CN188250
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188250 vs. ExPASy Swiss-Prot
Match: HSP21_SOYBN (17.9 kDa class II heat shock protein OS=Glycine max GN=HSP17.9-D PE=3 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.920e-12 Identity = 34/87 (39.08%), Postives = 56/87 (64.37%), Query Frame = -3 Query: 306 DWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 566 D KE P ++VF+ D+PGL+ + +L I GER +++E++ K+ R+ER GK +R+F LP+NA + + A ++GVL+VT Sbjct: 53 DVKEYPNSYVFEIDMPGLKSGDIKVQVEDDNLLLICGERKRDEEKEGAKYLRMERRVGKLMRKFVLPENANTDAISAVCQDGVLSVT 139
BLAST of CN188250 vs. ExPASy Swiss-Prot
Match: HSP16_ORYSJ (16.0 kDa heat shock protein, peroxisomal OS=Oryza sativa subsp. japonica GN=HSP16.0 PE=2 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 2.507e-12 Identity = 40/100 (40.00%), Postives = 56/100 (56.00%), Query Frame = -3 Query: 309 SQFANARIDWKETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGER-----SKEQE-EKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTV 590 S A A +DW ETP +HV + ++PGL +G +L + G KE+E EK+ WH ER +F R LP +VEQ++AS++NGVLTV Sbjct: 25 SASATAAMDWVETPTSHVLRINVPGLGKDDVKVQVEDGNVLTVRGAAPHAAAEKEREREKDVVWHVAERGRPEFAREVALPAEVRVEQIRASVDNGVLTV 124
BLAST of CN188250 vs. ExPASy Swiss-Prot
Match: HS177_ARATH (17.7 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.7 PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 5.585e-12 Identity = 34/85 (40.00%), Postives = 54/85 (63.53%), Query Frame = -3 Query: 306 ETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 557 E P A+VF D+PG++ +L +SG+R ++ +E K+ R+ER GKF+R+F+LPDNA +E++ A+ +GVL VT Sbjct: 52 EHPDAYVFAVDMPGIKGDEIQVQIENENVLVVSGKRQRDNKENEGVKFVRMERRMGKFMRKFQLPDNADLEKISAACNDGVLKVT 136
BLAST of CN188250 vs. ExPASy Swiss-Prot
Match: SP21_STIAU (Spore protein SP21 OS=Stigmatella aurantiaca GN=hspA PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 32/85 (37.65%), Postives = 55/85 (64.71%), Query Frame = -3 Query: 306 KETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKNDKWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 560 +ET +A++FKADLPG+ R+ +SG+R +E+ E++++++ ER+ G F R F LP+ + V+A ++NGVLT+T Sbjct: 59 RETKEAYIFKADLPGVDEKDIEVTLTGDRV-SVSGKREREKREESERFYAYERTFGSFSRAFTLPEGVDGDNVRADLKNGVLTLT 142
BLAST of CN188250 vs. ExPASy Swiss-Prot
Match: HS176_ARATH (17.6 kDa class II heat shock protein OS=Arabidopsis thaliana GN=HSP17.6 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 2.772e-11 Identity = 33/85 (38.82%), Postives = 52/85 (61.18%), Query Frame = -3 Query: 306 ETPQAHVFKADLPGLRXXXXXXXXXEGRILQISGERSKEQEEKND-KWHRVERSSGKFLRRFRLPDNAKVEQVKASMENGVLTVT 557 E P A+ F D+PG++ +L +SGER +E +E K+ R+ER GKF+R+F+LP+NA ++++ A +GVL VT Sbjct: 51 EHPNAYAFVVDMPGIKGDEIKVQVENDNVLVVSGERQRENKENEGVKYVRMERRMGKFMRKFQLPENADLDKISAVCHDGVLKVT 135 The following BLAST results are available for this feature:
BLAST of CN188250 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188250 ID=CN188250; Name=CN188250; organism=Citrus sinensis; type=EST; length=598bpback to top |