EG358190

Overview
NameEG358190
Unique NameEG358190
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length466
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig8110 contig Csv1_Contig8110:45..510. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH2_YEAST (Alcohol dehydrogenase 2 OS=Saccharomyces cerevisiae GN=ADH2 PE=1 SV=3)

HSP 1 Score: 68.9366 bits (167), Expect = 1.190e-11
Identity = 31/81 (38.27%), Postives = 47/81 (58.02%), Query Frame = 2
Query:  200 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCP 439
            ++   V + G+CH+DLH    +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPTKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP 113          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH1_PICST (Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1 PE=3 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 1.190e-11
Identity = 32/82 (39.02%), Postives = 49/82 (59.76%), Query Frame = 2
Query:  200 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPK 442
            ++   V + G+CH+DLH  K +W  +T  P+V GHE  GVV  +GS V+ +++GD  G+  + GSC +C+ C    E  C K
Sbjct:   33 EILINVKYSGVCHTDLHAWKGDWPLDTKLPLVGGHEGAGVVVGIGSNVTGWELGDYAGIKWLNGSCLNCEFCQHSDEPNCAK 114          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH3_EMENI (Alcohol dehydrogenase 3 OS=Emericella nidulans GN=alcC PE=3 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.555e-11
Identity = 33/86 (38.37%), Postives = 49/86 (56.98%), Query Frame = 2
Query:  191 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSK--FKVGDKVGVGCMVGSCHSCDSCAIDLENYCP 439
            G  ++  K+ + G+CH+DLH +K +W   +  P++ GHE  GVV   G  V    FK+GD+ G+  + GSC SC+ C    E  CP
Sbjct:   30 GPDEILVKMRYSGVCHTDLHAMKGDWPLPSKMPLIGGHEGAGVVVAKGELVKDEDFKIGDRAGIKWLNGSCLSCEMCMQADEPLCP 115          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH1_YEAST (Alcohol dehydrogenase 1 OS=Saccharomyces cerevisiae GN=ADH1 PE=1 SV=4)

HSP 1 Score: 68.5514 bits (166), Expect = 1.555e-11
Identity = 30/81 (37.04%), Postives = 47/81 (58.02%), Query Frame = 2
Query:  200 DVTFKVTHCGICHSDLHMIKNEWGNTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCP 439
            ++   V + G+CH+DLH    +W   +  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC +C+ C +  E+ CP
Sbjct:   33 ELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCP 113          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADHA_RHIME (Alcohol dehydrogenase OS=Rhizobium meliloti GN=adhA PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 32/83 (38.55%), Postives = 45/83 (54.22%), Query Frame = 2
Query:  191 GEKDVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC 436
            G   V  K    G+CH+DLH  K +W      P +PGHE VG V ++G++V++ K GD+VGV  +  +C  C  C    E  C
Sbjct:   26 GPGQVLIKYEATGVCHTDLHAAKGDWPVRPNPPFIPGHEGVGYVAKLGAEVTRLKEGDRVGVPWLHTACGCCTPCRTGWETLC 108          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH2_CANAL (Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.463e-11
Identity = 33/80 (41.25%), Postives = 45/80 (56.25%), Query Frame = 2
Query:  200 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC 436
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +KVGD  GV  + GSC +C+ C    E  C
Sbjct:   33 ELLINVKYSGVCHTDLHAWKGDWPLATKLPLVGGHEGAGVVVALGENVKGWKVGDYAGVKWLNGSCLNCEYCQSGAEPNC 112          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: TDH_MARMS (L-threonine 3-dehydrogenase OS=Marinomonas sp. (strain MWYL1) GN=tdh PE=3 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 4.523e-11
Identity = 38/96 (39.58%), Postives = 57/96 (59.38%), Query Frame = 2
Query:  191 GEKDVTFKVTHCGICHSDLHMIK-NEWG-NTI-YPIVPGHEIVGVVTEVGSKVSKFKVGDKV-GVGCMVGSCHSCDSCAIDLENYCPKVIMTYANK 466
            G  DV  K++   IC +D+H+ + ++W  NTI  P+  GHE VGV+TEVG +VS FK+GD+V G G +  +C  C +C     + C K +    N+
Sbjct:   24 GHNDVVIKISKTAICGTDMHIYQWDDWAQNTIPVPMTVGHEFVGVITEVGPEVSGFKIGDRVSGEGHI--TCGHCRNCRAGRRHLCRKTLGVGVNR 117          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH_STAEQ (Alcohol dehydrogenase OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=adh PE=3 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 29/79 (36.71%), Postives = 45/79 (56.96%), Query Frame = 2
Query:  212 KVTHCGICHSDLHMIKNEWGNTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYCPKVI 448
            K  +CG+CH+DLH+   ++G+ +  +  GHE +G V EV   V   KVGD+V +  M  +C +C+ C    E  C  V+
Sbjct:   30 KTEYCGVCHTDLHVKNADFGD-VTGVTLGHEGIGRVIEVADNVDSLKVGDRVSIAWMYAACGNCEYCTTGRETLCRDVL 107          
BLAST of EG358190 vs. ExPASy Swiss-Prot
Match: ADH1_CANAL (Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH1 PE=1 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 5.908e-11
Identity = 32/80 (40.00%), Postives = 45/80 (56.25%), Query Frame = 2
Query:  200 DVTFKVTHCGICHSDLHMIKNEWG-NTIYPIVPGHEIVGVVTEVGSKVSKFKVGDKVGVGCMVGSCHSCDSCAIDLENYC 436
            ++   V + G+CH+DLH  K +W   T  P+V GHE  GVV  +G  V  +K+GD  G+  + GSC SC+ C    E  C
Sbjct:   35 ELLIHVKYSGVCHTDLHARKGDWPLATKLPLVGGHEGAGVVVGMGENVKGWKIGDFAGIKWLNGSCMSCEFCQQGAEPNC 114          
The following BLAST results are available for this feature:
BLAST of EG358190 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 79
Match NameE-valueIdentityDescription
ADH2_YEAST1.190e-1138.27Alcohol dehydrogenase 2 OS=Saccharomyces cerevisia... [more]
ADH1_PICST1.190e-1139.02Alcohol dehydrogenase 1 OS=Pichia stipitis GN=ADH1... [more]
ADH3_EMENI1.555e-1138.37Alcohol dehydrogenase 3 OS=Emericella nidulans GN=... [more]
ADH1_YEAST1.555e-1137.04Alcohol dehydrogenase 1 OS=Saccharomyces cerevisia... [more]
ADHA_RHIME3.463e-1138.55Alcohol dehydrogenase OS=Rhizobium meliloti GN=adh... [more]
ADH2_CANAL3.463e-1141.25Alcohol dehydrogenase 2 OS=Candida albicans GN=ADH... [more]
TDH_MARMS4.523e-1139.58L-threonine 3-dehydrogenase OS=Marinomonas sp. (st... [more]
ADH_STAEQ5.908e-1136.71Alcohol dehydrogenase OS=Staphylococcus epidermidi... [more]
ADH1_CANAL5.908e-1140.00Alcohol dehydrogenase 1 OS=Candida albicans GN=ADH... [more]

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Properties
Property NameValue
Genbank description10h1 Citrus sinensis flesh suppression subtractive hybridization (SSH) cDNA library Moro nucellare 58-8D-I cultivar Citrus sinensis cDNA clone Cl0010h1, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>EG358190 ID=EG358190; Name=EG358190; organism=Citrus sinensis; type=EST; length=466bp
ACGCGGGGATCGCAACTTGTTTGTTCAAATACCCTGGACGTCAAACTAAG
CCAACAAACACCGATATCATTAAATTCATTCTGAAATGGGGCAAGCACCG
GAGCAAGAGCACCCTAAGAACGCCTTTGGATGGGCTGCCAAGGACACTTC
TGGCGTTCTCTCCCCCTTTCACTTCTCCAGAAGAGCAACGGGAGAGAAGG
ATGTGACATTCAAAGTAACTCACTGTGGGATATGCCATTCAGATCTTCAC
ATGATAAAAAATGAATGGGGCAATACCATTTACCCAATCGTCCCCGGACA
TGAGATTGTGGGCGTAGTGACAGAGGTCGGAAGCAAAGTGAGTAAATTCA
AAGTCGGAGACAAAGTGGGAGTAGGATGCATGGTGGGATCATGCCACTCT
TGTGATAGCTGCGCCATTGATCTTGAGAACTACTGTCCCAAAGTTATAAT
GACCTATGCCAACAAG
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