CN188232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBC7_SCHPO (Ubiquitin-conjugating enzyme E2-18 kDa OS=Schizosaccharomyces pombe GN=ubc3 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.081e-20 Identity = 59/152 (38.82%), Postives = 82/152 (53.95%), Query Frame = 2 Query: 167 QRLQKELMSLMMSGGDLGVSAFPEGES-IFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDYRKMVQK 577 +RL KE L +G D G++A P E FTW I+G GT +EG Y +L FP DYP PP +KFE FHPNV + G +C+ IL ++WS ILLS+ S+L EPN ES N A + ++E+Y ++V++ Sbjct: 8 RRLMKEYKELTENGPD-GITAGPSNEDDFFTWDCLIQGPDGTPFEGGLYPATLKFPSDYPLGPPTLKFECEFFHPNVYKDGTVCISILHAPGDDPNMYESSSERWSPVQSVEKILLSVMSMLAEPNDESGANIDACKMWREDREEYCRVVRR 158
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBC1_SCHPO (Ubiquitin-conjugating enzyme E2 1 OS=Schizosaccharomyces pombe GN=ubc1 PE=2 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.635e-20 Identity = 50/134 (37.31%), Postives = 79/134 (58.96%), Query Frame = 2 Query: 164 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNV-DQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAAL-LNNKEDY 559 ++R+ KEL + G+ + + I G G +GT YEG + + + P+DYPF+PP++ F+T +HPNV Q G ICLDIL+D+WS Y ++ L+S+QSLL P P +P ++ A + L N + + Sbjct: 6 SRRIAKELADVQQDK-QAGIQVWTINDDISHLKGMFRGPEGTPYEGGYFVVDIEIPIDYPFRPPKMNFDTKIYHPNVSSQTGAICLDILKDQWSPVYTMKSALISLQSLLCTPEPSNPQDAQVAQVYLQNYQQF 138
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2T_BOVIN (Ubiquitin-conjugating enzyme E2 T OS=Bos taurus GN=UBE2T PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.349e-19 Identity = 49/122 (40.16%), Postives = 73/122 (59.84%), Query Frame = 2 Query: 164 TQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL----QDKWSSAYDCRTILLSIQSLLGEPNPESPL 517 T RL++EL SL+ + G++ + +G+ + I GG T YE +KL +H P YPF+PPQ++F T +HPN+D G ICLD+L + W + + T+L IQ L+ EPNP+ PL Sbjct: 4 TSRLKREL-SLLAAEPPPGITCWQDGDRMEDLRAQILGGANTPYEKGVFKLEVHIPERYPFEPPQIRFLTPIYHPNIDSAGRICLDVLKLPPKGAWRPSLNIATLLTCIQQLMAEPNPDDPL 124
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2U_MACFA (Ubiquitin-conjugating enzyme E2 U OS=Macaca fascicularis GN=UBE2U PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 8.741e-19 Identity = 47/125 (37.60%), Postives = 77/125 (61.60%), Query Frame = 2 Query: 218 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQD--KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQY 583 G++A P E + W IEG + ++++GL ++L++HF +Y + PP VKF T+ FHPNVD + G C+D L + KW++ Y +ILL++Q +L P E+P+N AA +L E + + K + Sbjct: 23 GITARPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFVTIPFHPNVDPHTGQPCIDFLDNPKKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILTKDESLYRTILKLF 147
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2U_HUMAN (Ubiquitin-conjugating enzyme E2 U OS=Homo sapiens GN=UBE2U PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 48/123 (39.02%), Postives = 78/123 (63.41%), Query Frame = 2 Query: 218 GVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQY-GNICLDILQ--DKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED-YRKMVQ 574 G++A P E + W IEG + ++++GL ++L++HF +Y + PP VKF T+ FHPNVD + G C+D L +KW++ Y +ILL++Q +L P E+P+N AA +L E YR +++ Sbjct: 23 GITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPHTGQPCIDFLDNPEKWNTNYTLSSILLALQVMLSNPVLENPVNLEAARILVKDESLYRTILR 145
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_RAT (Ubiquitin-conjugating enzyme E2 S OS=Rattus norvegicus GN=Ube2s PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + + + KE+ +L D G+ FP E + TIEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W++ R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRLVYKEVTTLTADPPD-GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_MOUSE (Ubiquitin-conjugating enzyme E2 S OS=Mus musculus GN=Ube2s PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + + + KE+ +L D G+ FP E + TIEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W++ R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRLVYKEVTTLTADPPD-GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_HUMAN (Ubiquitin-conjugating enzyme E2 S OS=Homo sapiens GN=UBE2S PE=1 SV=2) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + + + KE+ +L D G+ FP E + TIEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W++ R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRLVYKEVTTLTADPPD-GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_BOVIN (Ubiquitin-conjugating enzyme E2 S OS=Bos taurus GN=UBE2S PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + + + KE+ +L D G+ FP E + TIEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W++ R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRLVYKEVTTLTADPPD-GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGANGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBC7_CAEEL (Probable ubiquitin-conjugating enzyme E2 7 OS=Caenorhabditis elegans GN=ubc-7 PE=1 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/148 (35.14%), Postives = 79/148 (53.38%), Query Frame = 2 Query: 173 LQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQD-------------KWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQK 577 L+K+L + D + + I+ W + G T+YEG +K L FP DYP KPP++KF + +HPN+D+ GN+C+ IL D +W + TILLS+ S+L +PN ESP N AA + +E+Y + +K Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKPPKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLTDPNFESPANVDAAKM--QRENYAEFKKK 153 The following BLAST results are available for this feature:
BLAST of CN188232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188232 ID=CN188232; Name=CN188232; organism=Citrus sinensis; type=EST; length=718bpback to top |