CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_DESHY (Ribosome-recycling factor OS=Desulfitobacterium hafniense (strain Y51) GN=frr PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 + + RM + ++ ++ + ++R GR+NP MLDKI VEYYG+ + +A I+ P+ L IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+ Sbjct: 8 EAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKK 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_DESHD (Ribosome-recycling factor OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=frr PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 56/113 (49.56%), Postives = 81/113 (71.68%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 + + RM + ++ ++ + ++R GR+NP MLDKI VEYYG+ + +A I+ P+ L IQP+DKSSL IEKAI+ SDLG+ P++DG VIRL +PQLT+ERR E+ K V K+ Sbjct: 8 EAEDRMVKAVEALKREYATIRAGRANPNMLDKITVEYYGTQTPVNQLANISVPEPRMLTIQPWDKSSLPMIEKAILKSDLGLNPSSDGTVIRLLIPQLTAERRTEIVKTVKKK 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CLOBK (Ribosome-recycling factor OS=Clostridium botulinum (strain Okra / Type B1) GN=frr PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CLOBJ (Ribosome-recycling factor OS=Clostridium botulinum (strain Kyoto / Type A2) GN=frr PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CLOB6 (Ribosome-recycling factor OS=Clostridium botulinum (strain 657 / Type Ba4) GN=frr PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISVPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_BACSU (Ribosome-recycling factor OS=Bacillus subtilis GN=frr PE=1 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.315e-26 Identity = 55/110 (50.00%), Postives = 79/110 (71.82%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K +ME+ I + +VR GR+NP++LDK+ VEYYG+ L ++ IN P++ L+I PYDK+++ IEKAI+ +DLG+TP +DG +IR+ +P LT ERRKEL KVV K Sbjct: 10 KEKMEKAIAAYQRELATVRAGRANPSLLDKVTVEYYGAQTPLNQLSSINVPEARMLVITPYDKTAIGDIEKAILKADLGLTPTSDGNMIRIAIPALTEERRKELVKVVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_THETN (Ribosome-recycling factor OS=Thermoanaerobacter tengcongensis GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 55/113 (48.67%), Postives = 83/113 (73.45%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 D + RM++T++++++ ++R GR+NPA+LD+I V YYG+P L +A I P+ L++QP+D S + IEKAI SDLG+ P +DG+V+RL LP+LT ERRKEL K+V K+ Sbjct: 7 DSEERMKKTLNVLKSELAAIRAGRANPALLDRITVNYYGTPTPLNRLATITAPEPRVLVVQPWDVSQIGEIEKAIQKSDLGINPVSDGKVLRLVLPELTEERRKELVKLVHKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STRU0 (Ribosome-recycling factor OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 R E++ + + S+R GR+N ++LD+I+VEYYG P L +A I P++ LLI P+DKSS+K IE+AI +SDLG+TP NDG VIRL +P LT E RKEL+K V K Sbjct: 12 RFEQSFQSLSREYASIRAGRANASLLDRIQVEYYGVPTPLNQLASITVPEARVLLISPFDKSSIKDIERAINASDLGITPANDGSVIRLVIPALTEETRKELAKEVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_STRMU (Ribosome-recycling factor OS=Streptococcus mutans GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 58/110 (52.73%), Postives = 76/110 (69.09%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 K R E++ + F S+R GR+N ++LD+IEVEYYG P L +A I P++ LL+ P+DKSSLK IE AI +SD+G+ P NDG VIRL +P LT E RKEL+K V K Sbjct: 10 KERFEQSHQSLAREFGSIRAGRANASLLDRIEVEYYGVPTPLNQLASITVPEARVLLVSPFDKSSLKDIEHAINASDIGINPANDGSVIRLVIPALTEETRKELAKEVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_OENOB (Ribosome-recycling factor OS=Oenococcus oeni (strain BAA-331 / PSU-1) GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 57/110 (51.82%), Postives = 78/110 (70.91%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVV 660 +VK RM + + ++R GR+NP +L+KI+VEYYG+P L +A + P++ LLI PYDK+SLK+IE+AI +SDLG+TP NDG IRL +PQLT + RKEL K V Sbjct: 6 EVKERMGKVSKAFQNELINIRAGRANPNILNKIQVEYYGAPTPLNQLASVQIPEARVLLITPYDKTSLKAIEQAIFASDLGLTPQNDGSAIRLIIPQLTEDSRKELVKQV 115 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |