CK939539
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RB11C_TOBAC (Ras-related protein Rab11C OS=Nicotiana tabacum GN=RAB11C PE=2 SV=1) HSP 1 Score: 167.933 bits (424), Expect = 3.727e-41 Identity = 77/145 (53.10%), Postives = 106/145 (73.10%), Query Frame = 1 Query: 193 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 Y+FK ++IGD+ VGK+ +L +F F TIGVEF R + I +K +K QIWDTAGQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R HA+ N+ IML GNK DL +RAV TE+ ++FA++ GL F+E S Sbjct: 14 YVFKVVLIGDSAVGKTQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHIPRWLEELRAHADRNIVIMLTGNKTDLEDQRAVPTEDAKEFAQKEGLFFLETS 158
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_RAT (Ras-related protein Rab-8A OS=Rattus norvegicus GN=Rab8a PE=2 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_MOUSE (Ras-related protein Rab-8A OS=Mus musculus GN=Rab8a PE=1 SV=2) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_MACFA (Ras-related protein Rab-8A OS=Macaca fascicularis GN=RAB8A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_HUMAN (Ras-related protein Rab-8A OS=Homo sapiens GN=RAB8A PE=1 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_DICDI (Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A PE=3 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 76/148 (51.35%), Postives = 107/148 (72.30%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I ++ K IKLQIWDTAGQE FR+IT +YYRGA G LLVYD+T ++F ++ +W+ + QHA ++ MLIGNKCD+A ++ V + G+ A E+G+ F+E S Sbjct: 11 AYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETS 158
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_CANFA (Ras-related protein Rab-8A OS=Canis familiaris GN=RAB8A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8A_BOVIN (Ras-related protein Rab-8A OS=Bos taurus GN=RAB8A PE=2 SV=1) HSP 1 Score: 167.548 bits (423), Expect = 4.868e-41 Identity = 75/148 (50.68%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+A++ M++GNKCD+ +R VS E GE+ A ++G+ FME S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVNDKRQVSKERGEKLALDYGIKFMETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8B_RAT (Ras-related protein Rab-8B OS=Rattus norvegicus GN=Rab8b PE=1 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41 Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+CLL +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA++++ M++GNKCD+ +R VS E GE+ A ++G+ F+E S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151
BLAST of CK939539 vs. ExPASy Swiss-Prot
Match: RAB8B_PONAB (Ras-related protein Rab-8B OS=Pongo abelii GN=RAB8B PE=2 SV=1) HSP 1 Score: 166.777 bits (421), Expect = 8.304e-41 Identity = 74/148 (50.00%), Postives = 110/148 (74.32%), Query Frame = 1 Query: 184 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEAS 627 +Y YLFK ++IGD+GVGK+CLL +F++ F TIG++F R I +D K IKLQIWDTAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA++++ M++GNKCD+ +R VS E GE+ A ++G+ F+E S Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKCDMNDKRQVSKERGEKLAIDYGIKFLETS 151 The following BLAST results are available for this feature:
BLAST of CK939539 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939539 ID=CK939539; Name=CK939539; organism=Citrus sinensis; type=EST; length=628bpback to top |