CK939527
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CLOTE (Ribosome-recycling factor OS=Clostridium tetani GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 56/108 (51.85%), Postives = 79/108 (73.15%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M + + ++ + S++ GR+NPAMLDKIE EYYG+ L +A I+ P++ L IQP+DKSSLK+IEKAI+ SDLG+ PNNDG +IRL +P+LT E R+ + K V K Sbjct: 12 KMSKALLALKKDLASLKAGRANPAMLDKIEAEYYGTMTPLSQLANISVPEARILQIQPWDKSSLKAIEKAILVSDLGLNPNNDGTIIRLIIPELTEETRRNIVKTVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_CLOBL (Ribosome-recycling factor OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=frr PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 1.717e-26 Identity = 57/108 (52.78%), Postives = 78/108 (72.22%), Query Frame = 1 Query: 343 RMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 +M +TI ++ S++ GR+NPAMLD+IE EYYGS L + I+ P++ LLIQP+DKS+L +IEKAI+ SDLG+ P+NDG VIRL +P+LT E RK + K V K Sbjct: 12 KMGKTIVALKRELASMKAGRANPAMLDRIEAEYYGSMTPLNQLGNISIPEARVLLIQPWDKSALSAIEKAILKSDLGLNPSNDGTVIRLVIPELTEETRKNIVKTVKK 119
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LISMO (Ribosome-recycling factor OS=Listeria monocytogenes GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKE 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LISMH (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4a (strain HCC23) GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKE 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LISMF (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain F2365) GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKE 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LISMC (Ribosome-recycling factor OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKE 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_BIFAA (Ribosome-recycling factor OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 52/107 (48.60%), Postives = 78/107 (72.90%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKV 657 KA+M ++++ + NF+ +RTGR+NPA+L+ I V+YYG+P LK++A I P+ +L + P+D S ++EKA+ SDLG +P DG VIRLT+P+LT ERRKE K+ Sbjct: 9 KAQMAKSVESTKENFSGIRTGRANPALLNGITVDYYGAPTPLKAVATIGVPEPRTLAVTPFDASQANAVEKALRDSDLGASPRRDGNVIRLTMPELTEERRKEYVKI 115
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_BDEBA (Ribosome-recycling factor OS=Bdellovibrio bacteriovorus GN=frr PE=3 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 2.242e-26 Identity = 57/112 (50.89%), Postives = 80/112 (71.43%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAK 666 + +A+ME+T++ + VRTGR+ +MLD I V YYG+P L +A I+TPD+ S LI P++ + LK IE+AI+ S+LGM P NDG+VIRL +P LT ERRK+L+K V K Sbjct: 9 NAQAKMEKTLNSLSEELKKVRTGRAQVSMLDGIRVNYYGTPSPLSQVASISTPDAKSFLIAPWEVAILKDIEQAIIKSELGMAPMNDGKVIRLKVPDLTEERRKDLAKQVKK 120
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_MYCA9 (Ribosome-recycling factor OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=frr PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 49/108 (45.37%), Postives = 80/108 (74.07%), Query Frame = 1 Query: 331 DVKARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSK 654 D + +ME+ + + R +F ++RTGR+NP M ++ ++YYG+P + +A IN P++ ++I+PY+ + LK+IE AI +SDLG+ P+NDG +IR+ +PQLT ERR+EL K Sbjct: 8 DAEEKMEKAVTVARDDFATIRTGRANPGMFQRVVIDYYGTPTPITQVAGINVPEARMVVIKPYESNQLKAIEDAIRNSDLGLNPSNDGSIIRVAIPQLTEERRRELVK 115
BLAST of CK939527 vs. ExPASy Swiss-Prot
Match: RRF_LISIN (Ribosome-recycling factor OS=Listeria innocua GN=frr PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.929e-26 Identity = 55/111 (49.55%), Postives = 79/111 (71.17%), Query Frame = 1 Query: 337 KARMERTIDMVRTNFNSVRTGRSNPAMLDKIEVEYYGSPVSLKSIAQINTPDSSSLLIQPYDKSSLKSIEKAIVSSDLGMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQ 669 K +ME+ + ++R GR+N ++LD++ V+YYG+ + +A I+ P++ LLI PYDK+ L IEKAI+ SDLG+TPNNDG V+RL++PQLT ERRKEL K V K+ Sbjct: 10 KEKMEKAEQALTRQLGTIRAGRANASLLDRLTVDYYGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSIPQLTEERRKELVKEVKKE 120 The following BLAST results are available for this feature:
BLAST of CK939527 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939527 ID=CK939527; Name=CK939527; organism=Citrus sinensis; type=EST; length=671bpback to top |