CK939539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_RAT (Ras-related protein Rab-11B OS=Rattus norvegicus GN=Rab11b PE=2 SV=4) HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA++N+ IML+GNK DL H RAV T+E FA+++ L F+E S Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_MOUSE (Ras-related protein Rab-11B OS=Mus musculus GN=Rab11b PE=1 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA++N+ IML+GNK DL H RAV T+E FA+++ L F+E S Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_HUMAN (Ras-related protein Rab-11B OS=Homo sapiens GN=RAB11B PE=1 SV=4) HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA++N+ IML+GNK DL H RAV T+E FA+++ L F+E S Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_BOVIN (Ras-related protein Rab-11B OS=Bos taurus GN=RAB11B PE=2 SV=3) HSP 1 Score: 169.474 bits (428), Expect = 1.281e-41 Identity = 82/147 (55.78%), Postives = 105/147 (71.43%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA++N+ IML+GNK DL H RAV T+E FA+++ L F+E S Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: YPT2_SCHPO (GTP-binding protein ypt2 OS=Schizosaccharomyces pombe GN=ypt2 PE=2 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.673e-41 Identity = 80/148 (54.05%), Postives = 109/148 (73.65%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 SY YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G LL+YD+T +++F+++ +W + QHA+ N+ +LIGNKCD +R VS E+G+ A E G+ F+EAS Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKCDCEDQRQVSFEQGQALADELGVKFLEAS 152
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1 PE=2 SV=2) HSP 1 Score: 169.088 bits (427), Expect = 1.673e-41 Identity = 81/150 (54.00%), Postives = 107/150 (71.33%), Query Frame = 1 Query: 178 NMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 N Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + D K IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N+ +L+GNKCDLA R VS E G+ A E G+ F+E S Sbjct: 2 NPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDLAENRVVSYEAGKALADEIGIPFLETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB4_DICDI (Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3 SV=1) HSP 1 Score: 169.088 bits (427), Expect = 1.673e-41 Identity = 78/145 (53.79%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 193 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 YL K+IIIG VGKSCLL +F D +F+ TIGV+F +R++ I K +KLQIWDTAGQE FRS+ SYYRG+AG LVYD+T RE++NH+ +WL D + A+ ++TI+L+GNK DL +R V+ E + A+E+GL+FME S Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAGQERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLTEQREVTFLEASRIAQENGLLFMETS 150
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11C_LOTJA (Ras-related protein Rab11C OS=Lotus japonicus GN=RAB11C PE=2 SV=1) HSP 1 Score: 168.703 bits (426), Expect = 2.185e-41 Identity = 79/155 (50.97%), Postives = 111/155 (71.61%), Query Frame = 1 Query: 163 LINQTNMSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 + ++ + Y YLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++ K +K QIWDTAGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA++N+ IM+ GNK DL H RAVS ++G +++ GL F+E S Sbjct: 1 MAHRVDHEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSDLNHLRAVSEDDGGALSEKEGLSFLETS 155
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11B_DISOM (Ras-related protein Rab-11B OS=Discopyge ommata PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 82/147 (55.78%), Postives = 104/147 (70.75%), Query Frame = 1 Query: 187 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDTAGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA+ N+ IML+GNK DL H RAV T+E FA+++ L F+E S Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNNLSFIETS 154
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8B_BOVIN (Ras-related protein Rab-8B OS=Bos taurus GN=RAB8B PE=2 SV=1) HSP 1 Score: 168.318 bits (425), Expect = 2.854e-41 Identity = 75/148 (50.68%), Postives = 111/148 (75.00%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+CLL +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA++++ M++GNKCD+ +R VS E GE+ A ++G+ F+EAS Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLEAS 151 The following BLAST results are available for this feature:
BLAST of CK939539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939539 ID=CK939539; Name=CK939539; organism=Citrus sinensis; type=EST; length=628bpback to top |