Query: 277 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 717 L ++P G S G + NI W+ I GP DT +E G F + F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN AA+ +++ R +++K+V CV +S Sbjct: 16 LQEDPPTGVS-GAPTDNNIMIWNAVIFGPHDTPFEDGTFKLTIEFTEEYPNKPPTVRFVSKVFHPNVYADGGICLDIL-------------QNRWSPTYDVSAILTSIQSLLSDPNPNSPANSTAAQLYKENRREYEKRVKACVEQS 148
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_SCHPO (Ubiquitin-conjugating enzyme E2 2 OS=Schizosaccharomyces pombe GN=rhp6 PE=1 SV=3) HSP 1 Score: 104.375 bits (259), Expect = 7.883e-22 Identity = 54/147 (36.73%), Postives = 78/147 (53.06%), Query Frame = -2 Query: 271 KNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 711 ++P AG SA V + N+ W+ IIGP DT +E G F ++SF YPN PP VKF + ++HPNVY +G +C+ IL RW P + V PN+ SPAN EAA+ R+ + ++ ++V + V S E Sbjct: 18 QDPPAGVSASPVSD-NVMLWNAVIIGPADTPFEDGTFKLVLSFDEQYPNKPPLVKFVSTMFHPNVYANGELCLDIL-------------QNRWSPTYDVAAILTSIQSLLNDPNNASPANAEAAQLHRENKKEYVRRVRKTVEDSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_DEBHA (Ubiquitin-conjugating enzyme E2 2 OS=Debaryomyces hansenii GN=UBC2 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 1.030e-21 Identity = 54/141 (38.30%), Postives = 72/141 (51.06%), Query Frame = -2 Query: 277 AGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 699 +G SA + + N+ W+ IIGP DT +E G F I+ F YPN PP+VKF +E++HPNVY G +C+ IL RW P + V PN SPANVEAA ++D R + K+V V S Sbjct: 22 SGVSASPLPD-NVMSWNAVIIGPADTPFEDGTFRLILQFDEQYPNKPPSVKFISEMFHPNVYASGELCLDIL-------------QNRWSPTYDVSSILTSIQSLLNDPNISSPANVEAANLYKDHRSQYIKRVRETVENS 148
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_YEAST (Ubiquitin-conjugating enzyme E2 2 OS=Saccharomyces cerevisiae GN=RAD6 PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 51/132 (38.64%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 271 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 666 N+ W+ IIGP DT YE G F ++ F YPN PP VKF +E++HPNVY +G +C+ IL RW P + V PN SPANVEAA ++D + + K+V V +S E Sbjct: 32 NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL-------------QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_CANGA (Ubiquitin-conjugating enzyme E2 2 OS=Candida glabrata GN=UBC2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 51/132 (38.64%), Postives = 69/132 (52.27%), Query Frame = -2 Query: 271 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 666 N+ W+ IIGP DT YE G F ++ F +YPN PP VKF +E++HPNVY +G +C+ IL RW P + V PN SPANVEAA ++D + + K+V V +S E Sbjct: 32 NVMVWNAMIIGPADTPYEDGTFRLLLEFDEDYPNKPPHVKFLSEMFHPNVYANGEICLDIL-------------QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYIKRVKETVEKSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_ASHGO (Ubiquitin-conjugating enzyme E2 2 OS=Ashbya gossypii GN=UBC2 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.345e-21 Identity = 51/132 (38.64%), Postives = 68/132 (51.52%), Query Frame = -2 Query: 271 NIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRSQE 666 N+ W+ IIGP DT YE G F ++ F YPN PP VKF +E++HPNVY +G +C+ IL RW P + V PN SPANVEAA ++D + + K+V V +S E Sbjct: 32 NVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYANGEICLDIL-------------QNRWTPTYDVASILTSIQSLFNDPNPASPANVEAATLFKDHKSQYVKRVKETVEKSWE 150
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBE2B_RAT (Ubiquitin-conjugating enzyme E2 B OS=Rattus norvegicus GN=Ube2b PE=2 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 1.756e-21 Identity = 51/147 (34.69%), Postives = 77/147 (52.38%), Query Frame = -2 Query: 277 LCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKKKVGRCVRRS 717 L ++P G S G E NI +W+ I GP T +E G F ++ F YPN PPTV+F ++++HPNVY DG +C+ IL RW P + V PN SPAN +AA+ +++ + +++K+V V +S Sbjct: 16 LQEDPPVGVS-GAPSENNIMQWNAVIFGPEGTPFEDGTFKLVIEFSEEYPNKPPTVRFLSKMFHPNVYADGSICLDIL-------------QNRWSPTYDVSSILTSIQSLLDEPNPNSPANSQAAQLYQENKREYEKRVSAIVEQS 148 The following BLAST results are available for this feature:
BLAST of CN188271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 165
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188271 ID=CN188271; Name=CN188271; organism=Citrus sinensis; type=EST; length=805bpback to top |