CN188238
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOUT (Regulator of ribonuclease activity A OS=Escherichia coli (strain UTI89 / UPEC) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOSM (Regulator of ribonuclease activity A OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOSE (Regulator of ribonuclease activity A OS=Escherichia coli (strain SE11) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOLU (Regulator of ribonuclease activity A OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOLI (Regulator of ribonuclease activity A OS=Escherichia coli (strain K12) GN=rraA PE=1 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOLC (Regulator of ribonuclease activity A OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOL6 (Regulator of ribonuclease activity A OS=Escherichia coli O6 GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOL5 (Regulator of ribonuclease activity A OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECOHS (Regulator of ribonuclease activity A OS=Escherichia coli O9:H4 (strain HS) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160
BLAST of CN188238 vs. ExPASy Swiss-Prot
Match: RRAA_ECODH (Regulator of ribonuclease activity A OS=Escherichia coli (strain K12 / DH10B) GN=rraA PE=3 SV=1) HSP 1 Score: 134.42 bits (337), Expect = 6.741e-31 Identity = 67/161 (41.61%), Postives = 99/161 (61.49%), Query Frame = -1 Query: 131 TAEVCDANPQLIVSGELRALQPIFQIYGRRQVFSGPIVTLKVFEDNVLIREFLEEKGNGRVLVVDGGGSLRCAILGGNPVVQAQNNGWAGIVVNGCIRDVDEINGCDIGVRALASHPMKANKKGIGEKHVPITIGGTRISDGEWLYADTDGILISRAELSV 613 T+E+CD I ++ ++P+F +G R F G I+T+K FEDN L+ + LE+ G GRVLVVDGGGS+R A++ A N W G+V+ G +R VD++ DIG++A+A+ P+ A +GIGE V + GG G+ LYAD GI++S L + Sbjct: 5 TSELCD-----IYQEDVNVVEPLFSNFGGRASFGGQIITVKCFEDNGLLYDLLEQNGRGRVLVVDGGGSVRRALVDAELARLAVQNEWEGLVIYGAVRQVDDLEELDIGIQAMAAIPVGAAGEGIGESDVRVNFGGVTFFSGDHLYADNTGIILSEDPLDI 160 The following BLAST results are available for this feature:
BLAST of CN188238 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 185
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CN188238 ID=CN188238; Name=CN188238; organism=Citrus sinensis; type=EST; length=781bpback to top |