CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STRS7 (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain H70) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STREM (Ribosome-recycling factor OS=Streptococcus equi subsp. zooepidemicus (strain MGCS10565) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STRE4 (Ribosome-recycling factor OS=Streptococcus equi subsp. equi (strain 4047) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K R ++ + + S+R GR+N ++LD+I+V+YYG+P L +A I P++ LLI P+DKSS+K IE+A+ +SDLG+TP NDG VIRL +P LT E RKEL+K V K Sbjct: 10 KERFTQSHHSLAREYASIRAGRANASLLDRIQVDYYGAPTPLNQLASITVPEARVLLISPFDKSSIKDIERALNASDLGITPANDGSVIRLVIPALTEETRKELAKEVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STAHJ (Ribosome-recycling factor OS=Staphylococcus haemolyticus (strain JCSC1435) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/112 (49.11%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D KARM ++ID + ++ GR+N +L + V+YYG+P ++ +A IN P++ L+I PYDKSS+ IEKAI +++LG+ P +DGEVIR+T+P LT ERRKEL K V K Sbjct: 7 DTKARMSKSIDNLSRELANISAGRANSNLLSGVTVDYYGAPTPVQQLASINVPEARLLVISPYDKSSVADIEKAIYAANLGVNPTSDGEVIRITVPALTEERRKELVKNVKK 118
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LACCB (Ribosome-recycling factor OS=Lactobacillus casei (strain BL23) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L + PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LACC3 (Ribosome-recycling factor OS=Lactobacillus casei (strain ATCC 334) GN=frr PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 1.453e-25 Identity = 55/110 (50.00%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K M +T + ++ ++R GR+N ++L++I VEYYG+P L +A I P+ L + PYDKSSLK+IE A+ +SDLG+ P NDG+VIRL +PQLT ERRKE++K V K Sbjct: 10 KVNMGKTEESLQRELGNIRAGRANASLLNQITVEYYGAPTPLNQMAAITIPEPRVLQVSPYDKSSLKNIETALNASDLGINPANDGDVIRLVIPQLTGERRKEIAKEVGK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_GEOMG (Ribosome-recycling factor OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=frr PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 52/112 (46.43%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D+KA ME+++D +R + VRTGR+ +LD I+VEYYG+P L +A ++ P+ ++ IQP++ + IEKAI++++LG TP NDG+ IR++LP LT ERRKE+ K + K Sbjct: 8 DMKAHMEKSVDALRREYQKVRTGRATTGLLDDIKVEYYGNPSPLSQVATLSVPEPRTITIQPWEAKLIPVIEKAIMNANLGFTPANDGKTIRISLPPLTEERRKEIVKTLKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_ACIC1 (Ribosome-recycling factor OS=Acidothermus cellulolyticus (strain ATCC 43068 / 11B) GN=frr PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.898e-25 Identity = 52/109 (47.71%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKV 657 + + +ME+ ++ R NF ++RTGR+NPA+ KI VEYYG+P L +A D+ ++I PYDK SL++IEKAI SDLG+ P +DG VIR+ +P LT ERR++ K+ Sbjct: 8 EAEEKMEKATNVARENFAAIRTGRANPALFSKITVEYYGTPTPLNQLASFTVADARLIVIHPYDKGSLRAIEKAIRDSDLGVNPTDDGSVIRVAIPPLTEERRRDYIKM 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LEUCK (Ribosome-recycling factor OS=Leuconostoc citreum (strain KM20) GN=frr PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 53/110 (48.18%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D K+RM+ D ++ S+RTGR+NP +LD+IEVEYYG+ L +A I+ P++ LLI P+DK++L+ I +AI SDLG+ P++DG ++RL +PQ+T E RK+L+K V Sbjct: 7 DAKSRMQGAQDALQRELTSIRTGRANPHILDRIEVEYYGAMTPLNQVASISVPEARVLLITPFDKTALEEIIRAINMSDLGLNPSSDGNIVRLMIPQMTEEGRKDLAKQV 116
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_FUSNN (Ribosome-recycling factor OS=Fusobacterium nucleatum subsp. nucleatum GN=frr PE=3 SV=1) HSP 1 Score: 115.546 bits (288), Expect = 2.479e-25 Identity = 53/113 (46.90%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 + + +M +TI+ V+ F ++R GR+N +MLD I+VE YGS V L I ++ P++ L+I P+DK+ + IEKAI+++++GMTPNNDG VIRL LP+LT++RRKE K+ + Sbjct: 11 ECEEKMVKTIEAVKEKFTAIRAGRANVSMLDGIKVENYGSEVPLNQIGTVSAPEARLLVIDPWDKTLISKIEKAILAANIGMTPNNDGRVIRLVLPELTADRRKEYVKLAKNE 123 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |