CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_TREPS (Ribosome-recycling factor OS=Treponema pallidum subsp. pallidum (strain SS14) GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.663e-21 Identity = 45/102 (44.12%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 648 +M++++ ++ FN++RT R+ +LD+I V+YY P +L +A ++ P++ ++IQP+DK+ L IE+AI+ S L + P+NDG+VIRL +P LT ERRKEL Sbjct: 10 KMKKSLSALQEGFNTLRTERATAHLLDQITVDYYQQPTALSQVATVSVPEARLIIIQPWDKTLLADIERAILKSKLSLNPSNDGKVIRLVIPPLTQERRKEL 111
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_TREPA (Ribosome-recycling factor OS=Treponema pallidum GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.663e-21 Identity = 45/102 (44.12%), Postives = 74/102 (72.55%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKEL 648 +M++++ ++ FN++RT R+ +LD+I V+YY P +L +A ++ P++ ++IQP+DK+ L IE+AI+ S L + P+NDG+VIRL +P LT ERRKEL Sbjct: 10 KMKKSLSALQEGFNTLRTERATAHLLDQITVDYYQQPTALSQVATVSVPEARLIIIQPWDKTLLADIERAILKSKLSLNPSNDGKVIRLVIPPLTQERRKEL 111
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_RALEJ (Ribosome-recycling factor OS=Ralstonia eutropha (strain JMP134) GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.663e-21 Identity = 47/109 (43.12%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 334 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 V+ +M+++I+ + + VRTGR++ +LD ++V+YYGS V + +A I D+ ++ +QP++K + ++EKAI DLG+ P GEVIR+ +P LT ERRKEL+KVV Sbjct: 10 VEQKMQKSIEAFKADLAKVRTGRAHVGLLDHVQVDYYGSMVPISQVANIGLGDARTITVQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPPLTEERRKELTKVV 118
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_ACIAC (Ribosome-recycling factor OS=Acidovorax avenae subsp. citrulli (strain AAC00-1) GN=frr PE=3 SV=1) HSP 1 Score: 102.834 bits (255), Expect = 1.663e-21 Identity = 45/113 (39.82%), Postives = 79/113 (69.91%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 + +A+M+++I + N +RTGR+NPA+LD ++VEYYGS V L +A ++ D+ ++ +QP++K IEKAI S+LG+ P + G++IR+ +P ++ ERRKE++K+ + Sbjct: 9 NTEAKMDQSIVAFKNNLAKIRTGRANPALLDSVQVEYYGSMVPLSQVANVSLIDARTISVQPWEKGMGAKIEKAIRESELGLNPASMGDLIRVPMPPMSEERRKEMTKLARNE 121
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_RALEH (Ribosome-recycling factor OS=Ralstonia eutropha (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 45/109 (41.28%), Postives = 76/109 (69.72%), Query Frame = 1 Query: 334 VKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 V+ +M+++I+ + + +RTGR++ +LD ++V+YYGS V + +A + D+ ++ +QP++K + ++EKAI DLG+ P GEVIR+ +P LT ERRKEL+KVV Sbjct: 10 VEQKMQKSIEAFKADLAKIRTGRAHTGLLDHVQVDYYGSMVPISQVAAVGLADARTITVQPWEKKMVGAVEKAIRDCDLGLNPATMGEVIRVPMPALTEERRKELTKVV 118
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_PSYA2 (Ribosome-recycling factor OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 46/109 (42.20%), Postives = 77/109 (70.64%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKV 657 D +ARM++T++ + + F+ VRTGR++P ML + V YYGS L +A +N DS +LL+QP+D++ +++I+KAI +DLG+ P +VIR+ +P LT E R+++ K+ Sbjct: 8 DGEARMQKTLEALESTFSKVRTGRAHPGMLSGVMVSYYGSDTPLNQVASVNVEDSRTLLVQPFDRTMVQAIDKAIREADLGLNPMT-ADVIRVPMPALTEETRRDMQKL 115
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_POLSJ (Ribosome-recycling factor OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 44/110 (40.00%), Postives = 75/110 (68.18%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 + + +M++++D + + +RTGR+NP +LD + V+YYGS V + +A ++ D+ ++ + P++K IEKAI SDLG+ P G++IR+ +P +T ERRKEL+KVV Sbjct: 9 NAEQKMQQSVDSFKNSLTKIRTGRANPGLLDTVHVDYYGSMVPISQVANVSLLDARTISVSPWEKGMGAKIEKAIRDSDLGLNPAAQGDLIRVPMPAMTEERRKELTKVV 118
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_METPP (Ribosome-recycling factor OS=Methylibium petroleiphilum (strain PM1) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 47/114 (41.23%), Postives = 78/114 (68.42%), Query Frame = 1 Query: 331 DVKARME----RTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 D+K E R+I+ ++ +RTGR++P +LD++ VEYYGS VS+ +A ++ D+ ++ +QP++K IEKAI SDLG+ P++ GE++R+ +P L ERR++L+KVV Sbjct: 5 DIKKTFEQKSARSIESFKSELQKIRTGRAHPGILDQVHVEYYGSMVSISQVANVSLLDARTISVQPWEKGMGPKIEKAIRESDLGLNPSSQGELLRVPMPALNEERRRDLTKVV 118
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_ERYLH (Ribosome-recycling factor OS=Erythrobacter litoralis (strain HTCC2594) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 42/112 (37.50%), Postives = 77/112 (68.75%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 D++ RM ++ ++++ + +RTGR+N ++LD + VE YG+ + L +A +N P+ L +Q +DK+++ ++EK I ++LG+ P DG+ +RL +P LT ERRKEL+K+ + Sbjct: 8 DIERRMAGAVESLKSDLSGLRTGRANTSLLDPVVVEVYGAMMPLNQVATVNAPEPRMLAVQVWDKANVSAVEKGITKANLGLNPMTDGQTVRLPMPDLTEERRKELAKLAGQ 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_BORT9 (Ribosome-recycling factor OS=Borrelia turicatae (strain 91E135) GN=frr PE=3 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.172e-21 Identity = 47/108 (43.52%), Postives = 74/108 (68.52%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M + + + + + S+RTGR N ++ DK+ V+YYG L +A ++ P++ ++IQP+DKS L IE+AI+SSDL M P++DG V+R+ +P LT ERRKE+ K K Sbjct: 11 KMSKVLLSLESEYKSLRTGRINSSLFDKVLVDYYGEKTPLTRVANVSIPEARLIVIQPWDKSLLSKIEQAILSSDLSMNPSSDGAVLRIKVPVLTVERRKEIVKQAKK 118 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |