CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_ERWT9 (Ribosome-recycling factor OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=frr PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 50/110 (45.45%), Postives = 77/110 (70.00%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RME+ ++ R + + +RTGR++P++LD I V+YYGS L+ +A + DS +L I +D+S ++EKAI++SDLG+ P++ G IR+ LP LT ERRK+L KVV Sbjct: 8 DAETRMEKCVEAFRNHISKIRTGRASPSILDGIMVDYYGSATPLRQLASVTVEDSRTLKINVFDRSIGAAVEKAIMTSDLGLNPSSAGSDIRVPLPALTEERRKDLIKVV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_BURPP (Ribosome-recycling factor OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN) GN=frr PE=3 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 1.964e-22 Identity = 46/109 (42.20%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 +M+R+ID + + + +RTGR++ +LD I+ +YYGSPV + +A + D+ ++ +QP++K ++ +EKAI SDLG+ P G+VIR+ +P LT ERR+EL+KVV + Sbjct: 13 KMQRSIDAFKNDLSKIRTGRAHTGLLDHIQCDYYGSPVPISQVANLTLIDARTIGVQPWEKKMVQVVEKAIRESDLGLNPATQGDVIRVPMPALTEERRRELTKVVKSE 121
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_THERP (Ribosome-recycling factor OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 44/113 (38.94%), Postives = 82/113 (72.57%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 D + RM+++I+++R +R GR+ P++L+ +EV YYG+P L +A I+ P++ L++Q +D++++ ++EKAI S+LG+ P+ DG+ +R+ LP LT ERR++L K+V ++ Sbjct: 8 DAEQRMKKSIELLRQELAGIRAGRAAPSLLEHLEVNYYGTPTPLNQLATISAPEARLLVVQVWDRNAVSAVEKAIRQSELGLNPSVDGQTLRIQLPPLTEERRRQLVKLVHEE 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SODGM (Ribosome-recycling factor OS=Sodalis glossinidius (strain morsitans) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 49/110 (44.55%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RME+ +D +++ + VRTGR++P++LD I+++YYG L+ +A I DS +L I +D++ ++EKAI++SDLG+ P++ G VIR+ LP LT ERR++L KVV Sbjct: 8 DAEIRMEKCVDAFKSHISKVRTGRASPSLLDGIQIDYYGLLTPLRQLANIIAEDSRTLAITVFDRTLAPAVEKAIMASDLGLNPSSAGTVIRVPLPPLTEERRRDLIKVV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_SHEAM (Ribosome-recycling factor OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 48/110 (43.64%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RM + ++ + VRTGR++P++LD I+V YYGS LK + + DS +L + +D+S+++++EKAI+SSDLG+ P + G IR+ LP LT ERR++L KVV Sbjct: 8 DAQDRMGKCVEATKAQMAKVRTGRAHPSLLDTIQVNYYGSMTPLKQVGNVTIEDSRTLAVNVFDRSAIQAVEKAIMSSDLGLNPMSAGATIRIPLPPLTEERRRDLVKVV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_MAGSM (Ribosome-recycling factor OS=Magnetococcus sp. (strain MC-1) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 47/112 (41.96%), Postives = 79/112 (70.54%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D++ RM +++ ++ +VRTGR++ ++LD + V YGS + L +A + P++ + +QP+DK L +IEKAI +DLG+ P+NDG+++R+ LP+LT ERRK+L K+V K Sbjct: 8 DLEQRMNKSLAALKDELATVRTGRASTSLLDAVMVNAYGSMMPLNQVASMTVPEARMINVQPWDKGQLGAIEKAIRDADLGLNPSNDGQIVRVPLPELTEERRKDLVKLVHK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_HAEIN (Ribosome-recycling factor OS=Haemophilus influenzae GN=frr PE=1 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 45/110 (40.91%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RME++++ ++ + + +RTGR+ P++LD I+VEYYG+ L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V Sbjct: 8 DAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_HAEIG (Ribosome-recycling factor OS=Haemophilus influenzae (strain PittGG) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 45/110 (40.91%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RME++++ ++ + + +RTGR+ P++LD I+VEYYG+ L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V Sbjct: 8 DAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_HAEI8 (Ribosome-recycling factor OS=Haemophilus influenzae (strain 86-028NP) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 45/110 (40.91%), Postives = 80/110 (72.73%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D + RME++++ ++ + + +RTGR+ P++LD I+VEYYG+ L+ +A + D+ +L + +D+S + ++EKAI++SDLG+ P++ G IR+ LP LT ERR++L K+V Sbjct: 8 DAQDRMEKSLEALKGHISKIRTGRAQPSLLDAIQVEYYGAATPLRQLANVVAEDARTLAVTVFDRSLISAVEKAILTSDLGLNPSSAGTTIRVPLPPLTEERRRDLIKIV 117
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_EDWI9 (Ribosome-recycling factor OS=Edwardsiella ictaluri (strain 93-146) GN=frr PE=3 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.566e-22 Identity = 50/113 (44.25%), Postives = 78/113 (69.03%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 D + RM++ ++ + N + +RTGR++P +LD I+VEYYG+ L+ +A I DS +L + +D+S +IEKAI++SDLG+ P + G VIR+ LP LT ERRK+L K+V + Sbjct: 8 DAETRMDKCVESFKGNISKIRTGRAHPNLLDGIQVEYYGTATPLRQLANIVAEDSRTLALTVFDRSMSGAIEKAILTSDLGLNPASAGTVIRVPLPPLTEERRKDLIKLVRSE 120 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |