CN188253
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MADS1_PETHY (Floral homeotic protein PMADS 1 OS=Petunia hybrida GN=PMADS1 PE=2 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 7.436e-23 Identity = 58/129 (44.96%), Postives = 86/129 (66.67%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSV--KSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNM 602 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA EL+VLCDA+VS+I+ SS G+L+E+ + S+ K D Y+K + ++ + Q++ KL+ N++ R +GESL+ LN+++L+ + Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKANELTVLCDAKVSIIMISSTGKLHEFISPSITTKQLFDLYQKTVG-----VDLWNSHYEKMQEQLRKLKEVNRNLRKEIRQRMGESLNDLNYEQLEEL 124
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: JOIN_SOLLC (MADS-box protein JOINTLESS OS=Solanum lycopersicum GN=J PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22 Identity = 57/128 (44.53%), Postives = 81/128 (63.28%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 M R KI+IK+I+N+T RQVTF KRR GL KKA ELSVLCDA+V+LI+FSS G+L++YS++S+K ++R + + ++L +IS + R M GE L GLN +EL+ +E Sbjct: 1 MAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLE 128
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: GLOB_ANTMA (Floral homeotic protein GLOBOSA OS=Antirrhinum majus GN=GLO PE=1 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 1.268e-22 Identity = 56/130 (43.08%), Postives = 87/130 (66.92%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNS--VKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGKIEIKRIEN++NRQVT+ KRRNG++KKA E+SVLCDA VS+I+F+S G+++E+ + S + +D Y K + + + + E +++ + +MQ R++ GE ++ LN+KEL +E Sbjct: 1 MGRGKIEIKRIENSSNRQVTYSKRRNGIMKKAKEISVLCDAHVSVIIFASSGKMHEFCSPSTTLVDMLDHYHKLSGK-----RLWDPKHEHLDNEINRVKKENDSMQIELRHLKGEDITTLNYKELMVLE 125
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: DEFA_ANTMA (Floral homeotic protein DEFICIENS OS=Antirrhinum majus GN=DEFA PE=1 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.657e-22 Identity = 58/129 (44.96%), Postives = 83/129 (64.34%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNM 602 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+ELSVLCDA+VS+I+ SS +L+EY + K D+Y+KA + ++ + Q+ KL N++ R +GESL+ L ++++ N+ Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELSVLCDAKVSIIMISSTQKLHEYISPTTATKQLFDQYQKAVG-----VDLWSSHYEKMQEHLKKLNEVNRNLRREIRQRMGESLNDLGYEQIVNL 124
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: AP3_ARATH (Floral homeotic protein APETALA 3 OS=Arabidopsis thaliana GN=AP3 PE=1 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 2.826e-22 Identity = 59/130 (45.38%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEY--SNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 M RGKI+IKRIEN TNRQVT+ KRRNGL KKA+EL+VLCDA VS+I+FSS +L+EY N + K +D Y+ T + + + Q+ KL N++ + LGE L L+ +EL+ +E Sbjct: 1 MARGKIQIKRIENQTNRQVTYSKRRNGLFKKAHELTVLCDARVSIIMFSSSNKLHEYISPNTTTKEIVDLYQ-----TISDVDVWATQYERMQETKRKLLETNRNLRTQIKQRLGECLDELDIQELRRLE 125
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: M17_MAIZE (MADS-box protein ZMM17 OS=Zea mays GN=M17 PE=2 SV=1) HSP 1 Score: 104.375 bits (259), Expect = 4.820e-22 Identity = 58/130 (44.62%), Postives = 86/130 (66.15%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGKIEIKRIEN+TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S++ I++Y+ AT S+ I + Q E +++ ++ ++ R G+ LS L ++ ++E Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPACSLRELIEQYQHAT--NSHFEEI--NHDQQILLEMTRMKNEMEKLETGIRRYTGDDLSSLTLDDVSDLE 126
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD31_ORYSJ (MADS-box transcription factor 31 OS=Oryza sativa subsp. japonica GN=MADS31 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 54/130 (41.54%), Postives = 84/130 (64.62%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRG++E+K+IEN TNRQVTF KRR GLLKKA EL++LCDA++ +IVFS G++YEYS+ + + DRY KA + + Q QE +++ + + ++ R +G+ L+ L +++ N+E Sbjct: 1 MGRGRVELKKIENPTNRQVTFSKRRMGLLKKANELAILCDAQIGVIVFSGTGKMYEYSSPPWRIANIFDRYLKAPSTRFEEMDV----QQRIIQEMTRMKDENNRLRIIMRQYMGDDLASLTLQDVSNLE 126
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MAD29_ORYSJ (MADS-box transcription factor 29 OS=Oryza sativa subsp. japonica GN=MADS29 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 6.295e-22 Identity = 58/130 (44.62%), Postives = 81/130 (62.31%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNN--SVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGKIEIKRIEN TNRQVTF KRR GLLKKA EL+VLCDA V +++FSS G+++EY + S++ I+ Y+ T NT + Q E ++R ++ + R G+ LS L ++ ++E Sbjct: 1 MGRGKIEIKRIENATNRQVTFSKRRGGLLKKANELAVLCDARVGVVIFSSTGKMFEYCSPTCSLRELIEHYQTVT----NTHFEEINHDQQIFVEMTRMRNEMEKLDGGIRRFTGDDLSNLTLADINDLE 126
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: SVP_ARATH (MADS-box protein SVP OS=Arabidopsis thaliana GN=SVP PE=1 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 8.222e-22 Identity = 53/128 (41.41%), Postives = 82/128 (64.06%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATADTSNTGSICEANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 M R KI+I++I+N T RQVTF KRR GL KKA ELSVLCDA+V+LI+FSS G+L+E+ ++S+K ++R+ + + + A++ +I++ + R M GE L GL+ +EL+ +E Sbjct: 1 MAREKIQIRKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFEFCSSSMKEVLERHNLQSKNLEKLDQPSLELQLVENSDHARMSKEIADKSHRLRQMRGEELQGLDIEELQQLE 128
BLAST of CN188253 vs. ExPASy Swiss-Prot
Match: MADS4_ORYSJ (MADS-box transcription factor 4 OS=Oryza sativa subsp. japonica GN=MADS4 PE=1 SV=3) HSP 1 Score: 102.834 bits (255), Expect = 1.402e-21 Identity = 60/130 (46.15%), Postives = 80/130 (61.54%), Query Frame = 3 Query: 222 MGRGKIEIKRIENTTNRQVTFCKRRNGLLKKAYELSVLCDAEVSLIVFSSRGRLYEYSNNSVKSTIDRYKKATAD-TSNTGSIC-EANAQFYQQEAAKLRIQISNMQNSNRNMLGESLSGLNFKELKNME 605 MGRGKIEIKRIEN+TNRQVTF KRR G+LKKA E+ VLCDAEV +++FSS G+L +Y S + +N+G I + + E +++ + NMQ R+M GE L+ L KEL +E Sbjct: 1 MGRGKIEIKRIENSTNRQVTFSKRRAGILKKAREIGVLCDAEVGVVIFSSAGKLSDYCTPKTTSVFPPLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHMKGEDLNSLQPKELIAIE 130 The following BLAST results are available for this feature:
BLAST of CN188253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 121
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188253 ID=CN188253; Name=CN188253; organism=Citrus sinensis; type=EST; length=612bpback to top |