CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SYNS3 (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9311) GN=frr PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.228e-32 Identity = 61/112 (54.46%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D++A M ++++ + NFN++RTGR+NP++LD+I VEYYG+ LKS+A ++TPDS ++ +QP+D SL IEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ AK Sbjct: 5 DLEANMRKSVEATQRNFNTIRTGRANPSLLDRINVEYYGADTPLKSLASLSTPDSQTIAVQPFDMGSLALIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLAAK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_PROMT (Ribosome-recycling factor OS=Prochlorococcus marinus (strain NATL2A) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31 Identity = 62/112 (55.36%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 ++K M ++I+ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++ IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K Sbjct: 5 ELKTTMSKSIEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIAIQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_NOSP7 (Ribosome-recycling factor OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=frr PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.357e-31 Identity = 61/112 (54.46%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D K++M+ +++ + FN++RTGR+N ++LDK+ V+YYGSP LKS+A I+TPD+S++LIQPY++++L IEKAI SD+G+TP+NDG VIRL +P LTS+RRKE K+ K Sbjct: 5 DAKSKMQSSVESTQRAFNTIRTGRANASLLDKVLVDYYGSPTPLKSLANISTPDASTILIQPYERNTLNIIEKAISLSDVGLTPSNDGSVIRLNIPPLTSDRRKEFVKMATK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_TRIEI (Ribosome-recycling factor OS=Trichodesmium erythraeum (strain IMS101) GN=frr PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31 Identity = 62/112 (55.36%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 + + +M++ I+ + +FN+VRTGR+N ++LD++ VEYYGSP LKS+A I PD+S++ IQPYDK+SL IEKAI SD+G+TPNNDG +IRL +P LT+ERR+E+ K AK Sbjct: 5 EAEEKMQKAIEATKNSFNTVRTGRANASLLDRVMVEYYGSPTQLKSMANIGIPDASTITIQPYDKTSLGLIEKAINMSDVGLTPNNDGSIIRLNIPALTAERRQEMVKKTAK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SYNY3 (Ribosome-recycling factor OS=Synechocystis sp. (strain PCC 6803) GN=frr PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31 Identity = 62/112 (55.36%), Postives = 90/112 (80.36%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 ++K M+++++ + +FN++RTGR+N ++LD+I VEYYG+ LKS+A I TPD+S+++IQP+D S+ +IEKAI SDLG+TPNNDG+VIRL +P LT+ERRKEL KV K Sbjct: 5 ELKDHMQKSVEATQRSFNTIRTGRANASLLDRITVEYYGAETPLKSLATIGTPDASTIVIQPFDMGSIGTIEKAISLSDLGLTPNNDGKVIRLNIPPLTAERRKELVKVAGK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CYAP4 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=frr PE=3 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 1.773e-31 Identity = 62/112 (55.36%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 DV+ M+++++ + FN++RTGR+N ++LD++ VEYYG+ L+S+A I+TPDSS++ IQP+D++SL IEKAI SDLG+TPNNDG VIRL +P LTS+RRKEL K +K Sbjct: 5 DVEDHMQKSVEATQRAFNTIRTGRANTSLLDRVTVEYYGAETPLRSLANISTPDSSTIAIQPFDRNSLNLIEKAISMSDLGLTPNNDGTVIRLNIPPLTSDRRKELVKTASK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_PROM1 (Ribosome-recycling factor OS=Prochlorococcus marinus (strain NATL1A) GN=frr PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.024e-31 Identity = 61/112 (54.46%), Postives = 86/112 (76.79%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 ++K M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A I TPDS ++ IQP+D SL SIEKAI +SDLG TPNNDG++IR+ +P LT ERRKE K+ +K Sbjct: 5 ELKNTMSKSVEAAQRNFNTIRTGRANTSLLDRISVEYYGAETPLKSLATITTPDSQTIAIQPFDLGSLASIEKAIATSDLGFTPNNDGKIIRINVPPLTEERRKEFCKLASK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CYAP7 (Ribosome-recycling factor OS=Cyanothece sp. (strain PCC 7424) GN=frr PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 3.949e-31 Identity = 60/112 (53.57%), Postives = 89/112 (79.46%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +V+ M++TI+ + +FN++RTGR+N A+LD++ V+YYG+ LKS+A I TPD++++ IQPYD+ S+ IEKAI SD+G+TPNNDG++IRL +P LT+ERRKEL K+ K Sbjct: 5 EVQDNMQKTIESTQRSFNTIRTGRANSALLDRVMVDYYGTETPLKSLANITTPDATTIAIQPYDRGSMGQIEKAIQLSDIGLTPNNDGQMIRLNIPPLTTERRKELVKLAGK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SYNSC (Ribosome-recycling factor OS=Synechococcus sp. (strain CC9605) GN=frr PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31 Identity = 60/112 (53.57%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K Sbjct: 5 DLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASK 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SYNPX (Ribosome-recycling factor OS=Synechococcus sp. (strain WH8102) GN=frr PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 5.157e-31 Identity = 60/112 (53.57%), Postives = 88/112 (78.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D++A M ++++ + NFN++RTGR+N ++LD+I VEYYG+ LKS+A ++TPDS ++ IQP+D S+L SIEKAI S+LG TPNNDG++IR+ +P LT ERRKE K+ +K Sbjct: 5 DLEASMRKSVEATQRNFNTIRTGRANSSLLDRISVEYYGAETPLKSLATLSTPDSQTIQIQPFDISALASIEKAIAMSELGFTPNNDGKIIRINVPPLTEERRKEFCKLASK 116 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |