EY666020
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_ORYSJ (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Oryza sativa subsp. japonica GN=RCA PE=1 SV=2) HSP 1 Score: 271.937 bits (694), Expect = 1.685e-76 Identity = 141/192 (73.44%), Postives = 158/192 (82.29%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSAS---FKITA-EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 GA S P++ F G LKK + S++ FK+ A E+DE KQT +DRWKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLRTY+ DNTM G YIAPAFMDKLVVHI+KNFM+LPNIKVPLILGIWGGKGQGKSF CELVFAKMGINPIMM+AGELESGNAGEPA +IRQ+ Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSNINRFKVMAKELDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVLSSYEYLSQGLRTYDFDNTMGGFYIAPAFMDKLVVHISKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQR 200 HSP 2 Score: 29.261 bits (64), Expect = 1.685e-76 Identity = 19/45 (42.22%), Postives = 22/45 (48.89%), Query Frame = 2 Query: 722 RKGKWACLLINES*CQDWARWGGTPPKTRNTQMGYPPPLNIA*KP 856 +KGK CL IN+ R GGT T N QM +NIA P Sbjct: 209 KKGKMCCLFINDLDAGA-GRMGGTTQYTVNNQMVNATLMNIADNP 252 HSP 3 Score: 28.4906 bits (62), Expect = 1.685e-76 Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K +R REAAD+IKKGKM Sbjct: 193 PAKLIRQRYREAADIIKKGKM 213
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_MAIZE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Zea mays GN=RCA1 PE=2 SV=3) HSP 1 Score: 268.855 bits (686), Expect = 8.238e-76 Identity = 141/196 (71.94%), Postives = 157/196 (80.10%), Query Frame = 3 Query: 132 GAATSVPS-SSFFGTSLKK--VSSRIP---PSKVPSASFKITA--EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 GA S P+ SSF G L K VS+ + S ++ FK A EVDE KQT +DRWKGLAYD SDDQQDITRGKG VD+LFQAPMG GTH AV+SSYDYISQG ++YN DN MDG YIA FMDKLVVH++KNFM+LPNIKVPLILGIWGGKGQGKSF CELVFAKMGI PIMM+AGELESGNAGEPA +IRQ+ Sbjct: 10 GAPASTPTRSSFLGKKLNKPQVSAAVTYHGKSSSSNSRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVLSSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLIRQR 205 HSP 2 Score: 30.4166 bits (67), Expect = 8.238e-76 Identity = 20/47 (42.55%), Postives = 24/47 (51.06%), Query Frame = 2 Query: 716 LSRKGKWACLLINES*CQDWARWGGTPPKTRNTQMGYPPPLNIA*KP 856 L +KGK +CL IN+ R GGT T N QM +NIA P Sbjct: 212 LIKKGKMSCLFINDL-DAGAGRMGGTTQYTVNNQMVNATLMNIADNP 257 HSP 3 Score: 28.1054 bits (61), Expect = 8.238e-76 Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K +R REA+DLIKKGKM Sbjct: 198 PAKLIRQRYREASDLIKKGKM 218
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCAA_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase A, chloroplastic OS=Hordeum vulgare GN=RCAA PE=2 SV=1) HSP 1 Score: 259.996 bits (663), Expect = 7.934e-73 Identity = 134/191 (70.16%), Postives = 153/191 (80.10%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKK-VSSRIPPSKVPSASFKITAEVDENKQTKK--DRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 GA S P++ F G LKK V+S + S + + T EN K+ D+WKGLAYD SDDQQDITRGKG VDSLFQAP G GTH AV+SSY+Y+SQGLR Y+ DNTM G YIAPAFMDKLVVH++KNFM+LPNIK+PLILGIWGGKGQGKSF CELVFAKMGINPIMM+AGELESGNAGEPA +IRQ+ Sbjct: 10 GAPASTPTN-FLGKKLKKQVTSAVNYHGKSSKANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSKNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQR 199 HSP 2 Score: 28.8758 bits (63), Expect = 7.934e-73 Identity = 19/45 (42.22%), Postives = 22/45 (48.89%), Query Frame = 2 Query: 722 RKGKWACLLINES*CQDWARWGGTPPKTRNTQMGYPPPLNIA*KP 856 +KGK CL IN+ R GGT T N QM +NIA P Sbjct: 208 KKGKMCCLFINDLDAGA-GRMGGTTQYTVNNQMVNATLMNIADAP 251 HSP 3 Score: 28.4906 bits (62), Expect = 7.934e-73 Identity = 14/21 (66.67%), Postives = 16/21 (76.19%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K +R REAAD+IKKGKM Sbjct: 192 PAKLIRQRYREAADMIKKGKM 212
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCAB_HORVU (Ribulose bisphosphate carboxylase/oxygenase activase B, chloroplastic OS=Hordeum vulgare GN=RCAB PE=2 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 1.035e-72 Identity = 136/191 (71.20%), Postives = 154/191 (80.63%), Query Frame = 3 Query: 132 GAATSVPSSSFFGTSLKKVSSRIPPSKVPSASFKITA---EVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 GA S P+ F G +K +K+ S ++ A E+D+ KQT DRWKGLAYD SDDQQDITRGKG VDSLFQAPMG GTH A++SSY+YISQGLR Y+ DNTMDGLYIAPAFMDKL+VH+ KNFM+LPNIKVPLILGIWGGKGQGKSF CELVFAKMGINPIMM+AGELESGN GEPA +IRQ+ Sbjct: 10 GAPASTPTI-FLGKKVKNYYHG--GNKMKSRVVRVMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSYEYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAKNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLIRQR 196 HSP 2 Score: 28.1054 bits (61), Expect = 1.035e-72 Identity = 19/44 (43.18%), Postives = 21/44 (47.73%), Query Frame = 2 Query: 725 KGKWACLLINES*CQDWARWGGTPPKTRNTQMGYPPPLNIA*KP 856 KGK CL IN+ R GGT T N QM +NIA P Sbjct: 206 KGKMCCLFINDLDAGA-GRMGGTTQYTVNNQMVNATLMNIADAP 248 HSP 3 Score: 26.5646 bits (57), Expect = 1.035e-72 Identity = 13/21 (61.90%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K +R REAAD+I KGKM Sbjct: 189 PAKLIRQRYREAADIINKGKM 209
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_SPIOL (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Spinacia oleracea PE=1 SV=2) HSP 1 Score: 256.914 bits (655), Expect = 2.652e-70 Identity = 129/200 (64.50%), Postives = 154/200 (77.00%), Query Frame = 3 Query: 99 AAAVPLSFNGSGAATSVPSSSFFGTSLKKVSS-RIPPSKVPSASFKITAEVDENKQTKKDRWKGLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 A PL+ NGS A SVP+S F G+SLKK ++ R P S S + +T + EN++ D+W LA D SDDQ DI RGKG VDSLFQAP GTH + SS++Y SQGLR Y++DN + YIAPAFMDKLVVHITKNF++LPNIK+PLILG+WGGKGQGKSF CELVFAK+GINPIMM+AGELESGNAGEPA +IRQ+ Sbjct: 11 ATRAPLNLNGSSAGASVPTSGFLGSSLKKHTNVRFPSS---SRTTSMTVKAAENEEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQSSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITKNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLIRQR 207 HSP 2 Score: 26.9498 bits (58), Expect = 2.652e-70 Identity = 14/21 (66.67%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K +R REAADLI KGKM Sbjct: 200 PAKLIRQRYREAADLIAKGKM 220 HSP 3 Score: 25.0238 bits (53), Expect = 2.652e-70 Identity = 19/47 (40.43%), Postives = 21/47 (44.68%), Query Frame = 2 Query: 716 LSRKGKWACLLINES*CQDWARWGGTPPKTRNTQMGYPPPLNIA*KP 856 L KGK L IN+ R GGT T N QM +NIA P Sbjct: 214 LIAKGKMCALFINDLE-PGAGRMGGTTQYTVNNQMVNATLMNIADNP 259
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_CHLRE (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic OS=Chlamydomonas reinhardtii PE=2 SV=1) HSP 1 Score: 179.489 bits (454), Expect = 1.517e-45 Identity = 93/171 (54.39%), Postives = 118/171 (69.01%), Query Frame = 3 Query: 192 SRIPPSKVPSASFKITAEVDENKQTKKDRWKGL--AYDESDDQQDITRGKGAVDSLFQAPMGTG-THYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIRQK 695 +R+ V A ++ A + + RW+ + D SDDQQDITRG+ VD LFQ G G TH AV+SS +Y+SQ ++N N DG YI+PAF+DK+ +HI KNFM LP IKVPLILGIWGGKGQGK+F C L + K+GI PI+M+AGELESGNAGEPA +IR + Sbjct: 18 ARVATRSVRRAQLQVVAP----SRKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQSRASFN--NIEDGFYISPAFLDKMTIHIAKNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLIRTR 182 HSP 2 Score: 25.409 bits (54), Expect = 1.517e-45 Identity = 12/21 (57.14%), Postives = 15/21 (71.43%), Query Frame = 1 Query: 673 PLK*SGRRDREAADLIKKGKM 735 P K R REA+D+IKKG+M Sbjct: 175 PAKLIRTRYREASDIIKKGRM 195
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_ARAHY (Ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic (Fragments) OS=Arachis hypogaea GN=RCA PE=1 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.940e-26 Identity = 73/131 (55.73%), Postives = 75/131 (57.25%), Query Frame = 3 Query: 285 GLAYDESDDQQDITRGKGAVDSLFQAPMGTGTHYAVMSSYDYISQGLRTYNLDNTMDGLYIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA 677 GLAYD SDDQQDITRG VDSLFQAPM GTHYAVMSSY+YISQGLR VPLILGIWGG KMGINPIMM+AGELESGNAGEPA Sbjct: 1 GLAYDISDDQQDITRGM--VDSLFQAPMNDGTHYAVMSSYEYISQGLR------------------------------------VPLILGIWGG--------------KMGINPIMMSAGELESGNAGEPA 79
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_ANASC (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain CA / ATCC 33047) GN=rca PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 5.204e-22 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 462 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIR 689 YIAP F+DKL VHITKNF++LP ++VPLILGI G KG+GK+F CEL F KMG+ +++ GELES +AG+PA +IR Sbjct: 4 YIAPRFLDKLAVHITKNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLIR 79
BLAST of EY666020 vs. ExPASy Swiss-Prot
Match: RCA_ANASP (Ribulose bisphosphate carboxylase/oxygenase activase OS=Anabaena sp. (strain PCC 7120) GN=rca PE=3 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 6.796e-22 Identity = 48/76 (63.16%), Postives = 62/76 (81.58%), Query Frame = 3 Query: 462 YIAPAFMDKLVVHITKNFMSLPNIKVPLILGIWGGKGQGKSFPCELVFAKMGINPIMMNAGELESGNAGEPA*VIR 689 YIAP F+DKL VHITKNF+++P ++VPLILGI G KG+GK+F CEL F KMGI +++ GELES +AG+PA +IR Sbjct: 4 YIAPRFLDKLAVHITKNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLIR 79 The following BLAST results are available for this feature:
BLAST of EY666020 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 19
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Sequences
The
following sequences are available for this feature:
EST sequence >EY666020 ID=EY666020; Name=EY666020; organism=Citrus sinensis; type=EST; length=871bpback to top |