CN188234

Overview
NameCN188234
Unique NameCN188234
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length661
Libraries
Library NameType
Washington Navel Orange Stored Fruit Pulp cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: M3K3_HUMAN (Mitogen-activated protein kinase kinase kinase 3 OS=Homo sapiens GN=MAP3K3 PE=1 SV=2)

HSP 1 Score: 81.6481 bits (200), Expect = 3.859e-15
Identity = 45/131 (34.35%), Postives = 74/131 (56.49%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIE-DVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            ++LG+GAF  VY  +D   G E+A  QV  + D  ++  ++  L  E+ LLK+L+HE I+++Y    D   +T+ +  E    GS++   K +  +     + + RQIL G+ YLHS+   I+HRD+K  N
Sbjct:  366 KLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN--MIVHRDIKGAN 494          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: M3K3_MOUSE (Mitogen-activated protein kinase kinase kinase 3 OS=Mus musculus GN=Map3k3 PE=1 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 1.915e-14
Identity = 44/131 (33.59%), Postives = 73/131 (55.73%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIE-DVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            ++LG+GAF  VY  +D   G E+A  QV  + D  ++  ++  L  E+ LLK+L+HE I+++Y    D   + + +  E    GS++   K +  +     + + RQIL G+ YLHS+   I+HRD+K  N
Sbjct:  366 KLLGQGAFGRVYLCYDVDTGRELASKQVQFDPDSPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKILTIFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSN--MIVHRDIKGAN 494          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: Y9877_DICDI (Serine/threonine-protein kinase DDB_G0283821 OS=Dictyostelium discoideum GN=DDB_G0283821 PE=3 SV=1)

HSP 1 Score: 77.7962 bits (190), Expect = 5.572e-14
Identity = 48/133 (36.09%), Postives = 71/133 (53.38%), Query Frame = 1
Query:  262 QYDEILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            Q  E +GKGAF  V+K  +   G   A  Q  IE  + S  QL  +  E+ LL++L+H NI+KF  S+  +T+R +    E    GSL +  K++       +  +  Q+L+GL YLH     +IHRD+K DN
Sbjct:   14 QIGEAVGKGAFGKVFKALNAETGDFCAIKQ--IEKTIISEKQLPSIIQEIKLLQTLQHPNIVKFIESY--ETSRYLYFALEFIEGGSLAKIAKRYGCFQEPLLSRYFSQVLKGLAYLHEKG--VIHRDIKSDN 140          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: CDC7_SCHPO (Cell division control protein 7 OS=Schizosaccharomyces pombe GN=cdc7 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 7.278e-14
Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            + LGKGAF  VY+G +  +G  VA  +V +  +++S   L  +  E+ LLK+L H NI+K+  S+   TN ++ +I E   +GSLR   K    +    +  +  Q+L+GL YL  HN  +IHRD+K  N
Sbjct:   13 DCLGKGAFGAVYRGLNIKNGETVAVKKVKLSKMLKS--DLSVIKMEIDLLKNLDHPNIVKYRGSY--QTNDSLCIILEYCENGSLRSICKNFGKIPENLVALYTFQVLQGLLYL--HNQGVIHRDIKGAN 136          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: PHO85_DEBHA (Negative regulator of the PHO system OS=Debaryomyces hansenii GN=PHO85 PE=3 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13
Identity = 45/133 (33.83%), Postives = 76/133 (57.14%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKN---VDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            E LG+G + TVYKG +  +G  VA  ++N++    +P    R   E+ L+K L HENI+  Y+  V  T   + ++ E F    L++Y + H N   +D+K +K++  Q+L+G+ + H +   ++HRDLK  N
Sbjct:   12 EKLGEGTYATVYKGRNRTNGQLVALKEINLDSEEGTPSTAIR---EISLMKELDHENIVTLYD--VIHTENKLTLVFE-FMDKDLKKYMEAHGNQGALDLKIVKSFIFQLLKGIMFCHDNR--VLHRDLKPQN 136          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: ANP1_ARATH (Mitogen-activated protein kinase kinase kinase ANP1 OS=Arabidopsis thaliana GN=ANP1 PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 2.118e-13
Identity = 46/134 (34.33%), Postives = 74/134 (55.22%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQ----LERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            +++G+GAF TVY G +   G  +A  QV I     S ++    ++ L  EV LLK+L H NI+++  +  +D   T+N++ E    GS+    +K        ++ + RQ+L GL YLH+H   I+HRD+K  N
Sbjct:   73 QLIGRGAFGTVYMGMNLDSGELLAVKQVLIAANFASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVREDD--TLNILLEFVPGGSISSLLEKFGPFPESVVRTYTRQLLLGLEYLHNH--AIMHRDIKGAN 202          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: JAK1_CYPCA (Tyrosine-protein kinase JAK1 OS=Cyprinus carpio GN=jak1 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.766e-13
Identity = 49/140 (35.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:  256 FLQYDEILGKGAFKTV----YKGFDEVDGIEVAWNQVNIEDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHK-NVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            FL+    LG+G F  V    Y    +  G  VA   +  E+     +Q   L+ E+H+L+ L HENI+K+   W ++  R+I +I E   +GSL++Y  ++K ++D+K + N+A QI +G+  L S N   IHRDL   N
Sbjct:  874 FLKKIRDLGEGHFGKVELCRYDPRGDRTGELVAVKSLKPEN---REEQSSNLWREIHILRELYHENIVKYKGIWHEEGGRSIKLIMEFLPAGSLKEYLPRNKAHIDLKTLLNYAVQICQGMDLLASRN--YIHRDLAARN 1008          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: Y8901_DICDI (Probable serine/threonine-protein kinase DDB_G0278901 OS=Dictyostelium discoideum GN=DDB_G0278901 PE=3 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13
Identity = 46/132 (34.85%), Postives = 71/132 (53.79%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNI--EDVMQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            +I+GKG F  VYKG  +  G   A  ++ I  +  +QS  Q+  L +E++LLK L H NI+++Y      ++  I M  E   +GSL +  K+H  +    +  +  Q+L GL YLH     +IHRD+K  N
Sbjct:   26 DIIGKGGFGVVYKGLHKTKGYFSAIKKIKIMKKKKLQSESQIS-LMAEINLLKVLSHHNIVRYYEHIPSSSHSYIVM--EFIENGSLEKIIKRHGLLPESLVTVYIAQVLNGLEYLHRQG--VIHRDIKAAN 152          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: M3K2_ARATH (Mitogen-activated protein kinase kinase kinase 2 OS=Arabidopsis thaliana GN=ANP2 PE=2 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.717e-13
Identity = 45/134 (33.58%), Postives = 73/134 (54.48%), Query Frame = 1
Query:  271 EILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDVMQSPDQ----LERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            +++G+GAF TVY G +   G  +A  QV I     S ++    ++ L  EV LLK+L H NI+++  +  +D   T+N++ E    GS+    +K        ++ +  Q+L GL YLH+H   I+HRD+K  N
Sbjct:   72 QLIGRGAFGTVYMGMNLDSGELLAVKQVLITSNCASKEKTQAHIQELEEEVKLLKNLSHPNIVRYLGTVRED--ETLNILLEFVPGGSISSLLEKFGAFPESVVRTYTNQLLLGLEYLHNH--AIMHRDIKGAN 201          
BLAST of CN188234 vs. ExPASy Swiss-Prot
Match: M3K1_ARATH (Mitogen-activated protein kinase kinase kinase 1 OS=Arabidopsis thaliana GN=MEKK1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 6.161e-13
Identity = 47/134 (35.07%), Postives = 79/134 (58.96%), Query Frame = 1
Query:  262 QYDEILGKGAFKTVYKGFDEVDGIEVAWNQVNIEDV-MQSPDQLERLYSEVHLLKSLKHENIIKFYNSWVDDTNRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLHYLHSHNPPIIHRDLKCDN 660
            Q  ++LG+G+F +VY+G    DG   A  +V++ D   Q+ + +++L  E+ LL  L+H+NI+++  +  D +N  + +  EL T GSL +  ++++  D   +  + RQIL GL YLH      IHRD+KC N
Sbjct:  334 QKGQLLGRGSFGSVYEGISG-DGDFFAVKEVSLLDQGSQAQECIQQLEGEIKLLSQLQHQNIVRYRGTAKDGSN--LYIFLELVTQGSLLKLYQRYQLRD-SVVSLYTRQILDGLKYLHDKG--FIHRDIKCAN 461          
The following BLAST results are available for this feature:
BLAST of CN188234 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 91
Match NameE-valueIdentityDescription
M3K3_HUMAN3.859e-1534.35Mitogen-activated protein kinase kinase kinase 3 O... [more]
M3K3_MOUSE1.915e-1433.59Mitogen-activated protein kinase kinase kinase 3 O... [more]
Y9877_DICDI5.572e-1436.09Serine/threonine-protein kinase DDB_G0283821 OS=Di... [more]
CDC7_SCHPO7.278e-1436.92Cell division control protein 7 OS=Schizosaccharom... [more]
PHO85_DEBHA2.118e-1333.83Negative regulator of the PHO system OS=Debaryomyc... [more]
ANP1_ARATH2.118e-1334.33Mitogen-activated protein kinase kinase kinase ANP... [more]
JAK1_CYPCA2.766e-1335.00Tyrosine-protein kinase JAK1 OS=Cyprinus carpio GN... [more]
Y8901_DICDI4.717e-1334.85Probable serine/threonine-protein kinase DDB_G0278... [more]
M3K2_ARATH4.717e-1333.58Mitogen-activated protein kinase kinase kinase 2 O... [more]
M3K1_ARATH6.161e-1335.07Mitogen-activated protein kinase kinase kinase 1 O... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS05_0005L10_r Washington Navel Orange Stored Fruit Pulp cDNA Library Citrus sinensis cDNA clone CS_WEb0005L10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CN188234 ID=CN188234; Name=CN188234; organism=Citrus sinensis; type=EST; length=661bp
AGTCCCATCTTTGATGGAATTGCTAGTAATTTTAATTGAATTTTTATATG
ACCTCATGAAATGAATCCTATCTACTGATTATTTGAAGAGCAGGTGGTTT
AATGATTAGGCTGACAGATGGGACTGTTGGTTAGAGATATTTTTGTTTTT
TGTGTAATTTGTGGGGTTACAATAATTGTTTGGTAAATTTGGAGGTTTGT
TGAGTGGATATATATGCTTTTGTTAGACCTAGTGATATGGTCTTTGTTTG
TTTTATTTCTCCAGTATGATGAAATCTTGGGAAAAGGAGCATTCAAGACT
GTATATAAGGGTTTTGATGAAGTTGATGGGATAGAAGTTGCTTGGAATCA
AGTGAATATCGAAGATGTAATGCAGTCACCTGATCAGCTGGAACGATTAT
ATTCGGAGGTTCATCTGTTGAAATCTTTGAAGCATGAAAATATCATCAAG
TTCTATAACTCTTGGGTGGATGATACGAACAGGACTATTAACATGATAAC
TGAGTTATTTACTTCAGGGAGCTTGAGGCAATATCGTAAGAAGCATAAGA
ATGTTGATATGAAGGCCATCAAGAACTGGGCAAGGCAGATTCTTCGAGGT
TTACACTATTTACATAGTCACAATCCTCCTATCATTCACCGGGATCTGAA
ATGTGACAATA
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