CK939506
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP2_SORBI (Non-specific lipid-transfer protein 2 OS=Sorghum bicolor GN=LTP2 PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.126e-27 Identity = 57/92 (61.96%), Postives = 68/92 (73.91%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 413 A+TCGQV++++ PC+ + R G P CCSGVRSLN AARTT DR+AACNCLK A IRG+ AA +PS+CGV IPY IS STDCSRV Sbjct: 30 AVTCGQVSSAIGPCLSYARGQGSGPSAGCCSGVRSLNSAARTTADRRAACNCLKNAARGIRGLNVGKAASIPSKCGVSIPYTISTSTDCSRV 121
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLLC (Non-specific lipid-transfer protein 1 OS=Solanum lycopersicum GN=TSW12 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.126e-27 Identity = 59/97 (60.82%), Postives = 71/97 (73.20%), Query Frame = 3 Query: 126 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 P A+TCGQVTA LAPC+P+L+ GR P CC GV++L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKNLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP1_SOLPN (Non-specific lipid-transfer protein 1 OS=Solanum pennellii GN=LTP1 PE=3 SV=1) HSP 1 Score: 121.324 bits (303), Expect = 4.083e-27 Identity = 59/97 (60.82%), Postives = 70/97 (72.16%), Query Frame = 3 Query: 126 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 P A+TCGQVTA LAPC+P+L+ GR P CC GV+ L G+A+TT DR+ AC CLK A I+GI N AAG+PS C V IPYKISPSTDCS V+ Sbjct: 20 PHAEALTCGQVTAGLAPCLPYLQ--GRGPLGGCCGGVKGLLGSAKTTADRKTACTCLKSAANAIKGIDLNKAAGIPSVCKVNIPYKISPSTDCSTVQ 114
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP_MAIZE (Non-specific lipid-transfer protein OS=Zea mays PE=1 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.965e-27 Identity = 57/92 (61.96%), Postives = 67/92 (72.83%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 413 AI+CGQV +++APCI + R G P CCSGVRSLN AARTT DR+AACNCLK A + G+ AA +PS+CGV IPY IS STDCSRV Sbjct: 28 AISCGQVASAIAPCISYARGQGSGPSAGCCSGVRSLNNAARTTADRRAACNCLKNAAAGVSGLNAGNAASIPSKCGVSIPYTISTSTDCSRV 119
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP2_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.965e-27 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC+ V+ Sbjct: 27 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 120
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP1_GOSHI (Non-specific lipid-transfer protein OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 6.965e-27 Identity = 58/94 (61.70%), Postives = 71/94 (75.53%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLR-TGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 A+T GQVT SLAPCI +LR +G PP CC+G++SLN AA+TTP RQAAC C+K A I GI +A+GLP +CGV IPYKISPSTDC+ V+ Sbjct: 23 AVTSGQVTNSLAPCINYLRGSGAGAVPPGCCTGIKSLNSAAQTTPVRQAACRCIKSAAAGITGINFGLASGLPGKCGVNIPYKISPSTDCNSVK 116
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP1_LENCU (Non-specific lipid-transfer protein 1 OS=Lens culinaris PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.647e-26 Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 AI+CG V+ +L PC+ +L+ GG P P CC GV+ LNGAARTT DR+AACNCLK + G+I G+KP A LP +CGVR+PY IS ST+C+ +R Sbjct: 26 AISCGTVSGALVPCLTYLK-GGPGPSPQCCGGVKRLNGAARTTIDRRAACNCLKSSAGSISGLKPGNVATLPGKCGVRLPYTISTSTNCNTIR 117
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP4_LENCU (Non-specific lipid-transfer protein 4 (Fragment) OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.857 bits (294), Expect = 4.515e-26 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 18 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVNIPYKISTSTNCNTVK 109
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP6_LENCU (Non-specific lipid-transfer protein 6 OS=Lens culinaris PE=1 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26 Identity = 56/93 (60.22%), Postives = 68/93 (73.12%), Query Frame = 3 Query: 138 AITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRVR 416 AI+CG VT+ L+PC+ +L TGG P P CC GV+ L AA TTPDRQAACNCLK A G+I + N AA LP +CGV IPYKIS ST+C+ V+ Sbjct: 26 AISCGAVTSDLSPCLTYL-TGGPGPSPQCCGGVKKLLAAANTTPDRQAACNCLKSAAGSITKLNTNNAAALPGKCGVDIPYKISTSTNCNTVK 117
BLAST of CK939506 vs. ExPASy Swiss-Prot
Match: NLTP4_ORYSJ (Non-specific lipid-transfer protein 4 OS=Oryza sativa subsp. japonica GN=Os12g0114500 PE=3 SV=2) HSP 1 Score: 117.087 bits (292), Expect = 7.701e-26 Identity = 53/96 (55.21%), Postives = 66/96 (68.75%), Query Frame = 3 Query: 126 PVTNAITCGQVTASLAPCIPFLRTGGRFPPPPCCSGVRSLNGAARTTPDRQAACNCLKRAYGTIRGIKPNVAAGLPSQCGVRIPYKISPSTDCSRV 413 P +A+TCGQV + LAPCI + P CC GVR+LN AA TT DRQ C CLK+ + G++P++ AG+PS+CGV IPY ISPSTDCSRV Sbjct: 23 PAASAVTCGQVVSMLAPCIMYATGRVSAPTGGCCDGVRTLNSAAATTADRQTTCACLKQQTSAMGGLRPDLVAGIPSKCGVNIPYAISPSTDCSRV 118 The following BLAST results are available for this feature:
BLAST of CK939506 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >CK939506 ID=CK939506; Name=CK939506; organism=Citrus sinensis; type=EST; length=635bpback to top |