CK939539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RIC2_ORYSJ (Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2 PE=2 SV=2) HSP 1 Score: 171.4 bits (433), Expect = 3.371e-42 Identity = 81/147 (55.10%), Postives = 103/147 (70.07%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D K +K QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +ML+GNK DL H AV T+EG+ FA+ L FME S Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVQTDEGKAFAERESLYFMETS 157
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11D_TOBAC (Ras-related protein Rab11D OS=Nicotiana tabacum GN=RAB11D PE=2 SV=1) HSP 1 Score: 171.014 bits (432), Expect = 4.403e-42 Identity = 79/145 (54.48%), Postives = 107/145 (73.79%), Query Frame = 1 Query: 193 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y+FK ++IGD+ VGKS +L +F F TIGVEF R + I +K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R HA+ N+ IMLIGNK DL +RAV TE+ ++FA++ GL F+E S Sbjct: 14 YVFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLAIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLIGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETS 158
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RGP2_ORYSJ (Ras-related protein RGP2 OS=Oryza sativa subsp. japonica GN=RGP2 PE=2 SV=2) HSP 1 Score: 170.629 bits (431), Expect = 5.750e-42 Identity = 79/147 (53.74%), Postives = 110/147 (74.83%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y+YLFK ++IGD+GVGKS +L +FT F TIGVEF + + ++ K IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R++F+++ WL + R HA++++ IM++GNK DL H RAVS +EG+ A++ GL F+E S Sbjct: 9 YSYLFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQSFDNVHRWLRELRDHADSSIVIMMVGNKSDLIHLRAVSEDEGKALAEKEGLFFLETS 155
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_TOBAC (Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.750e-42 Identity = 82/147 (55.78%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +F+ F TIGVEF R I +D+K +K QIWDTAGQE +R+IT +YYRGA GAL+VYDITR TF ++ WL++ R H + N+ IML+GNK DL H RAVSTE+ + FA+ FME S Sbjct: 11 YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKADLRHLRAVSTEDAKAFAERENTFFMETS 157
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAA2C_ARATH (Ras-related protein RABA2c OS=Arabidopsis thaliana GN=RABA2C PE=2 SV=4) HSP 1 Score: 170.629 bits (431), Expect = 5.750e-42 Identity = 80/155 (51.61%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 163 LINQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 + ++ + Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R ++ K IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA++N+ IM+ GNK DL H R+V+ E+G+ A++ GL F+E S Sbjct: 1 MTHRVDQEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTTQVEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVLRWLRELRDHADSNIVIMMAGNKSDLNHLRSVAEEDGQSLAEKEGLSFLETS 155
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAA2A_ARATH (Ras-related protein RABA2a OS=Arabidopsis thaliana GN=RABA2A PE=2 SV=1) HSP 1 Score: 170.629 bits (431), Expect = 5.750e-42 Identity = 80/147 (54.42%), Postives = 109/147 (74.15%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++ + +K QIWDTAGQE +R+IT +YYRGA GALLVYD+T+ TF +++ WL++ R HA++N+ IMLIGNK DL H RAV+TE+ + +A++ GL F+E S Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTDLKHLRAVATEDAQSYAEKEGLSFIETS 155
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAA1A_ARATH (Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=2 SV=1) HSP 1 Score: 170.244 bits (430), Expect = 7.510e-42 Identity = 81/147 (55.10%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF + ++ K +K QIWDTAGQE +R+IT +YYRGA GALL+YD+TR TF + A WL + R H + N+ +MLIGNKCDL H AV TEE + FA+ L FME S Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDTAGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCDLRHLVAVKTEEAKAFAERESLYFMETS 156
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: YPTC6_CHLRE (Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6 PE=3 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.809e-42 Identity = 83/147 (56.46%), Postives = 103/147 (70.07%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA++N+ IML+GNK DL H R V TE + F + GL F+E S Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSDLKHLRDVQTEVAQAFCEREGLSFIETS 155
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11E_LOTJA (Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1) HSP 1 Score: 169.859 bits (429), Expect = 9.809e-42 Identity = 83/147 (56.46%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF + + ID K IK QIWDTAGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H + N+ +MLIGNK DL H VSTE+G+ FA++ L FME S Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSDLRHLVTVSTEDGKAFAEKESLYFMETS 156
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RYL1_YARLI (Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica GN=RYL1 PE=3 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41 Identity = 76/154 (49.35%), Postives = 113/154 (73.38%), Query Frame = 1 Query: 166 INQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 ++ + +Y L K ++IGD+GVGKSCLLL+F + +F P TIG++F R I I N+ +KLQ+WDTAGQE FR+IT +YYRGA G LLVYD+T ++FN++ +W ++ + +AN + ++L+GNKCDL +R VSTE+G+ A + G+ F+EAS Sbjct: 1 MSHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIENWYQNVQSYANEGVELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEAS 154 The following BLAST results are available for this feature:
BLAST of CK939539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939539 ID=CK939539; Name=CK939539; organism=Citrus sinensis; type=EST; length=628bpback to top |