CN188271
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D1_MOUSE (Ubiquitin-conjugating enzyme E2 D1 OS=Mus musculus GN=Ube2d1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.906e-18 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D1_HUMAN (Ubiquitin-conjugating enzyme E2 D1 OS=Homo sapiens GN=UBE2D1 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.906e-18 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D1_BOVIN (Ubiquitin-conjugating enzyme E2 D1 OS=Bos taurus GN=UBE2D1 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.906e-18 Identity = 45/139 (32.37%), Postives = 73/139 (52.52%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GPPD+ Y+GG F + FP++YP PP + FTT+I+HPN+ +G +C+ IL +W P TV PN + P + A+ ++ ++ + + Sbjct: 12 DLQRDPPAHCSAGPVGD-DLFHWQATIMGPPDSAYQGGVFFLTVHFPTDYPFKPPKIAFTTKIYHPNINSNGSICLDILR-------------SQWSPALTVSKVLLSICSLLCDPNPDDPLVPDIAQIYKSDKEKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBC2_CAEEL (Ubiquitin-conjugating enzyme E2 2 OS=Caenorhabditis elegans GN=let-70 PE=1 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.538e-17 Identity = 46/139 (33.09%), Postives = 72/139 (51.80%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GPP++ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLGRDPPAQCSAGPVGD-DLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDRERYNQ 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UBE2C_SPISO (Ubiquitin-conjugating enzyme E2 C OS=Spisula solidissima GN=UBE2C PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 45/124 (36.29%), Postives = 60/124 (48.39%), Query Frame = -2 Query: 304 DETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 675 D N+F+W T+ GP DT+YE + + FPS+YP PP VKFTT WHPNV G +C+ IL E W + V PN+ SP N +AA W + ++KK Sbjct: 55 DGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQSGNICLDIL-------------KENWTASYDVRTILLSLQSLLGEPNNASPLNAQAADMW-SNQTEYKK 164
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D2_XENLA (Ubiquitin-conjugating enzyme E2 D2 OS=Xenopus laevis GN=ube2d2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D2_RAT (Ubiquitin-conjugating enzyme E2 D2 OS=Rattus norvegicus GN=Ube2d2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D2_MOUSE (Ubiquitin-conjugating enzyme E2 D2 OS=Mus musculus GN=Ube2d2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D2_HUMAN (Ubiquitin-conjugating enzyme E2 D2 OS=Homo sapiens GN=UBE2D2 PE=1 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136
BLAST of CN188271 vs. ExPASy Swiss-Prot
Match: UB2D2_BOVIN (Ubiquitin-conjugating enzyme E2 D2 OS=Bos taurus GN=UBE2D2 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 2.009e-17 Identity = 46/139 (33.09%), Postives = 71/139 (51.08%), Query Frame = -2 Query: 304 DLCKNPVAGFSAGLVDETNIFEWSVTIIGPPDTLYEGGFFNAIMSFPSNYPNSPPTVKFTTEIWHPNVYPDGRVCISILHPPGDDPNGYELASERWMPVHTVEXXXXXXXXXXXSPNDESPANVEAAKEWRDRRDDFKK 720 DL ++P A SAG V + ++F W TI+GP D+ Y+GG F + FP++YP PP V FTT I+HPN+ +G +C+ IL +W P T+ PN + P E A+ ++ R+ + + Sbjct: 12 DLARDPPAQCSAGPVGD-DMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINSNGSICLDILR-------------SQWSPALTISKVLLSICSLLCDPNPDDPLVPEIARIYKTDREKYNR 136 The following BLAST results are available for this feature:
BLAST of CN188271 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 165
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188271 ID=CN188271; Name=CN188271; organism=Citrus sinensis; type=EST; length=805bpback to top |