CN188232
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UB2SA_XENLA (Ubiquitin-conjugating enzyme E2 S-A OS=Xenopus laevis GN=ube2s-A PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 4.338e-18 Identity = 52/134 (38.81%), Postives = 75/134 (55.97%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + + + KE+ +L D G+ FP E + TIEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W++ R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRLVYKEVTTLTADPPD-GIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGPNGEICVNVLKRDWTAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UB2R2_RABIT (Ubiquitin-conjugating enzyme E2 R2 OS=Oryctolagus cuniculus GN=UBE2R2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 155 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED-------YRKMVQKQYFAGEFES 604 TS + L EL SL + + ++ W I G T+YEG +K + FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + D Y ++++KQ A + E+ Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEA 176
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UB2R2_MOUSE (Ubiquitin-conjugating enzyme E2 R2 OS=Mus musculus GN=Ube2r2 PE=2 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 155 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED-------YRKMVQKQYFAGEFES 604 TS + L EL SL + + ++ W I G T+YEG +K + FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + D Y ++++KQ A + E+ Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEA 176
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UB2R2_HUMAN (Ubiquitin-conjugating enzyme E2 R2 OS=Homo sapiens GN=UBE2R2 PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.666e-18 Identity = 54/170 (31.76%), Postives = 84/170 (49.41%), Query Frame = 2 Query: 155 TSVTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDIL-------------QDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED-------YRKMVQKQYFAGEFES 604 TS + L EL SL + + ++ W I G T+YEG +K + FP+DYP+ PP +F T +HPN+ + G++C+ IL ++W+ + RTILLS+ SLL EPN SP N A+ + D Y ++++KQ A + E+ Sbjct: 7 TSSQKALMLELKSLQEEPVEGFRITLVDESDLYNWEVAIFGPPNTLYEGGYFKAHIKFPIDYPYSPPTFRFLTKMWHPNIYENGDVCISILHPPVDDPQSGELPSERWNPTQNVRTILLSVISLLNEPNTFSPANVDASVMFRKWRDSKGKDKEYAEIIRKQVSATKAEA 176
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_BRAFL (Ubiquitin-conjugating enzyme E2 S OS=Branchiostoma floridae GN=BRAFLDRAFT_259979 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 2 Query: 128 VSSPNTVDTTS--VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKED 556 +S + V+ S + +++ KE++ L + GV FP + I TIEG GT YEG +K+ L D+P PP+ F T FHPNV + G IC++ L+ W + + ILL+I+ LL PNPES LN A LL + D Sbjct: 1 MSGSSNVENLSPQIIRQVAKEVLDLANHPPE-GVKVFPNEQDITDVQATIEGPGGTPYEGGQFKIKLSLGKDFPQTPPKGFFLTKIFHPNVAKNGEICVNTLKKDWKADLGLKHILLTIKCLLIYPNPESALNEEAGKLLLEQYD 144
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBCX_DICDI (Ubiquitin-conjugating enzyme E2 pex4 OS=Dictyostelium discoideum GN=pex4 PE=3 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 48/128 (37.50%), Postives = 72/128 (56.25%), Query Frame = 2 Query: 170 RLQKELMSLMMSGGDLGVSAFPEGES-IFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVD-QYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 547 RL KE L + + +P ES ++ W+ I+G T YE ++L + P +YP +PP +KF T FHPN+ + G ICLD+L+ WS+ Y +++ SI +LL P +SPLN A L+ N Sbjct: 4 RLMKEYKVLQNEEFE-DILLYPRDESDLYRWVAIIKGPPDTPYENGKFELDISVPTNYPLQPPTIKFVTKIFHPNIHFKTGEICLDLLKTSWSAIYTLQSVCRSIIALLSLPEADSPLNCDAGNLIRN 130
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBC21_ARATH (Probable ubiquitin carrier protein E2 21 OS=Arabidopsis thaliana GN=UBC21 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 9.665e-18 Identity = 45/113 (39.82%), Postives = 67/113 (59.29%), Query Frame = 2 Query: 212 DLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVD-QYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNN 547 D + + +IF W I+G T YEG ++L+ P YP +PPQV+F T FHPNV + G ICLDIL++ WS A+ +++ +I +L+ P P+SPLN + LL + Sbjct: 22 DPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPLQPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLNCDSGNLLRS 134
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBE2S_DANRE (Ubiquitin-conjugating enzyme E2 S OS=Danio rerio GN=ube2s PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 51/145 (35.17%), Postives = 77/145 (53.10%), Query Frame = 2 Query: 170 RLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAAALLNNKEDYRKMVQKQYFAGEFES 604 RL + +S + + G+ +P E I +IEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W + R +LL+I+ LL PNPES LN A LL EDY++ + + E + Sbjct: 14 RLVYKEVSALAADPPEGIKIYPSEEDITELHTSIEGPEGTPYAGGVFRMRLVLGKDFPAVPPRGYFLTKIFHPNVGHKGEICVNVLKRDWKAELGLRHVLLTIKCLLIHPNPESALNEEAGKLL--LEDYKEYASRAHLLTEIHA 156
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UBC15_SCHPO (Ubiquitin-conjugating enzyme E2 15 OS=Schizosaccharomyces pombe GN=ubc15 PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 51/151 (33.77%), Postives = 78/151 (51.66%), Query Frame = 2 Query: 167 QRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQ-------------DKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDYRKMVQK 577 Q L+K+L + + + +SIF W I G + T+YEG + +L FP DYP PP++KF T +HPNV G +C+ IL ++W + TIL+S+ S+L PN ESP N AA N ++++K V++ Sbjct: 8 QLLRKQLKEIQKNPPQGFSVGLVDDKSIFEWEVMIIGPEDTLYEGGFFHATLSFPQDYPLMPPKMKFTTEIWHPNVHPNGEVCISILHPPGDDKYGYEDAGERWLPVHSPETILISVISMLSSPNDESPANIDAAKEFRENPQEFKKRVRR 158
BLAST of CN188232 vs. ExPASy Swiss-Prot
Match: UB2SB_XENLA (Ubiquitin-conjugating enzyme E2 S-B OS=Xenopus laevis GN=ube2s-B PE=2 SV=1) HSP 1 Score: 89.7373 bits (221), Expect = 1.649e-17 Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 2 Query: 161 VTQRLQKELMSLMMSGGDLGVSAFPEGESIFTWIGTIEGGKGTMYEGLSYKLSLHFPLDYPFKPPQVKFETMCFHPNVDQYGNICLDILQDKWSSAYDCRTILLSIQSLLGEPNPESPLNSYAA-ALLNNKEDY 559 + +R+ KE+ S + S G+ P E I IEG +GT Y G +++ L D+P PP+ F T FHPNV G IC+++L+ W + R +LL+I+ LL PNPES LN A LL N E+Y Sbjct: 12 IIRRVYKEV-STLTSDPPEGIKIIPNEEDITDVQVNIEGPEGTPYAGGMFRMKLILGKDFPAAPPKGYFLTKIFHPNVSNNGEICVNVLKKDWKAELGIRHVLLTIKCLLIHPNPESALNEEAGRLLLENYEEY 144 The following BLAST results are available for this feature:
BLAST of CN188232 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 230
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Sequences
The
following sequences are available for this feature:
EST sequence >CN188232 ID=CN188232; Name=CN188232; organism=Citrus sinensis; type=EST; length=718bpback to top |