CN188253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD15_ORYSJ (MADS-box transcription factor 15 OS=Oryza sativa subsp. japonica GN=MADS15 PE=1 SV=2) HSP 1 Score: 122.479 bits (306), Expect = 1.710e-27 Identity = 65/132 (49.24%), Postives = 89/132 (67.42%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS----VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGK+++KRIEN NRQVTF KRRNGLLKKA+E+SVLCDAEV+ IVFS +G+LYEY+ +S + +RY A + S E N + E KL+ +I +Q +++++GE L LN KEL+ +E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRNGLLKKAHEISVLCDAEVAAIVFSPKGKLYEYATDSRMDKILERYERYSYAEKALISAESESEGN---WCHEYRKLKAKIETIQKCHKHLMGEDLESLNLKELQQLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL8_SINAL (Agamous-like MADS-box protein AGL8 homolog OS=Sinapis alba GN=AGL8 PE=2 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 2.234e-27 Identity = 59/129 (45.74%), Postives = 93/129 (72.09%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV+L++FSS+G+L+EYS +S ++ ++RY + + ++ + E AKL+ ++ ++ + RN +GE L L+ KEL+++E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALVIFSSKGKLFEYSTDSCMEKILERYDRYLYSDKQLVGRDISQSENWVLEHAKLKARVEVLEKNKRNFMGEDLDSLSLKELQSLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSI (MADS-box transcription factor 14 OS=Oryza sativa subsp. indica GN=MADS14 PE=2 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 62/137 (45.26%), Postives = 94/137 (68.61%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK--------ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGK+++KRIENT NRQVTF KRR+GLLKKA E+SVLCDAEV+LI+FS++G+LY+Y+ +S + ++RY++ +A++ G+ C E KL+ ++ +Q ++++GE L LN KEL+ +E Sbjct: 1 MGRGKVQLKRIENTINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYKYATDSCMDKILERYERYSYAEKVLISAESDTQGNWC--------HEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: CAL_ARATH (Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL PE=1 SV=3) HSP 1 Score: 120.939 bits (302), Expect = 4.977e-27 Identity = 64/131 (48.85%), Postives = 94/131 (71.76%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK-ATADTSNTGSICEANAQF-YQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG++E+KRIEN NRQVTF KRR GLLKKA E+SVLCDAEVSLIVFS +G+L+EYS+ S ++ ++RY++ + A+ NAQ + E ++L+ +I ++ + R+ LGE L ++ K+L+N+E Sbjct: 1 MGRGRVELKRIENKINRQVTFSKRRTGLLKKAQEISVLCDAEVSLIVFSHKGKLFEYSSESCMEKVLERYERYSYAERQLIAPDSHVNAQTNWSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQNLE 131
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL15_ARATH (Agamous-like MADS-box protein AGL15 OS=Arabidopsis thaliana GN=AGL15 PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.500e-27 Identity = 66/128 (51.56%), Postives = 87/128 (67.97%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGKIEIKRIEN +RQVTF KRR+GLLKKA ELSVLCDAEV++IVFS G+L+EYS+ +K T+ RY N S + A+ E L+ Q+S +Q + + G+ L+ L FKEL+++E Sbjct: 1 MGRGKIEIKRIENANSRQVTFSKRRSGLLKKARELSVLCDAEVAVIVFSKSGKLFEYSSTGMKQTLSRY-------GNHQSSSASKAEEDCAEVDILKDQLSKLQEKHLQLQGKGLNPLTFKELQSLE 121
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD14_ORYSJ (MADS-box transcription factor 14 OS=Oryza sativa subsp. japonica GN=MADS14 PE=1 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 8.489e-27 Identity = 62/137 (45.26%), Postives = 93/137 (67.88%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKK--------ATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGK+++KRIEN NRQVTF KRR+GLLKKA E+SVLCDAEV+LI+FS++G+LYEY+ +S + ++RY++ +A++ G+ C E KL+ ++ +Q ++++GE L LN KEL+ +E Sbjct: 1 MGRGKVQLKRIENKINRQVTFSKRRSGLLKKANEISVLCDAEVALIIFSTKGKLYEYATDSCMDKILERYERYSYAEKVLISAESDTQGNWC--------HEYRKLKAKVETIQKCQKHLMGEDLESLNLKELQQLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL8_SOLLC (Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum GN=TDR4 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 59/129 (45.74%), Postives = 92/129 (71.32%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+N+S ++ ++RY++ + + + E KL+ ++ +Q + ++ +GE L L+ KEL+N+E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYANDSCMERILERYERYSFAEKQLVPTDHTSPVSWTLEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AGL8_SOLCO (Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii GN=SCM1 PE=2 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.109e-26 Identity = 60/129 (46.51%), Postives = 91/129 (70.54%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS-VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG++++KRIEN NRQVTF KRR+GLLKKA+E+SVLCDAEV LIVFS++G+L+EY+ +S ++ ++RY++ + + + E AKL+ ++ +Q + + +GE L LN KEL+N+E Sbjct: 1 MGRGRVQLKRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVGLIVFSTKGKLFEYATDSCMERLLERYERYSFAEKQLVPTDHTSPGSWTLENAKLKARLEVLQRNEKLYVGEDLESLNMKELQNLE 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD50_ORYSJ (MADS-box transcription factor 50 OS=Oryza sativa subsp. japonica GN=MADS50 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 1.891e-26 Identity = 61/130 (46.92%), Postives = 91/130 (70.00%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNMETR 611 M RGK ++KRIEN T+RQVTF KRRNGLLKKA+ELSVLCDAEV+LIVFS RG+LYE+++ S + TI+RY+ T + ++ + + + + +A L ++ ++ R +LGE L + +EL ++E + Sbjct: 1 MVRGKTQMKRIENPTSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFASASTQKTIERYRTYTKENIGNKTV-QQDIEQVKADADGLAKKLEALETYKRKLLGEKLDECSIEELHSLEVK 129
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD18_ORYSJ (MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica GN=MADS18 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.470e-26 Identity = 60/129 (46.51%), Postives = 91/129 (70.54%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY-SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG ++++RIEN NRQVTF KRRNGLLKKA+E+SVLCDA+V+LIVFS++G+LYE+ S++S++ ++RY++ + D + + + E L+ ++ +Q S R +LGE L L KEL+ +E Sbjct: 1 MGRGPVQLRRIENKINRQVTFSKRRNGLLKKAHEISVLCDADVALIVFSTKGKLYEFSSHSSMEGILERYQRYSFDERAVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLTIKELQQLE 129 The following BLAST results are available for this feature:
BLAST of CN188253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188253 ID=CN188253; Name=CN188253; organism=Citrus sinensis; type=EST; length=612bpback to top |